Details from NCBI annotation

Gene Symbol Shkbp1
Gene Name SH3KBP1 binding protein 1, transcript variant X2
Entrez Gene ID 101698651

Database interlinks

Part of NW_004624925.1 (Scaffold)

For more information consult the page for NW_004624925.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

SHKBP1 ENSCPOG00000009272 (Guinea pig)

Gene Details

SH3KBP1 binding protein 1

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000008324, Guinea pig)

Protein Percentage 94.18%
CDS Percentage 91.9%
Ka/Ks Ratio 0.09937 (Ka = 0.0286, Ks = 0.2879)

SHKBP1 ENSG00000160410 (Human)

Gene Details

SH3KBP1 binding protein 1

External Links

Gene Match (Ensembl Protein ID: ENSP00000291842, Human)

Protein Percentage 93.18%
CDS Percentage 88.87%
Ka/Ks Ratio 0.06656 (Ka = 0.0342, Ks = 0.5143)

Shkbp1 ENSMUSG00000089832 (Mouse)

Gene Details

Sh3kbp1 binding protein 1

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000003857, Mouse)

Protein Percentage 91.05%
CDS Percentage 85.7%
Ka/Ks Ratio 0.06642 (Ka = 0.045, Ks = 0.6777)

Shkbp1 ENSRNOG00000020882 (Rat)

Gene Details

Sh3kbp1 binding protein 1 (Shkbp1), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000028348, Rat)

Protein Percentage 90.2%
CDS Percentage 85.23%
Ka/Ks Ratio 0.07197 (Ka = 0.0497, Ks = 0.6908)

Genome Location

Sequence Coding sequence

Length: 2115 bp    Location: 529182..542223   Strand: +
>XM_004874210.1
ATGGCTGTGGCCGCAATTGTAACCGAGGGGATCCCAGGTCGGGGTCCTCCCGGGGAAGTGGTTCATCTGAACGTAGGAGGCAAAAGATTCAGTACCTCTCGCCAGACTCTCACCTGGATCCCAGACTCTTTCTTCTCCAGTCTGCTGAGCGGACGCATCTCAACTCTGAAAGATGAGACCGGAGCAATCTTCATCGACAGGGACCCCACCATCTTTGCCCCCATCCTCAACTTCCTGCGCACCAAAGAGTTAGACCCCAGGGGTGTCCACGGTTCCAGCCTCCTCCACGAAGCCCAGTTCTATGGACTCACTCCACTGGTTCGTCGCCTGCAGCTTCGGGAGGAGCTGGATCGATCTTCTTGTGGAAACGTCCTCTTCAATGGTTATCTGCCCCCACCAGTATTCCCAGTGAAGCAGCGAAACCGGCACAGCCTGGTGGGATCCCAGCAGGTAGGGGGGCGCCTGGCCACTGTCCGGCGAAGCAACACGATGCCCCCCAACCTGGGCAATGCAGGGCTTCTGGGCCGAATGCTGGCTGAGAAAGCCCCTCCCTCACCCTCAGGGCAATTGGAAGAGGCGGGCATGGTGCGCCTAGTGTGTGGACACAACAACTGGATTGCTGTGGCCTATACCCAGTTTCTTGTCTGCTATAGGCTGAAGGAGGCCTCCGGCTGGCAGCTGGTGTTTTCCAGCCCCCGCCTGGACTGGCCCATTGAGCGCCTGGCTCTCACAGCCCGGGTGCCTGGTGGGGCTTTGGGCGAGCATGACAAGATGGTGGCTGCAGCCACTGGCAGTGAGATCCTGCTGTGGACTCTGCAGCCAGAAGGCAGTGGCTCTGAGATAGGAGTCTTCCACCTGGGTGTGCCTGTGGAGGCCTTGTTCTTTGTGGGGAACCAGCTCATTGCCACGAGCCACACCGGGCGCATCGGCGTGTGGAACGCCGTCACCAAGCACTGGCAGGTCCAGGAGGTGCAGCCCATCACCAGCTATGACGCAGCTGGCTCCTTCCTCCTCCTGGGATGCAGCAATGGGTCCATCTACTATGTGGACGTGCAGAAGTTCCCTCTTCGGATGAAGGACAATGACCTCCTGGTCAGTGAGCTCTACCGGGACCCGGCAGAGGATGGCGTCACTGCCCTCAGTGTCTACCTCACCCCGAAGACCAGTGACAGTGGGAACTGGATCGAGATCGCCTACGGCACCAGCTCTGGGGGTGTGCGGGTCATCGTGCAGCACCCCGAGACAGTGGGCTCAGGGCCCCAGCTCTTCCAGACCTTCACTGTGCACCGCAGCCCCGTCACCAAGATCATGCTGTCGGAGAAGCACCTCATCTCAGTCTGTGCCGACAACAACCATGTGCGGACGTGGTCTGTGACTCGCTTCCGGGGCATGATTTCCACCCAGCCGGGCTCCACCCCGCTTGCCTCCTTCAAGATCCTGGCGCTGGAGTCGGCGGATGGCCATGGCGGCTGCAGTGCTGGCAATGACATTGGCCCCTATGGTGAGCGAGATGATCAACAGGTGTTCGTTCAGAAGGTGGTGCCGAGTGCCAGCCAGCTCTTTGTGCGCCTGTCATCCACGGGCCAGCGAGTGTGCTCCGTGCGCTCGGTGGATGGCTCGCCCACGACCGCCTTCACAGTGCTGGAGTGTGAGGGCTCCCGGCGGCTGGGCTCAAGGTCCCGGCGCTACCTGCTCACTGGCCAGGCCAATGGTAGCCTGGCCATGTGGGACCTGACCACTGCGATGGACGGCCTCGGCCAGGCCCCAGCAGGTGGCCTGACAGAGGAGGAGCTAATGGGACAGCTGGAGCAGTGTGAGCTGGCCCCCCTGGCTTCCTCGCGCAGTGCCGTCCCCAGCCCCTCCGCCCGTGCCTCCCTCACCAGTCTCCACTCAGCCTCCAGCAGCACTTCCCTGTCTGGCCACCGTGGGAGCCCCAGCCCCCCACAGGTGGAGGCCCGGCGCCGTGGGGGTGGCAGCTTTGTGGAGCGCTGCCAGGAGCTGGTACGGAGCACGCCCGAGCCCCAGAGGCCACCAACTCCAGCCCCTCGGCCCTCCACAGGTCTTGGGGCTCCCCTCATGCCTCCCAAGAAGAAGCTCAGCGAAACTTCCTTTTGA

