Sequence details NCBI ID: XM_004874664.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Glis1
Gene Name GLIS family zinc finger 1
Entrez Gene ID 101708114

Database interlinks

Part of NW_004624934.1 (Scaffold)

For more information consult the page for NW_004624934.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

GLIS1 ENSCPOG00000009497 (Guinea pig)

Gene Details

GLIS family zinc finger 1

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000008524, Guinea pig)

Protein Percentage 88.73%
CDS Percentage 89.81%
Ka/Ks Ratio 0.17404 (Ka = 0.0574, Ks = 0.3299)

GLIS1 ENSG00000174332 (Human)

Gene Details

GLIS family zinc finger 1

External Links

Gene Match (Ensembl Protein ID: ENSP00000309653, Human)

Protein Percentage 84.23%
CDS Percentage 86.34%
Ka/Ks Ratio 0.14779 (Ka = 0.0784, Ks = 0.5303)

Glis1 ENSMUSG00000034762 (Mouse)

Gene Details

GLIS family zinc finger 1

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000035650, Mouse)

Protein Percentage 81.23%
CDS Percentage 83.08%
Ka/Ks Ratio 0.16964 (Ka = 0.1052, Ks = 0.6202)

Glis1 ENSRNOG00000000138 (Rat)

Gene Details

GLIS family zinc finger 1 (Predicted), isoform CRA_a; Protein Glis1

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000036043, Rat)

Protein Percentage 82.67%
CDS Percentage 83.06%
Ka/Ks Ratio 0.15002 (Ka = 0.0992, Ks = 0.6611)

Genome Location

Sequence Coding sequence

Length: 2364 bp    Location: 751476..950345   Strand: +
Raw sequence   
>XM_004874664.1
ATGCACTGCGAGGTGGCCGAGGCGCTTTCGGACAAGAGGCCCAAGGAGGCCCCAGCTGCGCCCGGCCCCGGCCGCGGGCCCGCCGGCCTCAGCGCGCACATGGCCTTCAGGGTCACCGCGAGTGGCGGCGGCTGTGGGGACGGGGGCCCTCGGGACCTGCACCCTCGGCTGCCCGTGCCACCGCTGCGCGCCCACGACCACCTCCGGCCCCGGAGTCCGCGAGACTACAGCCAGTCCAAGGCTGCCGCCGCCGCAGCAGCCGGGAAGGTGAACGGGAGCTACGGCCACTGCACCCCCGGGTCGGAAAAGGGCCTGCTGGACCTGGACCTTGCTGAGGGCCCCGGCCTGTTTCTCCCTGTGGGAACCCCACCACCCCGGGGCCACACCCCTGCCTGCGAGAGGCTGCTGCATCTCCCCCCCCCTCACAGGTCACCCAGGCCCCAGGCCGCCTATGTGAATGGCAGCCTGCCAGCCACACAGCACATCAAGCAGGAGTCCCTGCCCGACTACCAGGCCATGGCCGAAGCCCACACTCCCCTGTCAACCCACTGCCGCGCCCCGCCAGCCACAGGCCTGCACACAGCGCTGGACCTCCCAGGCCGAGGCCTTGCCAACCCTGCCCCTTCCTGCTACCTTCTGGGCAGCGAGCCTAGCCCAGGCCTGGGCCCCCAGCCTGAAGCCCACCTGCCCGAGGGCAGCCTGAAGCGCTGCTGCCTCTTGGGCCTGCCTCCTGTCTCCTCAGCCTCCTCCTCACCTTGTGGCTCCTCCGATGTCACCCCTATCATCCACTCCTCCCAGACGGCTCTAGTCTCCTGTGTAAATGGACTCCAGAGCCCCCCTCTGCCGGGAGATGTCGGGGGCCCTCCTAAGCAGTCCCGGCACGGCCCTGTGCCCACTGAGAGCCAGGAGGGCAGCATGCAGCTGGAAGAGTGCCAGAAGACGGGCTTCCTGAAGCAGGAGCCTTCGGACGAATTCTCAGAGCTCTTTGGGACTCACCAGCAGGGCCTGCCACCCCCCTACCCCCTGCCTCAGTTGCCAGCTGGCCTGGGTCTGGCAGGTCTGGGGCTGGGCCTGGCGGGCAGGCTGGTGGCTGGGCGGCAGGCATGCCGCTGGGTGGACTGCTGTGCAGCATACGAGCAACAGGAGGAGCTGGTGCGGCACATTGAGAAGAGCCACATAGACCAGCGCAAGGGCGAGGACTTCACCTGCTTCTGGGCCGGATGTGTGCGCCGCTACAAGCCCTTCAATGCCCGCTACAAGCTGCTCATCCACATGAGGGTGCACTCGGGTGAGAAGCCCAACAAGTGCATGTTTGAAGGCTGCAGCAAAGCCTTCTCGAGGCTGGAGAACCTCAAGATCCATCTGAGGAGCCACACGGGTGAGAAGCCATACCTGTGCCAGCACCCGGGCTGCCAGAAGGCCTTCAGCAACTCCAGTGACCGCGCCAAGCACCAGCGCACCCACCTGGACACGAAGCCGTATGCTTGCCAGATCCCTGGGTGCTCCAAGCGCTACACGGACCCCAGCTCCCTCCGCAAACACGTGAAGGCCCACTCAGCCAAAGAGCAGCAGGTGCGTAAGAAGTTGCATGCCAGCCCTGACACCGAGGCTGACGTCCTGACGGAGTGTCTGGCCCTGCAGCAGCTCCATGCATCTGCACAGCTGGCTGGTGGTGATGGGAAGGGTGGACACCTGGGCCAGGAGCTGCTCCCAGGTGTGTACCCAGGCTCCGTCACCCCCCATAACGGGCTCTCCTCAGGCCTCCTGCTCCCTGCCCAGGATGTCCCCTCCCGGCACCACCCACTGGACAACGCTGCCGGTCCCCAGCACCATTTGTCCCCTCTGCCTGCGGCCGAGGGCAGCAGGGATGGGTTGGGGCCCGGCCTCCTCTCTCCCATGCTCAGCCCGCTGAAGGGGCTCGGGCCACCACCGCTGCCACCGTCCTCCCAGAGCCAGCCTCCAGGGACCCAGCCCTTCTCTGCGCTGCCCAGCAAGCCGCCCTACACCCCCTTCCAGAGCCCCCCACCCCCACCACTGCCCGGCCCACAAGGCTACCAGGGCAGCTTCCACTCCATCCAGAGCTGCTTCCCCTACAGCAACTGCTTCCGGAGTGGTGAGCCAGCAGCCAGCGGGGACGGGCTGGCCGGGGAGGCCCCCGGCTTCACCCAGCTGCGGCCCAATGGCTACCCCAGCCTCAGCGCACCTTTACCTGCCTCAGGCTACGAGGCCCCGTGCCCCACAGCGCTACCCCCACAGTCATCTGAAGATGTGGCGTCCGGTGGCCCTGAGGACTGCAGCTTCTTCTCCAATGGCGCCTTTGACCACTGTCTGAGTCACATCCCCTGCATCTACACAGACACCTGA

