Details from NCBI annotation

Gene Symbol Fndc1
Gene Name fibronectin type III domain containing 1, transcript variant X1
Entrez Gene ID 101718476

Database interlinks

Part of NW_004624929.1 (Scaffold)

For more information consult the page for NW_004624929.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

FNDC1 ENSCPOG00000006443 (Guinea pig)

Gene Details

fibronectin type III domain containing 1

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000005806, Guinea pig)

Protein Percentage 86.02%
CDS Percentage 89.3%
Ka/Ks Ratio 0.38088 (Ka = 0.0812, Ks = 0.2132)

FNDC1 ENSG00000164694 (Human)

Gene Details

fibronectin type III domain containing 1

External Links

Gene Match (Ensembl Protein ID: ENSP00000297267, Human)

Protein Percentage 77.56%
CDS Percentage 81.57%
Ka/Ks Ratio 0.30407 (Ka = 0.1409, Ks = 0.4633)

Fndc1 ENSMUSG00000071984 (Mouse)

Gene Details

fibronectin type III domain containing 1

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000095036, Mouse)

Protein Percentage 70.98%
CDS Percentage 75.36%
Ka/Ks Ratio 0.29846 (Ka = 0.2033, Ks = 0.6812)

Fndc1 ENSRNOG00000030210 (Rat)

Gene Details

fibronectin type III domain containing 1 (Fndc1), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000029878, Rat)

Protein Percentage 71.31%
CDS Percentage 75.33%
Ka/Ks Ratio 0.27678 (Ka = 0.1977, Ks = 0.7143)

