Details from NCBI annotation
| Gene Symbol |
Ctsh |
|
Gene Name
|
cathepsin H |
| Entrez Gene ID |
101700582
|
Database interlinks
Part of NW_004624941.1 (SequenceType object (1))
Potential Gene Matches
The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.
Gene Details
cathepsin H
External Links
Gene Match(Ensembl Protein ID:ENSCPOP00000001826, Guinea pig)
| Protein Percentage |
89.22% |
| CDS Percentage |
90.82% |
| Ka/Ks Ratio |
0.23076 (Ka = 0.0588, Ks = 0.2549) |
Gene Details
cathepsin H
External Links
Gene Match(Ensembl Protein ID:ENSP00000220166, Human)
| Protein Percentage |
85.33% |
| CDS Percentage |
85.83% |
| Ka/Ks Ratio |
0.15477 (Ka = 0.0825, Ks = 0.5331) |
Gene Details
cathepsin H
External Links
Gene Match(Ensembl Protein ID:ENSMUSP00000034915, Mouse)
| Protein Percentage |
82.23% |
| CDS Percentage |
83.33% |
| Ka/Ks Ratio |
0.18289 (Ka = 0.1062, Ks = 0.5809) |
Gene Details
cathepsin H (Ctsh), mRNA
External Links
| Protein Percentage |
81.33% |
| CDS Percentage |
83.63% |
| Ka/Ks Ratio |
0.1983 (Ka = 0.1085, Ks = 0.5473) |
Sequence SequenceType object (2)
Length: 1005
bp
Location: 98149..82209
Strand: -
>XM_004874804.1
ATGAGGGCCACGCTGTCCCTGCTCTGCGCCACCTGGCTGCTGGTGTTCCCGGGCCTCCCCGCCGCTGAGCTGCAGCTGAGCACCTTAGAGAATTTTCACTTTAAGTCATGGATGATGCAGCATCAAAAGGAATACAGCACAAAGGAGTACCACCACAGGCAGCAGATATTTGCCAGCAACTGGAGGAAGATCAATGCCCACAACAAGGGGAACCACACATTTAAAATGGCACTGAATCAATTTTCAGACATGAGCTTTGATGAAATAAAACGTAAATATCTTTGGTCAGAGCCCCAGAATTGCTCAGCCACCAAAAGTAACTACTTTCGGGGTACTGGTCCCTACCCAACCTCCGTGGACTGGCGGAAAAAAGGAAATTTTGTCTCAGCGGTGAAAAATCAGGGTGCCTGCGGCAGTTGCTGGACCTTCTCCACCACAGGGGCCCTGGAGTCAGCCGTGGCCATTGCCAGTGGGAAGATGCTGTCTCTGGCCGAGCAGCAGCTGGTGGACTGTGCCCAAGACTTCAACAATCACGGCTGCCAAGGGGGTCTCCCCAGCCAGGCCTTCGAGTACATCCTGTACAACAAGGGCATCATGGGCGAAGACACCTACCCCTACGAGGGCAAGGACGGTCATTGCAGGTTCCAGCCCCAGAAGGCCATTGCGTTTGTCAAAGACATTGTGAACATCACGCTCAATGATGAGGAGGCCATGGTGGAGGCAGTAGCCCTGTACAACCCTGTGAGCTTTGCCTATGAGGTGACCGAAGACTTCATGTCATACAAAAGAGGAATCTACTCCAGTACTTCCTGTCATAAAACTCCAGATAAAGTGAACCACGCAGTACTGGCTGTTGGATACGGAGTAGACCATGGGGTACCCTACTGGATTGTGAAAAACTCCTGGGGCACACAGTGGGGAAACAATGGGTACTTCCTCATCGAGCGTGGGAAGAACATGTGTGGCCTGGCTGCCTGTGCCTCCTACCCCATCCCTCAGGTGTGA
Related Sequences
Ctsh PREDICTED: pro-cathepsin H [Heterocephalus glaber]
Length: 334
aa
View alignments>XP_004874861.1
MRATLSLLCATWLLVFPGLPAAELQLSTLENFHFKSWMMQHQKEYSTKEYHHRQQIFASNWRKINAHNKGNHTFKMALNQFSDMSFDEIKRKYLWSEPQNCSATKSNYFRGTGPYPTSVDWRKKGNFVSAVKNQGACGSCWTFSTTGALESAVAIASGKMLSLAEQQLVDCAQDFNNHGCQGGLPSQAFEYILYNKGIMGEDTYPYEGKDGHCRFQPQKAIAFVKDIVNITLNDEEAMVEAVALYNPVSFAYEVTEDFMSYKRGIYSSTSCHKTPDKVNHAVLAVGYGVDHGVPYWIVKNSWGTQWGNNGYFLIERGKNMCGLAACASYPIPQV