Sequence details NCBI ID: XM_004874772.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Pygb
Gene Name phosphorylase, glycogen; brain, transcript variant X1
Entrez Gene ID 101717341

Database interlinks

Part of NW_004624939.1 (Scaffold)

For more information consult the page for NW_004624939.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

PYGB ENSCPOG00000021215 (Guinea pig)

Gene Details

phosphorylase, glycogen; brain

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000020840, Guinea pig)

Protein Percentage 96.32%
CDS Percentage 91.42%
Ka/Ks Ratio 0.02854 (Ka = 0.016, Ks = 0.561)

PYGB ENSG00000100994 (Human)

Gene Details

phosphorylase, glycogen; brain

External Links

Gene Match (Ensembl Protein ID: ENSP00000216962, Human)

Protein Percentage 94.54%
CDS Percentage 88.93%
Ka/Ks Ratio 0.02505 (Ka = 0.0241, Ks = 0.962)

Pygb ENSMUSG00000033059 (Mouse)

Gene Details

brain glycogen phosphorylase

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000035743, Mouse)

Protein Percentage 94.42%
CDS Percentage 87.19%
Ka/Ks Ratio 0.02545 (Ka = 0.0258, Ks = 1.0135)

Pygb ENSRNOG00000007583 (Rat)

Gene Details

phosphorylase, glycogen; brain (Pygb), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000010158, Rat)

Protein Percentage 94.31%
CDS Percentage 87.15%
Ka/Ks Ratio 0.02669 (Ka = 0.0268, Ks = 1.0041)

Genome Location

Sequence Coding sequence

Length: 2532 bp    Location: 302591..273448   Strand: -
Raw sequence   
>XM_004874772.1
ATGGCGAAGCCGCTGACTGACAGTGAGAGGCGGAAGCAGATCAGCGTGCGCGGCCTGGCGGGGCTGGGCGACGTGGCCGAGGTGCGGAAGAGCTTCAACCGGCATCTACACTTCACGCTGGTCAAGGACCGCAATGTGGCCACTCCGCGCGACTATTACTTCGCGCTGGCGCACACGGTGCGCGACCACTTGGTGGGGCGCTGGATCCGCACGCAGCAGCACTACTACGAGCGCGACCCCAAGCGCATCTACTACCTTTCCCTGGAGTTCTACATGGGCCGCACGCTTCAGAACACCATGGTGAACTTGGGCCTCCAGAACGCGTGTGATGAAGCCATCTATCAGCTGGGGCTGGACTTGGAAGAGCTGGAGGAGATAGAAGAGGACGCCGGCCTGGGGAACGGAGGCCTGGGGCGCCTGGCAGCCTGTTTCCTTGATTCAATGGCCACCCTGGGTCTGGCAGCATATGGCTATGGGATCCGCTACGAGTTTGGGATTTTCAACCAGAAGATCGTCGATGGCTGGCAGGTGGAGGAGGCAGACGACTGGCTGCGCTATGGGAACCCCTGGGAGAAGGCCCGGCCCGAGTACATGCTGCCTGTGCACTTCTATGGGCGTGTGGAGCACACGGCGGAGGGTGTGCGGTGGCTGGACACGCAGGTGGTGCTGGCCATGCCCTATGACACCCCAGTGCCTGGCTACAAGAACAACACCGTCAACACCATGAGGCTCTGGTCCGCCAAGGCACCCAGCGACTTCAAACTGCAGGACTTCAACGTGGGGGACTATATCCAGGCTGTCCTGGACCGGAACCTGGCAGAGAACATCTCCAGGGTGCTGTACCCCAATGACAATTTCTTCGAGGGGAAGGAGCTGCGGCTGAAGCAGGAGTACTTTGTGGTGGCTGCCACACTGCAGGACATCATCCGTCGCTTTAAGTCCTCCAAGTTCGGCTGCCGTGACCCTGTGAGAACCAGTTTTGAGACCTTCCCGGACAAGGTGGCCATCCAGCTGAACGACACCCACCCAGCCCTCTCCATCCCTGAGCTCATAAGGATCCTGGTGGACGTGGAGAAGGTGGATTGGGACAAGGCCTGGGAGATTACCAAGAAGACCTGCGCGTACACCAACCACACGGTGCTGCCTGAGGCTTTGGAGCGCTGGCCAGTGTCACTGTTTGAGAAGCTGCTGCCACGGCACCTAGACATCATCTATGCCATCAACCAGCAGCACCTGGATCACGTGGCCGCCCTGTTTCCTGGGGACGTGGACCGCCTTCGGAGGATGTCCGTGATCGAGGAGGGTGACTGCAAGCGGATCAACATGGCCCACCTGTGTGTGATCGGGTCGCATGCGGTGAACGGCGTGGCACGAATCCACTCTGAGATTGTGAAGCAATCTGTCTTCAAGGATTTCTATGAGCTGGAGCCAGAGAAGTTCCAGAACAAGACCAACGGCATCACCCCCCGCCGGTGGCTGCTGCTGTGCAACCCAGGGCTGGCGGACATCTTTGTGGAGAGAATCGGGGAGAGCTTCCTCACAGACCTCAGCCAGCTGCGGAAGCTGCTACCACTGGTCAGCGATGAAGCCTTCATCAGGGATGTGGCCCAGGTCAAGCAGGAAAATAAGCTGAAGTTCGCTGCCCTCCTGGAGAAGGAGTACAAGGTGAAGATCAACCCCTCTTCCATGTTCGACGTGCACGTGAAGCGTATTCATGAGTACAAGCGTCAGCTGCTCAATTGTCTGCACATCATCACCCTGTACAACCGGATAAAGAAAGACCCGGCTAAGGCCTTCGTACCCAGGACTGTGATGATCGGGGGCAAGGCAGCTCCTGGCTACCACATGGCCAAGATGATCATCAAGCTTGTCACGTCCATCGGCAGTGTTGTCAATCATGATCCAGTTGTGGGTGACAAGCTCCGAGTGATCTTTCTAGAGAACTACCGGGTGTCCCTGGCTGAGAAAGTGATCCCAGCCGCTGACCTGTCACAGCAGATCTCCACTGCAGGCACCGAGGCCTCAGGCACCGGCAACATGAAGTTCATGCTCAACGGGGCACTCACCATTGGCACTATGGATGGTGCCAATGTGGAGATGGCCGAGGAGGCAGGCACTGAGAACCTCTTCATCTTCGGCCTGCGGGTGGAGGAGGTCGAGGCCCTGGACCGAAAAGGGTACAATGCCAGAGAGTACTGTGAGCGCCTGCCTGAGCTAAGGCAGGCCATGGACCAGATCAGCAGCGGCTTCTTTTCCCCCAAGGACCCAGAGTGCTTCAAGGATGTGGTCACCATGCTGATGAACCATGACAGGTTCAAGGTGTTTGCAGACTATGAAGCCTACTTGCAGTGCCAGGCGCAGGTTGAGCAGCTGTACCAGAACCCCAAGGAGTGGACCAAGAAGGTCATCAGGAACATCGCTTGCTCGGGCAAGTTCTCTAGTGACCGAACCATCACGGAGTATGCGAGGGACATCTGGGGTGTGGAGCCCTCTGATCTGCAAATCCCGCCCCCCAACATCCCTAAGGACTAG

