Details from NCBI annotation

Gene Symbol Taf6l
Gene Name TAF6-like RNA polymerase II, p300/CBP-associated factor (PCAF)-associated factor, 65kDa, transcript variant X4
Entrez Gene ID 101698270

Database interlinks

Part of NW_004624926.1 (Scaffold)

For more information consult the page for NW_004624926.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

TAF6L ENSCPOG00000002702 (Guinea pig)

Gene Details

TAF6-like RNA polymerase II, p300/CBP-associated factor (PCAF)-associated factor, 65kDa

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000002453, Guinea pig)

Protein Percentage 94.82%
CDS Percentage 88.41%
Ka/Ks Ratio 0.03914 (Ka = 0.0258, Ks = 0.6595)

TAF6L ENSG00000162227 (Human)

Gene Details

TAF6-like RNA polymerase II, p300/CBP-associated factor (PCAF)-associated factor, 65kDa

External Links

Gene Match (Ensembl Protein ID: ENSP00000294168, Human)

Protein Percentage 90.18%
CDS Percentage 84.53%
Ka/Ks Ratio 0.04477 (Ka = 0.0451, Ks = 1.008)

Taf6l ENSMUSG00000003680 (Mouse)

Gene Details

TAF6-like RNA polymerase II, p300/CBP-associated factor (PCAF)-associated factor

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000135193, Mouse)

Protein Percentage 90.83%
CDS Percentage 81.78%
Ka/Ks Ratio 0.03517 (Ka = 0.046, Ks = 1.3069)

Taf6l ENSRNOG00000019419 (Rat)

Gene Details

TAF6-like RNA polymerase II, p300/CBP-associated factor (PCAF)-associated factor (Taf6l), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000026284, Rat)

Protein Percentage 90.0%
CDS Percentage 81.33%
Ka/Ks Ratio 0.03703 (Ka = 0.0506, Ks = 1.3672)

