Details from NCBI annotation

Gene Symbol Trim11
Gene Name tripartite motif containing 11, transcript variant X1
Entrez Gene ID 101720330

Database interlinks

Part of NW_004624937.1 (Scaffold)

For more information consult the page for NW_004624937.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

TRIM11 ENSCPOG00000004431 (Guinea pig)

Gene Details

tripartite motif containing 11

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000003999, Guinea pig)

Protein Percentage 94.23%
CDS Percentage 90.88%
Ka/Ks Ratio 0.04918 (Ka = 0.0255, Ks = 0.5184)

TRIM11 ENSG00000154370 (Human)

Gene Details

tripartite motif containing 11

External Links

Gene Match (Ensembl Protein ID: ENSP00000284551, Human)

Protein Percentage 91.88%
CDS Percentage 87.82%
Ka/Ks Ratio 0.03997 (Ka = 0.0365, Ks = 0.913)

Trim11 ENSMUSG00000020455 (Mouse)

Gene Details

tripartite motif-containing 11

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000090749, Mouse)

Protein Percentage 87.79%
CDS Percentage 83.94%
Ka/Ks Ratio 0.05045 (Ka = 0.0597, Ks = 1.1834)

Trim11 ENSRNOG00000002915 (Rat)

Gene Details

tripartite motif-containing 11 (Trim11), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000039974, Rat)

Protein Percentage 84.86%
CDS Percentage 80.13%
Ka/Ks Ratio 0.06819 (Ka = 0.0865, Ks = 1.2691)

Genome Location

Sequence Coding sequence

Length: 1407 bp    Location: 1109027..1100297   Strand: -
>XM_004874729.1
ATGGCCACCCCCGACCTGTCCACCAACCTCCAGGAGGAGGCCACCTGCGCCATCTGCCTCGACTACTTCACCGACCCCGTGATGACCGACTGCGGCCACAACTTCTGCCGCGAGTGCATCGGGCGCTGCTGGGGCCAGCCCGAGGGCCCCTACGCGTGCCCCGAGTGTCGCGAGCTGTCCCCGCAGAGCAACCTGCGCCCCAACCGCCCGCTGGCCAAGATGGCCGAGATGGCGCGGCGCCTGCACCCGCCGTCTCCGGTCCCGCAGGGCGTGTGCGCCGCGCACCGGGAGCCGCTGGCCGCCTTCTGCGCCGACGAACTGCGCCTGCTGTGCGCCGCCTGCGAGCGCGCGGGCGAGCACTGGGCGCACCGCGTGAGGCCGCTGCAGGACGCGGCCGAGGAGCTCAAGGGAAGGCTGGAGAAGTCTCTAGAGCACCTGCGGAGACAGATGGAGGATGCACTGCTGTTCCAAGCCCAGGCAGAGGAAACCTGCGCCTTGTGGCAGAAGATGGTGGAGACCCAGCGGCAGAACATGCTTGGCGAATTCGAGCGTCTGCGTCGCCTCCTTGCTGAGGAGGAACAGCAGCTGCTACAGAGGCTGGAGGAAGAAGAACTAGAGGTGCTGCCCAGGTTGCGGGAGGGTGCTGTGCGCCTCAGCCAGCAGAGCGCCCAGCTGGCCACGCTCATTGCTGAGCTGGAGGCCCGCTGCCAGCTGCCTGCACTGGGGCTGCTGCAGGACATTAAGGATGCCTTGCGCAGGGTACAGGATGTGAAGCTCCAGCCCCCAGAGGTGGTGCCTATGGAGCTGAGGACCGTGTGCAGAGTGCCAGGGCTGGTGGAGACTCTGCGGAGGTTTCGAGGTGATGTGACCCTGGACCCAGACACCGCCAACCCCGAGCTGGTCCTCTCCGAGGACAGGAGGAGTGTGCAGCGAGGTGACCTCCGGCAGGCTCTTCCCGACAGCCCGGAGCGCTTCGACCCCGGACCCTGTGTACTGGGCCAGGAGCGCTTCACCTCAGGCCGCCACTACTGGGAGGTGGAGGTTGGAGACCGCAGCAGCTGGGCCCTGGGCGTGTGCAGGGACAACGTCAACCGAAAGGAGAAGGGCGAGCTGTCAGCCAGCAACGGCTTCTGGATCCTGGTGTTCTTAGGCAGCTACTACTCCTCCTCCAAGCGGGCCTTCTCCCCAATGCGGGACCCACCCAGGCGTGTGGGCATCTTCCTGGACTATGAGGCTGGACACCTCTCTTTCTACAGTGTGACAGACGGCTCGCTCCTGTTCACCTTCCCCGAGACAACCTTCTCTGGCACACTGCGGCCCCTCTTCTCGCCTCTGTCGAGCAGCCCAACCCCGCTGACCATCTGCCGGCTGAAAGGTGGGCCCGGGGACGCCCTGGCTCCCCAGTGA

Related Sequences

XP_004874786.1 Protein

Trim11 PREDICTED: E3 ubiquitin-protein ligase TRIM11 isoform X1 [Heterocephalus glaber]

Length: 468 aa      View alignments
>XP_004874786.1
MATPDLSTNLQEEATCAICLDYFTDPVMTDCGHNFCRECIGRCWGQPEGPYACPECRELSPQSNLRPNRPLAKMAEMARRLHPPSPVPQGVCAAHREPLAAFCADELRLLCAACERAGEHWAHRVRPLQDAAEELKGRLEKSLEHLRRQMEDALLFQAQAEETCALWQKMVETQRQNMLGEFERLRRLLAEEEQQLLQRLEEEELEVLPRLREGAVRLSQQSAQLATLIAELEARCQLPALGLLQDIKDALRRVQDVKLQPPEVVPMELRTVCRVPGLVETLRRFRGDVTLDPDTANPELVLSEDRRSVQRGDLRQALPDSPERFDPGPCVLGQERFTSGRHYWEVEVGDRSSWALGVCRDNVNRKEKGELSASNGFWILVFLGSYYSSSKRAFSPMRDPPRRVGIFLDYEAGHLSFYSVTDGSLLFTFPETTFSGTLRPLFSPLSSSPTPLTICRLKGGPGDALAPQ