Related Sequences

XP_004874829.1 Protein

Pygb PREDICTED: glycogen phosphorylase, brain form isoform X1 [Heterocephalus glaber]

Length: 843 aa      View alignments
>XP_004874829.1
MAKPLTDSERRKQISVRGLAGLGDVAEVRKSFNRHLHFTLVKDRNVATPRDYYFALAHTVRDHLVGRWIRTQQHYYERDPKRIYYLSLEFYMGRTLQNTMVNLGLQNACDEAIYQLGLDLEELEEIEEDAGLGNGGLGRLAACFLDSMATLGLAAYGYGIRYEFGIFNQKIVDGWQVEEADDWLRYGNPWEKARPEYMLPVHFYGRVEHTAEGVRWLDTQVVLAMPYDTPVPGYKNNTVNTMRLWSAKAPSDFKLQDFNVGDYIQAVLDRNLAENISRVLYPNDNFFEGKELRLKQEYFVVAATLQDIIRRFKSSKFGCRDPVRTSFETFPDKVAIQLNDTHPALSIPELIRILVDVEKVDWDKAWEITKKTCAYTNHTVLPEALERWPVSLFEKLLPRHLDIIYAINQQHLDHVAALFPGDVDRLRRMSVIEEGDCKRINMAHLCVIGSHAVNGVARIHSEIVKQSVFKDFYELEPEKFQNKTNGITPRRWLLLCNPGLADIFVERIGESFLTDLSQLRKLLPLVSDEAFIRDVAQVKQENKLKFAALLEKEYKVKINPSSMFDVHVKRIHEYKRQLLNCLHIITLYNRIKKDPAKAFVPRTVMIGGKAAPGYHMAKMIIKLVTSIGSVVNHDPVVGDKLRVIFLENYRVSLAEKVIPAADLSQQISTAGTEASGTGNMKFMLNGALTIGTMDGANVEMAEEAGTENLFIFGLRVEEVEALDRKGYNAREYCERLPELRQAMDQISSGFFSPKDPECFKDVVTMLMNHDRFKVFADYEAYLQCQAQVEQLYQNPKEWTKKVIRNIACSGKFSSDRTITEYARDIWGVEPSDLQIPPPNIPKD