Genome Location

Sequence Coding sequence

Length: 5298 bp    Location: 460226..395802   Strand: -
>XM_004874542.1
ATGAGCCGTCCAGTTTACAGAGCTGAAAGTCCAACTGGAGGTGAATGGATCAAGATTGATGGTTTTTCCATTAAGGGTCCAGAACCATTTAATGAAACCGTCACAGAAAAGGAAGTGCCCAACAAGCCCTTGCGTGTGCGTGTCCAGTCCTCAGACGACAGGCTGTCCGTTGCGTGGAAGGCACCACGCCTGTCAGGAGCCAAGAGTCCACGCAGATCTCGGGGTTTTCTTCTGGGCTATGGAGAGAGTGGTCGGAAGATGAATTATGTTCCACTAACAAGAGATCAGCGGACACATGAAATTAAAAAGCTAGAAGAGGACGAACTGGATGTACCTAAAGACATCAGTGTCCGAGTTATGTCGTCCCAATCTGTGCTTGTGGCCTGGGTGGATCCTGTTTTGGAAAATCAGAAGAAAGTTGTTGCATCAAGACAGTACACTGTGCGCTATCGAGAGAAGGGGGAATCAGCCAGGTGGGATTACAAGCAGATTGGTAATAGGCGTATGATGATTGAGAACTTGATGCCAGATACCGTGTATGAGTTTGCAGTCCGCACTTCACAGGGTGAAAGAGATGGCAAATGGAGTACATCAGTCTTCCAAAGAACACCAGAGTCTGCTCCTACCACAGCTCCTGAAAACTTGAATGTCTGGCCAGTCAATGGCAAATCTACAGTTGTCACTGTATCTTGGGATCCATTGCCAGAGACTGAGGGGAAAGTGAAAGAATACATTCTTTCATACGCCCCGGCTCTCAAACCATTCGGAGCAAAGTCCCTCACCTACTCTGGACGCACTACTTCTGCCCTCGTGGATGGTCTGCAGCCTGGGGAACGCTATCTGTTCAAAATCCGGGCCGCAAACAGGAGAGGCCCGGGGCCGCACTCCAAAGCCTTCATTGTCGCTATGCCAACCAGTGCCAGTGAGCCTAAAGTTCAGCAGAATGCAGATCATCGGAAACCAGAGCCTTCTTCCCCTTCTTCCAAAGCTCCAGCTTCCTCAGAACACACTCATCTGCCTGGTTCTCTCCCAGGCAGAAATGTCAAGGACCCTCTCCTTGACTTGAAAAACAAAATACTGGCCAATGGTGGGGTGCTCAGAAAACCCCAGCTTCATCCTAAGAAGGCTGAAGAGTTGGATGCTCAGTCCACAGAAGTCACTGATGAGGAGGAGCTGGATTCCTTGGAGGATCCACACACATCAAACTCCCACACGCAAGACCAGAGGCGAACCCTGAGGCTACCAAGCAGATCTGGCCACTGGGTCCCAGCCTCTGGCAGGACTTCACCGAGGGCCCGAACGCCTGCATTACCCCCAAAAGAAGGCATGGATAAGCATGGCCCCTCACTGGTTGCCCACCCTCGCCCAGGGGCTGCCTCCCCTGAGGAGGCCTCCCCTGCCCACCATGAAGCCACCCAGAGCCCCTCGCCTCACTCTGATCGGGGGCCCTCTGCCAGCCCCATTGACAATGACAGTGACTCTATGGATCGAGATGAGGAGGAGCGAGCTGCAAGCTCCCCCCATTCCAAGGCCACCACCTCCCAGCAGCTGCCTCCTAAGATCCCAGCCCAGTCCCAGCCAGCCCTGTCCCCCAGCAATGAGGCGGCTTCCAGTGACATGAGGCCCACGCACCATGGTGCAAAGCCAGCCTTGCCTGCACGCAGGACACCCCATTCTGGGGTTGTGGAGGAAGATTCCAGTGCTCCTGTCCCACCCTCAAGACTTTCTCCACCCCTCAGAGGGCCATCTCGGCTGCTGCCCATCCAACCACATCCTGGCCCTCCACTCTCTAGCGGCTGGAAGGACGGTCACTCCCACACACCCTCACAGTCTACCCTGTCTGCCGAGGACTCTTCCCATCTCTCTTCCAGGACAGAGGTCTCTGAGAGAGGGCATGCTTCTGACGGCAGGGGCCCCAGTGACAGGAATGCAGAGGACCCTGCGAGGCAGGCTGAGGCCACTGTCCCCTCCCCAAGGGCCCGGCCTGCCTCTGGACACTTCAGTTTGCTCAGGAACAGGCCCTTCGCTGCCAATGGCAGGTTTCCAAACAGGTTCCTCAATGGCCGAGGACCACGGCTGCAGCCCTCCAGCTCCCCTCAGTCCACCATGGCCTCCCGAGCCCTCCCCAAGGTCCATTCCCAGTCAGGTTCCCATCCTAGGCTTGGGTCAGGTATCCATGGAGACAGGGAGGACGAGAAGCCACTTCCTGCCACTGTGATCAATGACCACAGGACTTCCTCACCCAGGCAGCCCCCCTCTGGAGGCTGGGACTCTTCAAGAAGAGGCCCCCAGAGAGGGGCCAGCTTGTTCAGGAAAGAGGCTGTCCCAGAGAACCCCAAACCTGTGGGGACAGATGTACATTCTTTGGACAAATCCCCCTCTCCGACCTTCAGGGCACAGGATGTTGAACAAAGCACAGACTTGGAGGTGGAGGAGCATTCTCCCAAAACTCAGCTAGTGTCCGCGGGGAGCCAGCTGTCCCCTGCCCGTCCTCCAGCAAGGACTCAGCCCTACCCCGGGGCCAGTGTGCCTAGAAGGATGGCCCCTGGCCGGGTCCCGCAAAATCAGCCCCTTGCACCGGTTTCCACTTCCCAGCACCAGCATCCGGGTGGCCTCCAGAGCAAGGATGCTGATCGCTCCCTTTCCCAGCCTAAACTCGCGCTGGCTCCGGCCGGACGTCCCCGCCCCACGACGCTGGGCGGTGCTCACTCCTCAGATCCGTTCGTGGGGAGCTCGGGAGGGGTGCTCCGCCCGGCTCCCCAGGGCCAGGCCCAGAGTTCCCAGAGCAGCTATGAGGACAACAGCACAGAAGTAGAGGCCCAAGATGTCCGCGACCCCATGCACACCACCCACCCCAAGGATGCCACCCCATCCCTGTCCAAGTACCATCAAGTGGTGTCTCCGGCAGGGACCAGCCAGGACAGACCCCAGCGTGGCCATGCAGGCGCATCCCAGAGGCCCGGCAGCCCCCAGCCCCGCGTCCGGGTCCCAGGCAGGGCCGGGGCGCAGGTCACACTTGGAAAAGAGCCTCCTTCCAAGCGGCCACTGCCCTCCAAATCTCTGCAGTCAGTCTCCACCGAGGAGGAGGAAGAGGAGGGCCCGGAAATTCTAAAAGGAGAAAAGGAGGACCCTCTGTCTTCCTCTGTTCCAAAGTGGCTTTCTTCCTCCACTCCCAGGGGCAGCAAATACTCAGATGGGAGCCTCACCAAGGACAGGCCTACCATTGTACTGGCTCCCAGAGCGGGGAGCTCCACGCCGGAAGAGGGCGCCACCCCGGGAAAGCGACTTCTGGGCAGCCTCCCAAGAGCCTCACACCTCCCTACCAGACACCCTCCTCGAAGTCCTGCCACCCTGAGTCCCAGCGTGAGCACCCCTTCCTGGCCACAATATGCCACTCGCGCCCCTCCAAGTGACTATTCCACCACACCGATGCTGTCCTTGAGACAGCGGATGCAGCGCAGATTTCGCATTCCTGGCTCACGCCAGCCTGCGAGGCCCTCTTACGCACAAGGTTATAACGGCAGATCCAATGTAGAAGGGAAAGTACTTCCTGGTAGTAATGGGAAACCGAGTGGACAAAGGATTATCAATGGCCCTCAAGGAACAAAGTGGGTTGTGGATTTTGATCGTGAGTTAGTGTTGAATGCAGAAGGGAGATACCTCCAAGATTCACATGGAAATCCTCTCCGAGTGAAACTGGGAGGAGATGGTCGCACCATTGTGGATCTGGGAGGAACACCTGTGATCAGTCCTGATGGTCTCCCCCTCTTCGGGCAGGGGCGACATGGCAAACCCCTGGCCAGTGCCCCAGATAAGCCCATCTTGAGCCTTGGAGGAAAGCCTCTGGTGGGCCTGGAGGTCATCAAAACAACCACCCTTCCCCCCACCACAACCATGCGGCCTACCACAACCACAACCACTGTGCCTACCACTACCTCTCCTCGACCCACAAGGGCCACCACCCGTCGCACAACCACCACCCGTCGCACGACCACCACCCGCCGCACAACCACTGCCCGCCACACGACCACCACTCAACGCACAACCACAACCACTCGCCCAACGACTACAGTCCGAACTACTATGCAGACAACTACCACCACCACCCCTGAACCCACCACCCCCATCCCCACCTGTCCCCCTGGGACCCTGGGACATCTTGATGATGATGGCAACCTGATAATGGGCTCTAATGGCATCCCAGAGTGCTACCCTGAAGAAGATGAATTCTCAGGCCTGGAGACAGACACAGCCATACCCACAGAGGAGGCCTATGTCATATATGATGAAGACTATGAATTTGAGACCACAAGGCCACCAGCCACCACCAAGCCCACCACCAAGCCCACCACCACTGCCACCACTCCAAAGGTCATTCCAGAGGAAGGCGTCATCAGTTCTTTTCCGGAAGAAGAATTTGATCTGGTTGGGAAGAAACGATTTGTTGCTCCTTATGTAACATACCTGAATAAAGATCCATCAGCCCCATGCTCTCTGACTGATGCTCTGGACCATTTCCAAGTGGAGAGCCTGGATGAAATCATTCCAAATGACTTGACAAAGAATGACCTGCCTCCTCAGCATGTCCCACGGAACATCACTGTGGTTGCTATGGAAGGCTGCCACTCGTTTGTCATTGTAGACTGGGACAAAGCCACCCCTGGAGATGTGGTAACAGGGTACCTGGTCTACAGTGCATCCTATGAAGACTTCATCAGGAACAAGTGGTCCACTCAAGCTTCATCAGTAACCCATTTGCCCATTGAGAACCTGAAGCCAAACACACGGTATTACTTTAAAGTTCAAGCCAAAAATCCTCATGGCTATGGACCTATCAGCTCTTCAGTTTCATTTGTTACAGAATCAGACAATCCCCTCCTTGTTGTGAGGCCTCCAGGTGGTGAGCCCATCTGGATCCCATTTGCTTTCAAACATGACCCAGGATACACAGACTGCCATGGCCGGCAGTATGTGAAGCGGACGTGGTATAAAAAGTTTGTGGGAGTCGTTCTTTGTAATTCTCTGAGGTACAAAATCTACCTCAGTGACAACCTGAAAGATACATTCTACAGCATTGGAGACAGCTGGGGGAGAGGTGAAGATCATTGCCAATTTGTGGATTCACATCTCGATGGAAGAACAGGGCCTCAGTCTTATATAGAAGGCCTCCCTAAGATTCAAGGTTACCACCGCCAGTATCGCCAGGAGCCCGTCAGCTTTGGCCACATTGGTTTTGGCACCCCCTACTACTATGTGGGCTGGTATGAGTGTGGGGTCTCCATCCCGGGAAAGTGGTGA

