Sequence details NCBI ID: XM_004874665.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Lrp8
Gene Name low density lipoprotein receptor-related protein 8, apolipoprotein e receptor
Entrez Gene ID 101708688

Database interlinks

Part of NW_004624934.1 (Scaffold)

For more information consult the page for NW_004624934.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

LRP8 ENSCPOG00000011514 (Guinea pig)

Gene Details

low density lipoprotein receptor-related protein 8, apolipoprotein e receptor

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000010355, Guinea pig)

Protein Percentage 82.68%
CDS Percentage 85.57%
Ka/Ks Ratio 0.30998 (Ka = 0.1134, Ks = 0.3658)

LRP8 ENSG00000157193 (Human)

Gene Details

low density lipoprotein receptor-related protein 8, apolipoprotein e receptor

External Links

Gene Match (Ensembl Protein ID: ENSP00000303634, Human)

Protein Percentage 87.4%
CDS Percentage 87.75%
Ka/Ks Ratio 0.20697 (Ka = 0.0777, Ks = 0.3753)

Lrp8 ENSMUSG00000028613 (Mouse)

Gene Details

low density lipoprotein receptor-related protein 8, apolipoprotein e receptor

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000102343, Mouse)

Protein Percentage 89.75%
CDS Percentage 88.44%
Ka/Ks Ratio 0.12035 (Ka = 0.0527, Ks = 0.4378)

Lrp8 ENSRNOG00000013064 (Rat)

Gene Details

Protein Lrp8

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000017575, Rat)

Protein Percentage 88.82%
CDS Percentage 87.9%
Ka/Ks Ratio 0.13771 (Ka = 0.0591, Ks = 0.4294)

Genome Location

Sequence Coding sequence

Length: 2610 bp    Location: 1146000..1215922   Strand: +
Raw sequence   
>XM_004874665.1
ATGGGCCGCCGGGAGCGGGGCGCGCTCCGGCCGCTGCTGCTCCTGCTCCTCCTGGTGCTGCAGCATCTCGCGGCGGCGGCGGATCCGGCGCGCGGCGGCCAAGGGCCGGTCAAGGAGTGTGAAAAGGACCAGTTCCGGTGTCGGAACGAGCGCTGCATCCCCTTGGTGTGGAGATGTGACGAGGACGACGACTGCTCGGACAACAGCGACGAGGACGACTGCCCCAAGAAGACGTGTGCGGACAGCGACTTCACCTGCGGCAACGGCCACTGCATCCCTGAGCGGTGGAAGTGTGATGGTGAGGAGGAGTGTCCCGACGGCTCCGACGAGTCTGAGGCCACCTGCACCCAGCAAGTGTGTCCTGCAGAGAAGCTGAGCTGTGGACCCACCAGCCACAAGTGTGTGCCTGCCTCGTGGCGCTGCGACGGAGAGAAGGACTGTGAGGGTGGAGCAGACGAGGCCGGCTGTGCTACCTCAGTGCTGGGGACCTGCCGTGGAGAGGAGTTCCAGTGTGGGGATGGGACTTGTGTCCTTGCAATCAAACGCTGCAACCAGGAACGGGACTGCCCAGACGGGAGCGACGAAGCCGGCTGCCTGCAGGAGTCCACTTGTGAGGGTCCCCGCAGATTTCAGTGTAAGAGTGGCGAGTGCGTGGACGGCGGGAAAGTGTGTGATGCTCAAAAGGACTGCCAGGACTGGTCAGATGAGCTTCTGAAAGAGTGTGGACTGAATGAGTGTCTGCACAACAATGGCGGCTGTTCCCACATCTGCACTGACCTCAAGAAGGGCTTTGAGTGCTCGTGCCCGGCAGGCCTCCGTCTTCTGGATCAGAAGACCTGTGTTGACATAGACGAGTGTGAGGACCCAGACGCTTGCAGCCAGATCTGTGTAAATTACAAAGGGTACTTTAAGTGCGAGTGCCACCCTGGCTACGAGGTGGACACACTGACCGAGAGCTGCAAGGCTGTGGCTGGCAAGAGCCCATCCCTAATCTTTACCAACCGGCACGAGGTACGGAGGATAGACCTGGTGAAGCGGGATTACTCACGCCTCATCCCTATGCTCAAGAATGTTGTGGCACTGGATGTGGAGGTTGCCACCAATCGCATCTACTGGTGTGACCTCTCCTACCGCAAGATCTACAGCGCCAACATGGACAAGGCCAGCGACCCAGCAGACCAGGAGGTCCTCATTGATGAGCAGCTGCACTCTCCAGAGGGCCTGGCAGTGGACTGGGTCCACAAACATATCTACTGGACAGACTCGGGTAATAAGACCATCTCAGTGGCCACACTTGATGGTCACCGCCGATGCACTCTCTTCAGCCGTGACCTCAGTGAACCCCGGGCTATTGCTGTTGACCCCCTGCGAGGGTTCATGTATTGGTCTGACTGGGGGTACCAGGCCAAGATCGAGAAGTCTGGGCTCAACGGTGTGGACCGGCAAACACTGGTGTCAGACAATATTGAATGGCCCAACGGAATTGCCCTGGATTTGCTGAACCAGCGTTTGTACTGGGTGGACTCCAAGCTACACGAGCTGTCCAGCATTGACTTCAGTGGCGGCAACAGAAAGATGCTGATTTTTTCCCCTGATTTCCTGAGCCACCCTTTTGGGATAGCTGTGTTTGAGGACAAGGTATTCTGGACAGACCTGGAGAATGAGGCCATTTTCAGTGCAAATCGGCTTAATGGACTAGAAATCTCCATCCTAGCTGAGAACCTGAATAACCCACATGACATTGTCATCTTCCATGAGCTGAAGCAGCCAAGAGCTGAAGATGCCTGTGAGCTGAATGCCCAGCCCAATGGAGGCTGTGAATACCTGTGCCTTCCTGCTCCTCAGATATCCAGCCACTCTCCCAAGTACACATGTGCCTGTCCTGACACGATGTGGCTGGGCCCAGACACGAAGAGGTGCTACCGAGCACCTCCATCTACCTCAACTACGACTTTAGCTTCTACTACGACAAGGACAGCAGCTGCCACCACGAGAGTCCCTGGAACCACTGTCCCCAGCTCCACCTACCAGAACCACACCACAGAGACACCAAGCCTGACAGCTGCAGTCCCAAGCTCAGCTAGTGTCCCCAGGGCTCCCAGCATCAGCCCGTCTACCCTAAGCCCTGCAACCAGCAACCACTCCCAGCACTATGGAAATGAAGGTGGCAAGATGGGCTCAACCGTCACTGCTGCTGTCATTGGGATCATTGTGCCCATAGCGGTAATAGCGCTGCTGTGCTTGAGTGGCTACCTGATCTGGAGAAACTGGAAGCGGAAGAACACCAAGAGCATGAATTTTGACAACCCAGTCTATAGGAAAACAACAGAAGAAGAAGATGAAGATGAGCTCCATATAGGGAGGACTACTCAGATTGGCCATGTCTACCCTGCAGCAATCAGAAGCTTTGATCGCCCACTGTGGGCAGAGCCCTGTCTTGGGGAGACCAGAGAACTGGAAGACCCAGCCCCTGCCCTCAAGGAGCTTTTTGTCTTGCCGGGGGAACCAAAGTCACAGCTGCACCAACTCCCGAAGAACCCTCTTTCCGAGCTGCCTGTCGTCAAGTGCAAGCGAGTGGCATTAAGCCTTGAAGATGATGGACTGCCCTGA

