Sequence details NCBI ID: XM_004874662.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Yipf1
Gene Name Yip1 domain family, member 1, transcript variant X6
Entrez Gene ID 101706154

Database interlinks

Part of NW_004624934.1 (Scaffold)

For more information consult the page for NW_004624934.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

YIPF1 ENSCPOG00000003015 (Guinea pig)

Gene Details

Yip1 domain family, member 1

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000002732, Guinea pig)

Protein Percentage 95.1%
CDS Percentage 94.44%
Ka/Ks Ratio 0.14468 (Ka = 0.0236, Ks = 0.1634)

YIPF1 ENSG00000058799 (Human)

Gene Details

Yip1 domain family, member 1

External Links

Gene Match (Ensembl Protein ID: ENSP00000072644, Human)

Protein Percentage 94.44%
CDS Percentage 92.16%
Ka/Ks Ratio 0.10582 (Ka = 0.0273, Ks = 0.2576)

Yipf1 ENSMUSG00000057375 (Mouse)

Gene Details

Yip1 domain family, member 1

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000075113, Mouse)

Protein Percentage 85.95%
CDS Percentage 83.22%
Ka/Ks Ratio 0.12255 (Ka = 0.08, Ks = 0.6531)

Yipf1 ENSRNOG00000010512 (Rat)

Gene Details

Yip1 domain family, member 1 (Yipf1), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000014091, Rat)

Protein Percentage 86.93%
CDS Percentage 84.42%
Ka/Ks Ratio 0.12002 (Ka = 0.0707, Ks = 0.5894)

Genome Location

Sequence Coding sequence

Length: 921 bp    Location: 612868..657621   Strand: +
Raw sequence   
>XM_004874662.1
ATGGCAGCTGTGGATAACTTGCGATTTGAAGAATTTGGTGATGCACCCACTTCCCTAGCAACAAACCCAGATGCTACCACGATAAGCATTGAGGATCCTGGCGAAACCCCAAAACATCAACCAGGACCTGCAAGAGGCTCCGGGAGAGAAGAGGATGATGAGTTACTGGGAAATGATGACTCTGATAAAACTGAGTTACTTGCTGGACAGAAGAAAAGCTCTCCCTTCTGGACGTTTGAGTATTATCAAACATTCTTTGATGTGGACACTTACCAGGTCTTTGACAGAATAAAAGGGTCTCTTTTGCCAATACCCGGGAAAAACTTTGTGAGGTTATATATCCGCAGCAATCCAGATCTCTATGGGCCCTTTTGGATATGTGCCACATTGGTCTTTGCCATAGCAATTAGTGGGAATCTTTCCAACTTCTTAATCCATCTGGGAGAGAAGACATACCATTATGTGCCCGAATTCCGAAAAGTGTCCATAGCAGCGACAATCATCTATGCCTATGCCTGGCTGGTTCCCCTTGCTCTCTGGGGTTTCCTCATGTGGAGAAACAGCAAGGTTATGAATATCGTTTCCTATTCGTTTCTGGAGATTGTGTGCGTCTATGGCTATTCCCTCTTCATTTATATCCCCACAGCAATACTATGGATTATTCCCCAGAAAGCAGTTCGTTGGATTCTAGTCATGATTGCCCTGGGCATCTCAGGATCTGTCTTGGCAATGACATTCTGGCCAGCTGTTCGTGAGGATAACCGGCGCATTTCGATGGCCACAATCGTCATGATTGTGTTGCTTCACATGCTTCTTTCTGTAGGCTGCTTGGCCTACTTTTTTGATGCACCAGAAATGGACCATCTCCCAACAGCTACAGCTACTCCTAACCAAACTGTTGCAGCAGCCAAGTTCAGCTAA

Related Sequences

XP_004874719.1 Protein

Yipf1 PREDICTED: protein YIPF1 isoform X6 [Heterocephalus glaber]

Length: 306 aa      View alignments
>XP_004874719.1
MAAVDNLRFEEFGDAPTSLATNPDATTISIEDPGETPKHQPGPARGSGREEDDELLGNDDSDKTELLAGQKKSSPFWTFEYYQTFFDVDTYQVFDRIKGSLLPIPGKNFVRLYIRSNPDLYGPFWICATLVFAIAISGNLSNFLIHLGEKTYHYVPEFRKVSIAATIIYAYAWLVPLALWGFLMWRNSKVMNIVSYSFLEIVCVYGYSLFIYIPTAILWIIPQKAVRWILVMIALGISGSVLAMTFWPAVREDNRRISMATIVMIVLLHMLLSVGCLAYFFDAPEMDHLPTATATPNQTVAAAKFS