Details from NCBI annotation

Gene Symbol Psmc4
Gene Name proteasome (prosome, macropain) 26S subunit, ATPase, 4, transcript variant X1
Entrez Gene ID 101717896

Database interlinks

Part of NW_004624925.1 (Scaffold)

For more information consult the page for NW_004624925.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

PSMC4 ENSCPOG00000003943 (Guinea pig)

Gene Details

proteasome (prosome, macropain) 26S subunit, ATPase, 4

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000003561, Guinea pig)

Protein Percentage 99.76%
CDS Percentage 94.66%
Ka/Ks Ratio 0.00469 (Ka = 0.0011, Ks = 0.2399)

PSMC4 ENSG00000013275 (Human)

Gene Details

proteasome (prosome, macropain) 26S subunit, ATPase, 4

External Links

Gene Match (Ensembl Protein ID: ENSP00000157812, Human)

Protein Percentage 100.0%
CDS Percentage 92.11%
Ka/Ks Ratio 0.001 (Ka = 0.0004, Ks = 0.4372)

Psmc4 ENSMUSG00000030603 (Mouse)

Gene Details

proteasome (prosome, macropain) 26S subunit, ATPase, 4

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000032824, Mouse)

Protein Percentage 99.76%
CDS Percentage 90.11%
Ka/Ks Ratio 0.00371 (Ka = 0.0022, Ks = 0.5981)

Psmc4 ENSRNOG00000018994 (Rat)

Gene Details

proteasome (prosome, macropain) 26S subunit, ATPase, 4 (Psmc4), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000025819, Rat)

Protein Percentage 99.76%
CDS Percentage 90.67%
Ka/Ks Ratio 0.00407 (Ka = 0.0022, Ks = 0.5418)

Genome Location

Sequence Coding sequence

Length: 1257 bp    Location: 119967..127678   Strand: +
>XM_004874168.1
ATGGAGGAGATAGGCATCTTGGTGGAGAAGGCTCAGGATGAGATCCCAGCACTGTCTGTGTCCCGGCCCCAGACTGGCCTGTCCTTCCTGGGGCCAGAGCCTGAGGATCTGGAAGACCTGTACAGCCGCTACAAGAAGCTACAGCAAGAGCTGGAGTTCCTGGAGGTACAAGAGGAGTACATCAAGGATGAGCAAAAGAACCTGAAGAAGGAATTCCTCCACGCCCAGGAGGAGGTGAAGCGAATTCAGAGCATCCCACTGGTCATTGGGCAGTTTCTGGAGGCTGTGGATCAGAACACAGCCATCGTGGGCTCTACCACAGGCTCCAACTATTATGTGCGCATTCTGAGTACCATAGATCGAGAACTGCTCAAGCCCAATGCCTCAGTAGCCCTACATAAGCACAGCAATGCCCTGGTGGATGTGCTTCCTCCCGAGGCCGACAGCAGCATCATGATGCTCACATCAGACCAGAAGCCAGATGTGATGTACGCGGACATTGGGGGCATGGATATCCAGAAGCAGGAGGTGCGGGAGGCTGTGGAGCTCCCACTTACACACTTTGAGCTCTATAAGCAGATTGGCATTGATCCTCCTCGAGGGGTCCTCATGTACGGCCCACCTGGCTGCGGGAAGACCATGTTGGCAAAGGCTGTGGCACATCACACGACAGCTGCATTTATCCGGGTTGTGGGCTCAGAGTTTGTACAGAAGTACCTGGGCGAGGGCCCCCGCATGGTCCGAGATGTGTTCCGCCTGGCCAAGGAGAATGCACCTGCCATCATCTTCATAGACGAGATTGATGCCATTGCCACCAAGAGATTCGATGCCCAGACGGGAGCTGACAGGGAGGTTCAGAGAATCCTTCTGGAGCTGCTAAATCAAATGGATGGATTTGACCAGAACGTCAACGTCAAGGTGATCATGGCCACGAACAGAGCAGATACGCTGGATCCAGCCCTGCTGCGACCGGGACGCTTGGACCGCAAAATCGAATTTCCTCTCCCTGACCGCCGCCAAAAGAGATTGATTTTCTCCACTATCACCAGCAAGATGAACCTCTCGGAGGAGGTTGACTTGGAAGACTATGTGGCCCGGCCAGATAAGATTTCAGGAGCTGACATCAACTCCATCTGTCAAGAGAGTGGAATGTTGGCTGTCCGAGAGAACCGCTACATTGTCCTGGCCAAGGACTTTGAGAAAGCGTACAAGACTGTCATCAAGAAGGATGAGCAGGAGCATGAGTTTTATAAGTGA

Related Sequences

XP_004874225.1 Protein

Psmc4 PREDICTED: 26S protease regulatory subunit 6B isoform X1 [Heterocephalus glaber]

Length: 418 aa      View alignments
>XP_004874225.1
MEEIGILVEKAQDEIPALSVSRPQTGLSFLGPEPEDLEDLYSRYKKLQQELEFLEVQEEYIKDEQKNLKKEFLHAQEEVKRIQSIPLVIGQFLEAVDQNTAIVGSTTGSNYYVRILSTIDRELLKPNASVALHKHSNALVDVLPPEADSSIMMLTSDQKPDVMYADIGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQNVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLIFSTITSKMNLSEEVDLEDYVARPDKISGADINSICQESGMLAVRENRYIVLAKDFEKAYKTVIKKDEQEHEFYK