Related Sequences

XP_004874722.1 Protein

Lrp8 PREDICTED: low-density lipoprotein receptor-related protein 8 [Heterocephalus glaber]

Length: 869 aa      View alignments
>XP_004874722.1
MGRRERGALRPLLLLLLLVLQHLAAAADPARGGQGPVKECEKDQFRCRNERCIPLVWRCDEDDDCSDNSDEDDCPKKTCADSDFTCGNGHCIPERWKCDGEEECPDGSDESEATCTQQVCPAEKLSCGPTSHKCVPASWRCDGEKDCEGGADEAGCATSVLGTCRGEEFQCGDGTCVLAIKRCNQERDCPDGSDEAGCLQESTCEGPRRFQCKSGECVDGGKVCDAQKDCQDWSDELLKECGLNECLHNNGGCSHICTDLKKGFECSCPAGLRLLDQKTCVDIDECEDPDACSQICVNYKGYFKCECHPGYEVDTLTESCKAVAGKSPSLIFTNRHEVRRIDLVKRDYSRLIPMLKNVVALDVEVATNRIYWCDLSYRKIYSANMDKASDPADQEVLIDEQLHSPEGLAVDWVHKHIYWTDSGNKTISVATLDGHRRCTLFSRDLSEPRAIAVDPLRGFMYWSDWGYQAKIEKSGLNGVDRQTLVSDNIEWPNGIALDLLNQRLYWVDSKLHELSSIDFSGGNRKMLIFSPDFLSHPFGIAVFEDKVFWTDLENEAIFSANRLNGLEISILAENLNNPHDIVIFHELKQPRAEDACELNAQPNGGCEYLCLPAPQISSHSPKYTCACPDTMWLGPDTKRCYRAPPSTSTTTLASTTTRTAAATTRVPGTTVPSSTYQNHTTETPSLTAAVPSSASVPRAPSISPSTLSPATSNHSQHYGNEGGKMGSTVTAAVIGIIVPIAVIALLCLSGYLIWRNWKRKNTKSMNFDNPVYRKTTEEEDEDELHIGRTTQIGHVYPAAIRSFDRPLWAEPCLGETRELEDPAPALKELFVLPGEPKSQLHQLPKNPLSELPVVKCKRVALSLEDDGLP