Sequence details NCBI ID: XM_004874646.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Ldlrad1
Gene Name low density lipoprotein receptor class A domain containing 1, transcript variant X1
Entrez Gene ID 101702932

Database interlinks

Part of NW_004624934.1 (Scaffold)

For more information consult the page for NW_004624934.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

LDLRAD1 ENSCPOG00000005479 (Guinea pig)

Gene Details

low density lipoprotein receptor class A domain containing 1

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000017371, Guinea pig)

Protein Percentage 76.59%
CDS Percentage 79.67%
Ka/Ks Ratio 0.29287 (Ka = 0.1714, Ks = 0.5853)

LDLRAD1 ENSG00000203985 (Human)

Gene Details

low density lipoprotein receptor class A domain containing 1

External Links

Gene Match (Ensembl Protein ID: ENSP00000360411, Human)

Protein Percentage 77.45%
CDS Percentage 81.05%
Ka/Ks Ratio 0.26927 (Ka = 0.1491, Ks = 0.5537)

Ldlrad1 ENSMUSG00000070877 (Mouse)

Gene Details

low density lipoprotein receptor class A domain containing 1

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000092521, Mouse)

Protein Percentage 69.27%
CDS Percentage 75.12%
Ka/Ks Ratio 0.2497 (Ka = 0.2048, Ks = 0.8204)

Ldlrad1 ENSRNOG00000037795 (Rat)

Gene Details

Protein Ldlrad1

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000054184, Rat)

Protein Percentage 67.8%
CDS Percentage 74.31%
Ka/Ks Ratio 0.29823 (Ka = 0.2265, Ks = 0.7594)

Genome Location

Sequence Coding sequence

Length: 639 bp    Location: 493090..501229   Strand: +
Raw sequence   
>XM_004874646.1
ATGAACAAGGTCGTCCCCCAGGGAAATGGCAATGGCCGTGCTGCTGCTGGAACCAAAGCCCACCCCGAAGGAGAAGGGAGCCTCAGCCCCAGCTGCTCCCGACGTGGGGCCTGCCTCTCCGCTCTTCTGCTGCTCCTGCTGGCAATGCTTGCTGCCCTTGTCGCCCTGGTTGTCAGCCTTGGACTCCCATCACGCCCTCCAGGGCCTCCTCCTATCCACTCAGGGACCCAGGCCTGTGTGACACTGACCAACAGGACAGGCTTCCTGTGCCATGACCAGAGGATCTGCGTGCCTGCCAGCACGGTGTGTGATGGCTTTCACACTTGTCCCCATGGCGAGGATGAGGACGAGAGCCTGTGCCGAGATGTGCCCCAGACCCTCCCCAGCTTCCTTGTGGCCCGTTGTGGAGACCCGGCCGCCTGGATCTACTCCGATCAAAAGTGCGACGGGACCAACAACTGTGGGGACTGCTCGGATGAACTGAGCCCAGTGACCACGTGCCCACCCTGCGGCCCTGGGTGGTGGCGCTGCCTTCCCACCGTCTTCCAGTACTGCGGCTGTGTCCCAAGGGCCCTGTGCCAGGATGGCACACAGCACTGCTCCGACTGGTCTGATGAGTACACCTGTCTGCGACCCTGA

Related Sequences

XP_004874703.1 Protein

Ldlrad1 PREDICTED: low-density lipoprotein receptor class A domain-containing protein 1 isoform X1 [Heterocephalus glaber]

Length: 212 aa      View alignments
>XP_004874703.1
MNKVVPQGNGNGRAAAGTKAHPEGEGSLSPSCSRRGACLSALLLLLLAMLAALVALVVSLGLPSRPPGPPPIHSGTQACVTLTNRTGFLCHDQRICVPASTVCDGFHTCPHGEDEDESLCRDVPQTLPSFLVARCGDPAAWIYSDQKCDGTNNCGDCSDELSPVTTCPPCGPGWWRCLPTVFQYCGCVPRALCQDGTQHCSDWSDEYTCLRP