Details from NCBI annotation

Gene Symbol Rasgef1a
Gene Name RasGEF domain family, member 1A, transcript variant X3
Entrez Gene ID 101719863

Database interlinks

Part of NW_004624922.1 (Scaffold)

For more information consult the page for NW_004624922.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

RASGEF1A ENSCPOG00000011430 (Guinea pig)

Gene Details

RasGEF domain family, member 1A

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000010275, Guinea pig)

Protein Percentage 98.74%
CDS Percentage 93.08%
Ka/Ks Ratio 0.00961 (Ka = 0.0053, Ks = 0.5492)

RASGEF1A ENSG00000198915 (Human)

Gene Details

RasGEF domain family, member 1A

External Links

Gene Match (Ensembl Protein ID: ENSP00000379154, Human)

Protein Percentage 93.71%
CDS Percentage 88.68%
Ka/Ks Ratio 0.0287 (Ka = 0.027, Ks = 0.9409)

Rasgef1a ENSMUSG00000030134 (Mouse)

Gene Details

RasGEF domain family, member 1A

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000132244, Mouse)

Protein Percentage 93.92%
CDS Percentage 86.65%
Ka/Ks Ratio 0.02625 (Ka = 0.0287, Ks = 1.0931)

Rasgef1a ENSRNOG00000031671 (Rat)

Gene Details

Protein Rasgef1a

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000046078, Rat)

Protein Percentage 94.13%
CDS Percentage 87.0%
Ka/Ks Ratio 0.02629 (Ka = 0.0277, Ks = 1.0556)

Genome Location

Sequence Coding sequence

Length: 1434 bp    Location: 498128..471969   Strand: -
>XM_004874102.1
ATGCCCCAGACATCTGTGGTCTTCTCCGGTATCCTTGGGCCCGGTGGTAGCGGACAGGTGCAGCCCGGCATGGGGGAGAGGGGCAGTGGCGCTGGGGACCTCATCTTCCAAGACGGACGCCTTGTCTCCGGGTCCTTGGAGGCCTTGATGGAGCACCTGGTCCCCACTGTGGACTACTACCCTGATAGGACATTCATCTTCACCTTCCTGCTGACCTCCCGAGTCTTCATGCCCCCGCATGACCTGCTGGCCCGCGTTGGGCAGATCTGCCTGGAGCAGAGGCAGCAGCTGGAGCCTGGGCCTGAGAAGGCCAAGCTGAAGTCCTTCTCCGCCAAGATCGTGCAGCTCCTGAAGGAGTGGACAGAGGCCTTTCCCTATGACTTTCAGGATGAGAAGGCCCTTGGCGAGCTCAAGGCCATTGCGTACCGCGTCACCCAGTGTGATGAGGAGAATGGCACAGTGAAGAAAGCCATCACACAGATGATCCAGAGCCTGCTGCTGTCCTTGGCTGCCCGGAGCCAGCTTCAGGAGCTGCGGGAGAAGCTGCGGCCACCAGCTGTGGACAAGGGGCCTGTGCTGAAGGCAAAGCCGCCGGCAGCACAGAAGGACATCCTGGGCGTGTGCTGTGACCCCCTGGTGCTGGCCCAGCAGCTGACCCATATTGAGCTGGAGAGGGTCAGCAGCATTCACCCTGAGGACCTGATGCAGATCATCAGCCACACAGATTCGCTGGACAACCACAGGTGCCGAGGAGACGTGGCCAAGACTTACAGCCTTGAGGCCTATGACAGTTGGTTCAACTGCCTGAGCATGCTGGTGGCTACCGAAGTGTGCCGGGTGGTGAAGAAGAAGCACCGGACCCGCATGCTGGAGTTCTTCATCGATGTGGCCCGTGAGTGCTTCAACATCGGGAACTTCAACTCCATGATGGCCATCATCTCTGGCATGAACCTCAGTCCTGTGGCACGGCTGAAGAAGACGTGGTCGAAAGTCAAGACGGCCAAGTTTGACGTCCTCGAGCACCACATGGACCCATCCAGCAACTTCTGCAACTACCGCACGGCCCTGCAGGGCGCTACGCAACGGTCCCAGACGGCCAACAGCAGCCGAGAGAAGATCGTCATTCCTGTGTTCAACCTCTTTGTCAAGGACATCTACTTCCTGCACAAAATCCACACCAACCACCTGCCCAACGGACACATCAACTTCAAGAAGTTCTGGGAGATCTCCCGGCAGATCCACGAGTTCATGACCTGGACGCAGGTGGAGTGCCCCTTCGAAAAGGACAAAAAGATTCAGAGCTACCTGCTCACAGCACCCATCTACAGTGAGGAAGCTCTCTTCATCGCCTCCTTTGAGAGTGAAGGCCCCGAGAATCACATGGAGAAGGACAGCTGGAAGGCCCTCAGGACCACGCTGCTTCACAGAGCCTGA

Related Sequences

XP_004874159.1 Protein

Rasgef1a PREDICTED: ras-GEF domain-containing family member 1A isoform X3 [Heterocephalus glaber]

Length: 477 aa      View alignments
>XP_004874159.1
MPQTSVVFSGILGPGGSGQVQPGMGERGSGAGDLIFQDGRLVSGSLEALMEHLVPTVDYYPDRTFIFTFLLTSRVFMPPHDLLARVGQICLEQRQQLEPGPEKAKLKSFSAKIVQLLKEWTEAFPYDFQDEKALGELKAIAYRVTQCDEENGTVKKAITQMIQSLLLSLAARSQLQELREKLRPPAVDKGPVLKAKPPAAQKDILGVCCDPLVLAQQLTHIELERVSSIHPEDLMQIISHTDSLDNHRCRGDVAKTYSLEAYDSWFNCLSMLVATEVCRVVKKKHRTRMLEFFIDVARECFNIGNFNSMMAIISGMNLSPVARLKKTWSKVKTAKFDVLEHHMDPSSNFCNYRTALQGATQRSQTANSSREKIVIPVFNLFVKDIYFLHKIHTNHLPNGHINFKKFWEISRQIHEFMTWTQVECPFEKDKKIQSYLLTAPIYSEEALFIASFESEGPENHMEKDSWKALRTTLLHRA