Sequence details NCBI ID: XM_004874368.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Tut1
Gene Name terminal uridylyl transferase 1, U6 snRNA-specific, transcript variant X4
Entrez Gene ID 101716868

Database interlinks

Part of NW_004624926.1 (Scaffold)

For more information consult the page for NW_004624926.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

TUT1 ENSCPOG00000014281 (Guinea pig)

Gene Details

terminal uridylyl transferase 1, U6 snRNA-specific

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000012867, Guinea pig)

Protein Percentage 84.34%
CDS Percentage 85.41%
Ka/Ks Ratio 0.20447 (Ka = 0.0918, Ks = 0.4489)

MIR3654 ENSG00000255508 (Human)

Gene Details

microRNA 3654

External Links

Gene Match (Ensembl Protein ID: ENSP00000456163, Human)

Protein Percentage 83.72%
CDS Percentage 81.42%
Ka/Ks Ratio 0.14418 (Ka = 0.1021, Ks = 0.7081)

Tut1 ENSMUSG00000071645 (Mouse)

Gene Details

terminal uridylyl transferase 1, U6 snRNA-specific

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000093958, Mouse)

Protein Percentage 71.14%
CDS Percentage 72.6%
Ka/Ks Ratio 0.1713 (Ka = 0.2041, Ks = 1.1914)

Tut1 ENSRNOG00000020047 (Rat)

Gene Details

terminal uridylyl transferase 1, U6 snRNA-specific (Tut1), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000027187, Rat)

Protein Percentage 71.62%
CDS Percentage 73.52%
Ka/Ks Ratio 0.18105 (Ka = 0.1971, Ks = 1.0888)

Genome Location

Sequence Coding sequence

Length: 2544 bp    Location: 1123891..1113339   Strand: -
Raw sequence   
>XM_004874368.1
ATGGCGGCGGTGGATTCGGATGTCGAATCGCTGCCGCGTGGGGGTTTCCGCTGCTGCCTCTGCCACGTTACGACAGCCAACCGACCCAGCCTAGATGCCCATTTGGGAGGCCGGAAGCACCGGCATCTGGTAGAACTTCGAGCTGCCAGAAAGGCCCAGGGCCTTCGGAGTGTGTTTGTCAGTGGTTTCCCCAGGGATGTAGATTCTACAGAGCTCTCTGAATACTTCCAGGCATTTGGACCTGTGGCCAGCGTGGTCATGGACAAGGACAAGGGCGTGTTTGCCATCGTGGAGATGGGGGACATGGGCTCCCGGGATGCTGCCCTGGCCCAGCCCCAGCACAGCCTACGAGGACAGCGTCTGCGCGTGCGGCCTCGGGAGCAGAAGGCGTTCCAGAGCCCAGGCTCCAGGGCCCTCCGGGGTGCTGCCCCCGAGGACAGTGGCCAGCTGCTCAGTGCACTGGCCGAGGCCCCAGACGTGGGCACACAGATGATGAAGCTGGTGGCGCTGCGGGAACTGTCCGAGGCGGAGCGGCAGCTGCGGTGCCTGGTGGTGGCCCTGATGCAGGAAGTCTTCACAGAATTCTTCCCTGGCTGTGCAGTCCACCCTTTTGGCTCTTCCACAAATAGCTTTGATGTCCATGGGTGTGATCTTGACCTCTTCCTGGATCTGGGAGAGCTGGATGAGCCTCAGCAGGTCCCGAAGGCTCCGGAGTCTCCGTCCTTGGACTCTGCCCTTGCCTCCCCCTTGGATCCTCAGGCCTGCACCCCAGCCTCCCCTGCGGACTCGCAGCCCCCAACGTCTCCCCAAGACTCTGAGGCGCTGGACTTTGAGGCCCTGTCCTCCCTAGCACCCCAGACGCCAGACTCTGCTCTGGCCTCTGAGATCCTGGCCTCTCCCCAGTCCCTGCCTCCAGCCTCGCCGCTGCAGGAGGACAGGGGCGAGGGGGACCCCGGGAAGGCCCCGGATGCAGCAGAGGCCCTGGGTGGGGAGAAGCCAGCGGGAGCGGCCATGCTGGAGCTGGTGGGCTCCATCCTGCGGCGCTGTGTCCCTGGCGTCTACCGTGTCCACAGCGTGCCATCGGCCCGGCGCCCTGTGGTGAAGTTCTGCCATCGGCCCTCGGGGCTTCATGGTGACGTCTCCCTCGGTAACCGGCTGGCCCTGCACAACTCCCAATTCCTGAGCCTGTGCGCTGAGCTGGATGGGCGAGTCCGGCCCCTCGTGTACACCGTCCGCTGCTGGGCACAGGGCCGAGGGCTGGCAGGGAGCGGCCCCCTCCTCAGCAACTACGCTCTGACCCTGCTCGTGGTCTACTTCCTGCAGACCCGGGACCCACCTGTGTTGCCCACGGTGGCCCAGCTCACCCGGAAAGCAGATGAGGGCGAGCGGGTGGAAGTGGACGGCTGGGACTGCAGTTTCCCCAGGGACGCCCGGAGCCTGGAACCCAGCGCCAACGTGGAGCCCCCGGGCGCCCTGCTGGCCCAGTTCTTCTTCTGTGTCTCCTGCTGGGATCTCCGTGGCTCTCTGCTGTCCCTACGGGAGGGCCGCGCGCTGCCTGTGGCCGGGGGACAGCCTGCCATATTCTGGGAGGGTCTGCGTCTGGGCCCCATGAATCTTCAGGACCCCTTTGAGCTGAGTCACAACGTGGCCGCCAATGTGACCAGCCGAGTGGCCGGGAGGCTGCAGAACTGCTGCCGGGCTGCAGCCAGTTACTGCCGGAGCCTGCAGTATCTGCGCCGCTCGGCCCGCGGCCGGGACTGGGGGCTGCTGCCGCTCCTGCAGTCAAGCTCCCCTGCCTCGCTGCTCGCGGCCACTCCCATCCCCCTGCCGGTCGTGCCCTTCCCCCAGCTCTGCACTGCCCTGGTCCGGGTGCTGCGGGACGCTCTGGGGTGCCAGGTTGAACAGGGGACAAAGAGGCCGAGGCCCAAAGCGGGGATGGAGGAGGCTGCTCAGGGAGGAGCTGGGAAGAGACTGAAGCTAGATGGGCACGGAGAGGGCGGCGAGGACAGGGCCGAGGAGCCTTGGGGACACGCGGGGGACCTCCACGGGGAAGTAGTGGAGGAGATGGTCGTGGAGGTTGGCGAGACGGTGCCGGACTCGGCTATGTGGAGCCCAGGGCAGGCGGGAGACCCGCCAGGGGTGGCTGGCCACCGCGAAGGACCGGACCACCCAGCGCAGGCCCAGCCACGCCCCAGCTGTGCCAGCTGGCGCTGCGCCCTGTGGCACCGCACGTGGCAGGGGCGGCGGCGAGCCCGGCGGCGCCTGCAGCAGCAGCAGCAGCGGGAGGGCCAGAGGGGTGACGCAGGGGCCGGGTGGCTGGCGACTGAGGCCCAGGTGACCCAGGAGCTGGCCAGACCCAGCGGCGGGGAGCGGGGAGCAGGAGCCGAGCCCCTTGTGGCCTTCATGGCGAGCGCGAGCGCGTCCGAAGCCGAGGGGATGCTCTCAGTTACCCCGCTGCGGGACGCGCAGGGTCTGTTCCCTGAGCTGCACCACTTCCTGCAAGGCTTCGTGCCCCAGGCGCTGCGCCAGGCAATAAAGCAATGA