Genome Location

Sequence Coding sequence

Length: 1806 bp    Location: 1237148..1245178   Strand: +
>XM_004874405.1
ATGTCAGAGCGCGAAGAGCGGCGGTTTGTGGAGATCCCACGGGAGTCAGTGAGGCTCATGGCTGAGAGCACAGGGTTGGAGCTGAGCGATGAGGTGGCAGCGCTGCTGGCCGAGGATGTGTGCTACCGGCTCCGAGAGGCCACTCAGAACAGCTCCCAGTTCATGAAGCACACCAAGCGGCGGAAGCTGACCGTGGAGGACTTCAACAGGGCCCTGCGCTGGAGCAGTGTGGAGGCCGTGTGTGGCTATGGCTCCCAGGAGGCCCTGCCCCTGCGCCCCGCCAGGGAGGGTGAGCTCTACTTCCCTGAGGACAGAGAGGTGAACCTGGTGGAGCTGGCCCTGGCCACCAACCTCCCCAAGGGCTGCGCGGAGACGGCTGTCAGAGTCCACGTCTCCTACCTGGATGGCAAAGGCAACCTGGCGCCCCAGGGCTCAGTGCCCAGCGCAGTGTCTTCATTGACCGATGACCTGCTCAAGTACTATCAGCAAGTGACTCGGGCTGTGCTTGGGGATGACCCACAGCTGATGAAGGTTGCTCTCCAGGACCTGCAGACGAACTCCAAGATTGCAGCTCTGTTGCCTTACTTTGTCTACGTGGTCAGTGGGGTGAAATCTGTAAGCCATGACCTGGAGCAGCTGCACCGGCTGCTGCAGGTGGCCCGGAGCCTCGTTCGGAACCCACACCTCTGCCTGGGGCCCTACGTCCGCTCCCTGGTAGGCAGTGTCCTCTACTGCGTCCTGGAGCCCCTGGCTGCCTCCATCAACCCCCTCAATGACCACTGGACCCTGCGGGATGGGGCTGCTCTCCTCCTCAGCCACATCTTCTGGACTCATGGGGACCTCGTCAGTGGCCTCTATCAGCAGATCCTGCTGTCCCTGCAGAAGGTGTTGGCAGACCCCGTGCGGCCTCTTTGCTCTCACTATGGTGCTGTGGTGGGGCTGCATGCACTTGGGTGGAAGGCTGTGGAGCGCGTCCTGTACCCGCATCTGTCCACCTACTGGACCAACCTGCAGGCCGTGCTGGACGACTACTCGGTATCCAATGCGCAGGTCAAGGCTGATGGGCACAAGGTGTACGGCGCCATCCTGGTGGCCGTCGAGCGCCTGCTGAAGATGAAGGCGCGGGGCGGCGGCCGGCACCCCGAGGACCCGCCGTGGGGCGGCCTCCTGCTGCCCGAGCCCCCGGCCGAACCCGGCTTCGCGCCCGCGCCGCCGCCGCCGGCTGCTGGCCCCGCGCCTGCCGCGCCGCCCGCCACGCTGGCCGGCATTTACCGCGAGCTGTACGCCTTCTTCGGCGACAGCCTGGCCACACGCTTCGGCACCGGCCAGCCCGCACCCGCCGCCCCGCGCCCCCCCGGAGATAAGAAGGAGCCGGCGGCCGCCGCGGACGCGGTGCGCAAGATGCCGCAGCTCACAGCCAGCGCTAAGCTGAGCCCGCCGGGCGACGAGAGCCCCCGGGGCGGCCCCCCGGCTGCCCCGGCAACTTCCGCCGCCGAAAGCCGGCCGCTGCCGCGTGTGCACCGGGCCCGGGGAACGCCCCGGCCGCAGGGCTCCGGTGCCGGCGCCCGGGACATCTTTCAGAAGAGCCGCTTCGCGCCGCGCGGGGCCCCGCACTTCCGCTTCATCATCGCGGGGCGCCAGGCTGGGCGGCGTTGCCGCGGCCGCCTCTTCCAAACCACCTTTCCCGCCCCGCACGGGCCAAGCCCGGCCTCGCGTTACGTCCAGAAGCTGCCCATGATCGGCCGTACCAGCCGCCCGGCGCACCGCTGGGCCCTCTCGGACTACTCTCTGTACCTACCGCTCTAA

Related Sequences

XP_004874462.1 Protein

Taf6l PREDICTED: TAF6-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 6L isoform X4 [Heterocephalus glaber]

Length: 601 aa      View alignments
>XP_004874462.1
MSEREERRFVEIPRESVRLMAESTGLELSDEVAALLAEDVCYRLREATQNSSQFMKHTKRRKLTVEDFNRALRWSSVEAVCGYGSQEALPLRPAREGELYFPEDREVNLVELALATNLPKGCAETAVRVHVSYLDGKGNLAPQGSVPSAVSSLTDDLLKYYQQVTRAVLGDDPQLMKVALQDLQTNSKIAALLPYFVYVVSGVKSVSHDLEQLHRLLQVARSLVRNPHLCLGPYVRSLVGSVLYCVLEPLAASINPLNDHWTLRDGAALLLSHIFWTHGDLVSGLYQQILLSLQKVLADPVRPLCSHYGAVVGLHALGWKAVERVLYPHLSTYWTNLQAVLDDYSVSNAQVKADGHKVYGAILVAVERLLKMKARGGGRHPEDPPWGGLLLPEPPAEPGFAPAPPPPAAGPAPAAPPATLAGIYRELYAFFGDSLATRFGTGQPAPAAPRPPGDKKEPAAAADAVRKMPQLTASAKLSPPGDESPRGGPPAAPATSAAESRPLPRVHRARGTPRPQGSGAGARDIFQKSRFAPRGAPHFRFIIAGRQAGRRCRGRLFQTTFPAPHGPSPASRYVQKLPMIGRTSRPAHRWALSDYSLYLPL