Sequence details NCBI ID: XM_004874442.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Lrrc10b
Gene Name leucine rich repeat containing 10B
Entrez Gene ID 101710968

Database interlinks

Part of NW_004624926.1 (Scaffold)

For more information consult the page for NW_004624926.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

LRRC10B ENSCPOG00000014403 (Guinea pig)

Gene Details

leucine rich repeat containing 10B

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000017309, Guinea pig)

Protein Percentage 92.13%
CDS Percentage 91.47%
Ka/Ks Ratio 0.05752 (Ka = 0.0396, Ks = 0.6882)

LRRC10B ENSG00000204950 (Human)

Gene Details

leucine rich repeat containing 10B

External Links

Gene Match (Ensembl Protein ID: ENSP00000367315, Human)

Protein Percentage 93.97%
CDS Percentage 91.84%
Ka/Ks Ratio 0.02233 (Ka = 0.0253, Ks = 1.1354)

Lrrc10b ENSMUSG00000090291 (Mouse)

Gene Details

leucine rich repeat containing 10B

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000132865, Mouse)

Protein Percentage 92.55%
CDS Percentage 87.94%
Ka/Ks Ratio 0.02286 (Ka = 0.0352, Ks = 1.5405)

Lrrc10b ENSRNOG00000030180 (Rat)

Gene Details

leucine rich repeat containing 10B (Lrrc10b), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000048468, Rat)

Protein Percentage 92.91%
CDS Percentage 87.35%
Ka/Ks Ratio 0.01679 (Ka = 0.0339, Ks = 2.0199)

Genome Location

Sequence Coding sequence

Length: 849 bp    Location: 769151..768303   Strand: -
Raw sequence   
>XM_004874442.1
ATGGGCGCCGCGGAGTCCACGCTGGACGAGCTGCCGTCGGACGCCGAGGAGCAGCTGCGCAGCGGCGAGCAGCAGCTGGAGCTGAGCGGGCGGCGGCTGCGGAGGCTGCCAGGCGCCGTGTGCGCGCTCGGCCGCCTTCAGAAGCTGTACGTGAGCGGCGCGGGGCTGCGCGAGCTGCCCGAGGAGGTCGAGGAGCTGCGCGAGCTGCGCATCCTGGCGCTGGACTCCAACAAGCTGGAGCTCCTGCCCGACGGGCTGTGCCGCCTGCCGCGCCTCGCGCGCCTCTACCTGGGCGGCAACCGGCTGCGCGCGCTGCCCGCCGACTTCGCGCAGCTGCAGAGCCTGCGCTGCCTCTGGATCGAGGGCAACTTCCTGCGGCGCTTCCCGCGGCCGCTGCTGCGCCTCGCGGCGCTGCAGTCGCTGCAGATGGGCGACAACCGGCTGCGCGCGCTGCCGGCCGAGCTCCCGCGCATGACCGGCCTGCGCGGGCTCTGGCTCTACGGCAACCGCTTCGAGGAGTTCCCGCCCGCGCTGCTGCGCATGGGCCGCCTGCACATCCTCGACCTGGACCGCAACCGCCTGGGCGGATTCCCCGACCTGCACCCGCTCCGCGCGCTGCGCGTCTTTTCCTACGACCACAACCCGGTCACCGGGCCCCCGCGCGTGGCCGACACGGTCTTCCTCGTGGGCGAGGGCGCCGTCGAGCGCATGGCTGAGCGCGACGAGCCCACGCCGCGGCCACCGCCCCGCCGCCTCGCGCGCGCCTTCGAGGACGACGAGGAGGAGGAGCTGCTGATCGGCGGCGCGGGCGCCCGGGCCCTGGAGGCCCCGCCAGGCCTGGGCACCTGA

Related Sequences

XP_004874499.1 Protein

Lrrc10b PREDICTED: leucine-rich repeat-containing protein 10B [Heterocephalus glaber]

Length: 282 aa      View alignments
>XP_004874499.1
MGAAESTLDELPSDAEEQLRSGEQQLELSGRRLRRLPGAVCALGRLQKLYVSGAGLRELPEEVEELRELRILALDSNKLELLPDGLCRLPRLARLYLGGNRLRALPADFAQLQSLRCLWIEGNFLRRFPRPLLRLAALQSLQMGDNRLRALPAELPRMTGLRGLWLYGNRFEEFPPALLRMGRLHILDLDRNRLGGFPDLHPLRALRVFSYDHNPVTGPPRVADTVFLVGEGAVERMAERDEPTPRPPPRRLARAFEDDEEEELLIGGAGARALEAPPGLGT