Related Sequences

XP_004874721.1 Protein

Glis1 PREDICTED: zinc finger protein GLIS1 [Heterocephalus glaber]

Length: 787 aa      View alignments
>XP_004874721.1
MHCEVAEALSDKRPKEAPAAPGPGRGPAGLSAHMAFRVTASGGGCGDGGPRDLHPRLPVPPLRAHDHLRPRSPRDYSQSKAAAAAAAGKVNGSYGHCTPGSEKGLLDLDLAEGPGLFLPVGTPPPRGHTPACERLLHLPPPHRSPRPQAAYVNGSLPATQHIKQESLPDYQAMAEAHTPLSTHCRAPPATGLHTALDLPGRGLANPAPSCYLLGSEPSPGLGPQPEAHLPEGSLKRCCLLGLPPVSSASSSPCGSSDVTPIIHSSQTALVSCVNGLQSPPLPGDVGGPPKQSRHGPVPTESQEGSMQLEECQKTGFLKQEPSDEFSELFGTHQQGLPPPYPLPQLPAGLGLAGLGLGLAGRLVAGRQACRWVDCCAAYEQQEELVRHIEKSHIDQRKGEDFTCFWAGCVRRYKPFNARYKLLIHMRVHSGEKPNKCMFEGCSKAFSRLENLKIHLRSHTGEKPYLCQHPGCQKAFSNSSDRAKHQRTHLDTKPYACQIPGCSKRYTDPSSLRKHVKAHSAKEQQVRKKLHASPDTEADVLTECLALQQLHASAQLAGGDGKGGHLGQELLPGVYPGSVTPHNGLSSGLLLPAQDVPSRHHPLDNAAGPQHHLSPLPAAEGSRDGLGPGLLSPMLSPLKGLGPPPLPPSSQSQPPGTQPFSALPSKPPYTPFQSPPPPPLPGPQGYQGSFHSIQSCFPYSNCFRSGEPAASGDGLAGEAPGFTQLRPNGYPSLSAPLPASGYEAPCPTALPPQSSEDVASGGPEDCSFFSNGAFDHCLSHIPCIYTDT