Details from NCBI annotation

Gene Symbol Lamp2
Gene Name lysosomal-associated membrane protein 2, transcript variant X2
Entrez Gene ID 101710608

Database interlinks

Part of NW_004624931.1 (Scaffold)

For more information consult the page for NW_004624931.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

LAMP2 ENSCPOG00000012996 (Guinea pig)

Gene Details

lysosomal-associated membrane protein 2

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000011701, Guinea pig)

Protein Percentage 69.65%
CDS Percentage 77.69%
Ka/Ks Ratio 0.41608 (Ka = 0.2158, Ks = 0.5188)

LAMP2 ENSG00000005893 (Human)

Gene Details

lysosomal-associated membrane protein 2

External Links

Gene Match (Ensembl Protein ID: ENSP00000408411, Human)

Protein Percentage 76.1%
CDS Percentage 84.23%
Ka/Ks Ratio 0.49271 (Ka = 0.1483, Ks = 0.301)

Lamp2 ENSMUSG00000016534 (Mouse)

Gene Details

lysosomal-associated membrane protein 2

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000052283, Mouse)

Protein Percentage 63.39%
CDS Percentage 74.2%
Ka/Ks Ratio 0.46639 (Ka = 0.2701, Ks = 0.5792)

Lamp2 ENSRNOG00000000164 (Rat)

Gene Details

lysosomal-associated membrane protein 2 (Lamp2), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000000177, Rat)

Protein Percentage 70.27%
CDS Percentage 79.28%
Ka/Ks Ratio 0.57963 (Ka = 0.216, Ks = 0.3727)

Genome Location

Sequence Coding sequence

Length: 1236 bp    Location: 343294..297864   Strand: -
>XM_004874601.1
ATGCTGTGCTTCCGCTTCTGCCCTGTTCCGCGCTTGGAGCTCGTTCTCCTCTGCCTAGTCCTGGGGGCTGCCCGGTCTTGTGCGTTGGAACTTAATTTGACAAATTCAGAAAAAGCCACTTGCCTTTATGCAAAATGGCAGATGAATTTCACAATACACTATGAAACTACAAACAAAACTTATAAAACTGCAACCATTTCAGACCATGACAATGTGACATATAATGGAAGCATTTGTGATGATGACCACAATGTTTCCAAAATAGCTGTGCAATTTGGATCTGGTTTCTCCTGGATTGTGAATTTTACCAAGCAGGAGCCTAATTACTTTATTGACAGCATCTCATTTTCCTACAACACTGAGGATAACATAACATTTCCTGGTGCTAAAGATAAAGGAATTGTTACTGTTCATTATTCTGAGAAAGTCAGCATTCCATTGAATGACATCTTTAGATGCAGTAGTTTATTAACTTATGAAGAGAACCATGTTGTCCAGCACTATTGGGATGTTCTTGTTCAAGCTTTTGTCCAGAATGGCACAGTGAGCAGAAAAGAATTTCTGTGTACGAAAGACAAAGGTTCCACAACAGTGGCACCCATCATTCACACCACTGTGCCCTCTCCTACTACAACACCCACTCCAAAGGAAAAACCACAAGTTGGAAACTATTCAGTGAGCAACGGCAACACCACGTGCCTGCTGGCTACCATGGGGCTGCAGCTGAACATCACTCAGGATAAGATTGCTTCAGTTATTAACATCAACCCCAATTCAACTGGCTTCACTGGCAGCTGCCAACCCCAGACTGCTCAGCTTAGGCTGAACAGCAGCATCATTAAGTATCTTGACTTTGTCTTTGCTGTGAAAAATGAAAACCGATTCTATCTGAAGGAAGTGAATGCCAGCATATATTTGGCTAATGGCTCTGTTTTCAGCATTGCAAATAACAACCTCAGCTACTGGGATGCCCCCCTGGGAAGTTCTTATATGTGCAACAAAGAGCAGACTCTTTCAGTGTCTGGAACATTTCAGATAAATACCTTCAATCTAAAGGTTCAGCCTTTCAATGTGACAGAAGGAAAGTATTCTACAGCTCAAGACTGCAGTGCAGATGACGACAACTTCCTTGTGCCCATAGCGGTGGGAGCAGCCTTGGCAGGAGTACTTATTCTAGTATTGCTGGCTTATTTTATTGGTCTCAAGCGCCATCATGCTGGATATGAGCAATTTTAA

Related Sequences

XP_004874658.1 Protein

Lamp2 PREDICTED: lysosome-associated membrane glycoprotein 2 isoform X2 [Heterocephalus glaber]

Length: 411 aa      View alignments
>XP_004874658.1
MLCFRFCPVPRLELVLLCLVLGAARSCALELNLTNSEKATCLYAKWQMNFTIHYETTNKTYKTATISDHDNVTYNGSICDDDHNVSKIAVQFGSGFSWIVNFTKQEPNYFIDSISFSYNTEDNITFPGAKDKGIVTVHYSEKVSIPLNDIFRCSSLLTYEENHVVQHYWDVLVQAFVQNGTVSRKEFLCTKDKGSTTVAPIIHTTVPSPTTTPTPKEKPQVGNYSVSNGNTTCLLATMGLQLNITQDKIASVININPNSTGFTGSCQPQTAQLRLNSSIIKYLDFVFAVKNENRFYLKEVNASIYLANGSVFSIANNNLSYWDAPLGSSYMCNKEQTLSVSGTFQINTFNLKVQPFNVTEGKYSTAQDCSADDDNFLVPIAVGAALAGVLILVLLAYFIGLKRHHAGYEQF