Details from NCBI annotation

Gene Symbol Tbpl1
Gene Name TBP-like 1, transcript variant X2
Entrez Gene ID 101708931

Database interlinks

Part of NW_004624942.1 (Scaffold)

For more information consult the page for NW_004624942.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

TBPL1 ENSCPOG00000011899 (Guinea pig)

Gene Details

TBP-like 1

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000010705, Guinea pig)

Protein Percentage 99.39%
CDS Percentage 97.14%
Ka/Ks Ratio 0.01994 (Ka = 0.0027, Ks = 0.1333)

TBPL1 ENSG00000028839 (Human)

Gene Details

TBP-like 1

External Links

Gene Match (Ensembl Protein ID: ENSP00000237264, Human)

Protein Percentage 100.0%
CDS Percentage 96.24%
Ka/Ks Ratio 0.001 (Ka = 0.0002, Ks = 0.1957)

Tbpl1 ENSMUSG00000071359 (Mouse)

Gene Details

TATA box binding protein-like 1

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000114223, Mouse)

Protein Percentage 100.0%
CDS Percentage 94.09%
Ka/Ks Ratio 0.001 (Ka = 0.0003, Ks = 0.3029)

Tbpl1 ENSRNOG00000011114 (Rat)

Gene Details

TBP-like 1 (Tbpl1), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000014805, Rat)

Protein Percentage 100.0%
CDS Percentage 94.44%
Ka/Ks Ratio 0.001 (Ka = 0.0003, Ks = 0.2695)

Genome Location

Sequence Coding sequence

Length: 561 bp    Location: 847921..819099   Strand: -
>XM_004874830.1
ATGGATGCAGACAGTGATGTTGCATTGGACATTTTAATTACAAATGTAGTCTGTGTTTTTAGAACAAGATGCCATTTGAACTTAAGGAAGATTGCATTGGAGGGAGCAAATGTCATTTATAAGCGTGATGTCGGAAAAGTATTAATGAAGCTTAGAAAACCTAGAATTACAGCTACAATTTGGTCCTCAGGAAAAATTATTTGCACTGGAGCAACAAGTGAAGAAGAAGCTAAATTCGGTGCCAGACGTTTAGCCCGCAGTCTGCAGAAACTAGGTTTTCAGGTAATATTTACAGATTTTAAGGTTGTTAACGTTTTGGCTGTTTGTAATATGCCCTTTGAAATCCGTTTGCCAGAATTCACAAAGAACAATAGACCTCATGCCAGTTATGAACCTGAACTTCATCCTGCTGTATGCTATCGGATAAAATCCCTAAGAGCTACATTACAGATTTTTTCAACAGGAAGTATCACAGTAACAGGGCCCAATGTAAAGGCTGTGGCTACCGCTGTGGAACAGATTTACCCATTTGTGTTTGAAAGCAGGAAAGAAATTTTATAA

Related Sequences

XP_004874887.1 Protein

Tbpl1 PREDICTED: TATA box-binding protein-like protein 1 isoform X2 [Heterocephalus glaber]

Length: 186 aa      View alignments
>XP_004874887.1
MDADSDVALDILITNVVCVFRTRCHLNLRKIALEGANVIYKRDVGKVLMKLRKPRITATIWSSGKIICTGATSEEEAKFGARRLARSLQKLGFQVIFTDFKVVNVLAVCNMPFEIRLPEFTKNNRPHASYEPELHPAVCYRIKSLRATLQIFSTGSITVTGPNVKAVATAVEQIYPFVFESRKEIL