Related Sequences

XP_004874425.1 Protein

Tut1 PREDICTED: speckle targeted PIP5K1A-regulated poly(A) polymerase isoform X4 [Heterocephalus glaber]

Length: 847 aa      View alignments
>XP_004874425.1
MAAVDSDVESLPRGGFRCCLCHVTTANRPSLDAHLGGRKHRHLVELRAARKAQGLRSVFVSGFPRDVDSTELSEYFQAFGPVASVVMDKDKGVFAIVEMGDMGSRDAALAQPQHSLRGQRLRVRPREQKAFQSPGSRALRGAAPEDSGQLLSALAEAPDVGTQMMKLVALRELSEAERQLRCLVVALMQEVFTEFFPGCAVHPFGSSTNSFDVHGCDLDLFLDLGELDEPQQVPKAPESPSLDSALASPLDPQACTPASPADSQPPTSPQDSEALDFEALSSLAPQTPDSALASEILASPQSLPPASPLQEDRGEGDPGKAPDAAEALGGEKPAGAAMLELVGSILRRCVPGVYRVHSVPSARRPVVKFCHRPSGLHGDVSLGNRLALHNSQFLSLCAELDGRVRPLVYTVRCWAQGRGLAGSGPLLSNYALTLLVVYFLQTRDPPVLPTVAQLTRKADEGERVEVDGWDCSFPRDARSLEPSANVEPPGALLAQFFFCVSCWDLRGSLLSLREGRALPVAGGQPAIFWEGLRLGPMNLQDPFELSHNVAANVTSRVAGRLQNCCRAAASYCRSLQYLRRSARGRDWGLLPLLQSSSPASLLAATPIPLPVVPFPQLCTALVRVLRDALGCQVEQGTKRPRPKAGMEEAAQGGAGKRLKLDGHGEGGEDRAEEPWGHAGDLHGEVVEEMVVEVGETVPDSAMWSPGQAGDPPGVAGHREGPDHPAQAQPRPSCASWRCALWHRTWQGRRRARRRLQQQQQREGQRGDAGAGWLATEAQVTQELARPSGGERGAGAEPLVAFMASASASEAEGMLSVTPLRDAQGLFPELHHFLQGFVPQALRQAIKQ