Related Sequences

XP_004874599.1 Protein

Fndc1 PREDICTED: fibronectin type III domain-containing protein 1 isoform X1 [Heterocephalus glaber]

Length: 1765 aa      View alignments
>XP_004874599.1
MSRPVYRAESPTGGEWIKIDGFSIKGPEPFNETVTEKEVPNKPLRVRVQSSDDRLSVAWKAPRLSGAKSPRRSRGFLLGYGESGRKMNYVPLTRDQRTHEIKKLEEDELDVPKDISVRVMSSQSVLVAWVDPVLENQKKVVASRQYTVRYREKGESARWDYKQIGNRRMMIENLMPDTVYEFAVRTSQGERDGKWSTSVFQRTPESAPTTAPENLNVWPVNGKSTVVTVSWDPLPETEGKVKEYILSYAPALKPFGAKSLTYSGRTTSALVDGLQPGERYLFKIRAANRRGPGPHSKAFIVAMPTSASEPKVQQNADHRKPEPSSPSSKAPASSEHTHLPGSLPGRNVKDPLLDLKNKILANGGVLRKPQLHPKKAEELDAQSTEVTDEEELDSLEDPHTSNSHTQDQRRTLRLPSRSGHWVPASGRTSPRARTPALPPKEGMDKHGPSLVAHPRPGAASPEEASPAHHEATQSPSPHSDRGPSASPIDNDSDSMDRDEEERAASSPHSKATTSQQLPPKIPAQSQPALSPSNEAASSDMRPTHHGAKPALPARRTPHSGVVEEDSSAPVPPSRLSPPLRGPSRLLPIQPHPGPPLSSGWKDGHSHTPSQSTLSAEDSSHLSSRTEVSERGHASDGRGPSDRNAEDPARQAEATVPSPRARPASGHFSLLRNRPFAANGRFPNRFLNGRGPRLQPSSSPQSTMASRALPKVHSQSGSHPRLGSGIHGDREDEKPLPATVINDHRTSSPRQPPSGGWDSSRRGPQRGASLFRKEAVPENPKPVGTDVHSLDKSPSPTFRAQDVEQSTDLEVEEHSPKTQLVSAGSQLSPARPPARTQPYPGASVPRRMAPGRVPQNQPLAPVSTSQHQHPGGLQSKDADRSLSQPKLALAPAGRPRPTTLGGAHSSDPFVGSSGGVLRPAPQGQAQSSQSSYEDNSTEVEAQDVRDPMHTTHPKDATPSLSKYHQVVSPAGTSQDRPQRGHAGASQRPGSPQPRVRVPGRAGAQVTLGKEPPSKRPLPSKSLQSVSTEEEEEEGPEILKGEKEDPLSSSVPKWLSSSTPRGSKYSDGSLTKDRPTIVLAPRAGSSTPEEGATPGKRLLGSLPRASHLPTRHPPRSPATLSPSVSTPSWPQYATRAPPSDYSTTPMLSLRQRMQRRFRIPGSRQPARPSYAQGYNGRSNVEGKVLPGSNGKPSGQRIINGPQGTKWVVDFDRELVLNAEGRYLQDSHGNPLRVKLGGDGRTIVDLGGTPVISPDGLPLFGQGRHGKPLASAPDKPILSLGGKPLVGLEVIKTTTLPPTTTMRPTTTTTTVPTTTSPRPTRATTRRTTTTRRTTTTRRTTTARHTTTTQRTTTTTRPTTTVRTTMQTTTTTTPEPTTPIPTCPPGTLGHLDDDGNLIMGSNGIPECYPEEDEFSGLETDTAIPTEEAYVIYDEDYEFETTRPPATTKPTTKPTTTATTPKVIPEEGVISSFPEEEFDLVGKKRFVAPYVTYLNKDPSAPCSLTDALDHFQVESLDEIIPNDLTKNDLPPQHVPRNITVVAMEGCHSFVIVDWDKATPGDVVTGYLVYSASYEDFIRNKWSTQASSVTHLPIENLKPNTRYYFKVQAKNPHGYGPISSSVSFVTESDNPLLVVRPPGGEPIWIPFAFKHDPGYTDCHGRQYVKRTWYKKFVGVVLCNSLRYKIYLSDNLKDTFYSIGDSWGRGEDHCQFVDSHLDGRTGPQSYIEGLPKIQGYHRQYRQEPVSFGHIGFGTPYYYVGWYECGVSIPGKW