Sequence details NCBI ID: XM_004874863.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Slc25a1
Gene Name solute carrier family 25 (mitochondrial carrier; citrate transporter), member 1, transcript variant X1
Entrez Gene ID 101723635

Database interlinks

Part of NW_004624945.1 (Scaffold)

For more information consult the page for NW_004624945.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

SLC25A1 ENSCPOG00000001754 (Guinea pig)

Gene Details

solute carrier family 25 (mitochondrial carrier; citrate transporter), member 1

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000001585, Guinea pig)

Protein Percentage 94.86%
CDS Percentage 90.89%
Ka/Ks Ratio 0.08865 (Ka = 0.0314, Ks = 0.3546)

SLC25A1 ENSG00000100075 (Human)

Gene Details

solute carrier family 25 (mitochondrial carrier; citrate transporter), member 1

External Links

Gene Match (Ensembl Protein ID: ENSP00000215882, Human)

Protein Percentage 97.43%
CDS Percentage 91.75%
Ka/Ks Ratio 0.0216 (Ka = 0.0112, Ks = 0.5164)

Slc25a1 ENSMUSG00000003528 (Mouse)

Gene Details

solute carrier family 25 (mitochondrial carrier, citrate transporter), member 1

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000003622, Mouse)

Protein Percentage 93.57%
CDS Percentage 86.6%
Ka/Ks Ratio 0.0401 (Ka = 0.0298, Ks = 0.7435)

Genome Location

Sequence Coding sequence

Length: 1281 bp    Location: 155596..159218   Strand: +
Raw sequence   
>XM_004874863.1
ATGGCCGCGCCCCGCGCCCCCTGTTCTCTGGCAGCCGCTGCGCCCGCGACCGGGAAGGCCAAGCTGACGCACCCCGGGAAGGCAATCCTGGCAGGTGGGCCCCTACGGAACGCCGACCCCTGTCCTGCCTACTCCGCCACGTTTCCGGGAGGTCCGGGGACGCCGAGTTCCCGCCCCGCTTCCGGGTCGGCCTGGGGATTTGGGGTAACTGGGGTGCAGCCCTGGATTCCAGCCGGCGCCGCGATCCAGCCACGAGAATCTTCCAGCACTCCCCATCCGGACCATGAGGTGGGGCCGTGGGACCCGGCCCAGCCTCCTAGCGGTGAAGGCTTTCTGTGCCGAGGGGTGAAGTCCGGGGCGGGGGAGGGGCCCGAGCTGCAGCAGGCGCCCTGGGCCTCCGGGCGGGGCCGTCTCAGAACCCCGATGCCTGTTCCCGCAGGTGGCCTGGCGGGCGGCATCGAGATCTGCATCACGTTCCCGACCGAGTATGTGAAAACTCAATTGCAGCTGGACGAGCGCTCAAATCCGCCGCGATATCGGGGCATCGGGGACTGCGTGCGGCAAACGGTCCGAAGCCATGGTGTCCTGGGCCTGTACCGTGGCCTCAGCTCCCTGCTCTATGGCTCCATCCCCAAGGCGGCTGTCAGGTTTGGAATGTTTGAGTTCCTCAGCAACCACATGCGGGATGCCCAGGGACGGCTGGATAGCACTCGAGGGCTGCTGTGCGGCCTGGGTGCAGGTGTCGCTGAGGCTGTGGTGGTCGTGTGCCCCATGGAGACTATCAAGGTGAAGTTCATCCATGACCAGACCTCCCCCAACCCCAAGTACAGAGGATTCTTCCACGGGGTTAGGGAGATTGTACGGGAGCAAGGACTGAAGGGGACATACCAGGGCCTCACAGCCACTGTACTAAAGCAGGGCTCAAACCAAGCCATCCGCTTCTTCGTCATGACCTCCCTGCGCAACTGGTACCGAGGGGACAACCCCAACAAGCCCATGAATCCGCTAATCACTGGGGTCTTTGGAGCTATTGCGGGCGCAGCCAGTGTCTTTGGGAACACACCTCTGGACGTTATCAAGACCCGGATGCAGGGCCTAGAGGCACACAAATACCGGAACACATGGGACTGTGGCTTGCAGATCCTGAGGAATGAGGGGCTCAGGGCATTCTACAAAGGCACAGTCCCCCGCCTGGGCCGGGTCTGTCTGGATGTGGCCATCGTGTTTGTCATCTATGATGAGGTGGTGAAGCTGCTCAACAAAGTGTGGAAGACAGACTAA

Related Sequences

XP_004874920.1 Protein

Slc25a1 PREDICTED: tricarboxylate transport protein, mitochondrial isoform X1 [Heterocephalus glaber]

Length: 426 aa      
>XP_004874920.1
MAAPRAPCSLAAAAPATGKAKLTHPGKAILAGGPLRNADPCPAYSATFPGGPGTPSSRPASGSAWGFGVTGVQPWIPAGAAIQPRESSSTPHPDHEVGPWDPAQPPSGEGFLCRGVKSGAGEGPELQQAPWASGRGRLRTPMPVPAGGLAGGIEICITFPTEYVKTQLQLDERSNPPRYRGIGDCVRQTVRSHGVLGLYRGLSSLLYGSIPKAAVRFGMFEFLSNHMRDAQGRLDSTRGLLCGLGAGVAEAVVVVCPMETIKVKFIHDQTSPNPKYRGFFHGVREIVREQGLKGTYQGLTATVLKQGSNQAIRFFVMTSLRNWYRGDNPNKPMNPLITGVFGAIAGAASVFGNTPLDVIKTRMQGLEAHKYRNTWDCGLQILRNEGLRAFYKGTVPRLGRVCLDVAIVFVIYDEVVKLLNKVWKTD