Related Sequences

XP_004874267.1 Protein

Shkbp1 PREDICTED: SH3KBP1-binding protein 1 isoform X2 [Heterocephalus glaber]

Length: 704 aa      View alignments
>XP_004874267.1
MAVAAIVTEGIPGRGPPGEVVHLNVGGKRFSTSRQTLTWIPDSFFSSLLSGRISTLKDETGAIFIDRDPTIFAPILNFLRTKELDPRGVHGSSLLHEAQFYGLTPLVRRLQLREELDRSSCGNVLFNGYLPPPVFPVKQRNRHSLVGSQQVGGRLATVRRSNTMPPNLGNAGLLGRMLAEKAPPSPSGQLEEAGMVRLVCGHNNWIAVAYTQFLVCYRLKEASGWQLVFSSPRLDWPIERLALTARVPGGALGEHDKMVAAATGSEILLWTLQPEGSGSEIGVFHLGVPVEALFFVGNQLIATSHTGRIGVWNAVTKHWQVQEVQPITSYDAAGSFLLLGCSNGSIYYVDVQKFPLRMKDNDLLVSELYRDPAEDGVTALSVYLTPKTSDSGNWIEIAYGTSSGGVRVIVQHPETVGSGPQLFQTFTVHRSPVTKIMLSEKHLISVCADNNHVRTWSVTRFRGMISTQPGSTPLASFKILALESADGHGGCSAGNDIGPYGERDDQQVFVQKVVPSASQLFVRLSSTGQRVCSVRSVDGSPTTAFTVLECEGSRRLGSRSRRYLLTGQANGSLAMWDLTTAMDGLGQAPAGGLTEEELMGQLEQCELAPLASSRSAVPSPSARASLTSLHSASSSTSLSGHRGSPSPPQVEARRRGGGSFVERCQELVRSTPEPQRPPTPAPRPSTGLGAPLMPPKKKLSETSF