Details from NCBI annotation

Gene Symbol Casp1
Gene Name caspase 1, apoptosis-related cysteine peptidase
Entrez Gene ID 101725179

Database interlinks

Part of NW_004624918.1 (Scaffold)

For more information consult the page for NW_004624918.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

CASP1 ENSCPOG00000026333 (Guinea pig)

Gene Details

caspase 1, apoptosis-related cysteine peptidase

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000021241, Guinea pig)

Protein Percentage 65.09%
CDS Percentage 78.55%
Ka/Ks Ratio 0.85094 (Ka = 0.2507, Ks = 0.2946)

CASP1 ENSG00000137752 (Human)

Gene Details

caspase 1, apoptosis-related cysteine peptidase

External Links

Gene Match (Ensembl Protein ID: ENSP00000433138, Human)

Protein Percentage 68.17%
CDS Percentage 78.61%
Ka/Ks Ratio 0.4783 (Ka = 0.2086, Ks = 0.4361)

Casp1 ENSMUSG00000025888 (Mouse)

Gene Details

caspase 1

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000027015, Mouse)

Protein Percentage 63.73%
CDS Percentage 73.47%
Ka/Ks Ratio 0.38513 (Ka = 0.2589, Ks = 0.6723)

Casp1 ENSRNOG00000007372 (Rat)

Gene Details

caspase 1 (Casp1), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000009993, Rat)

Protein Percentage 61.46%
CDS Percentage 70.7%
Ka/Ks Ratio 0.33815 (Ka = 0.2846, Ks = 0.8416)

Genome Location

Sequence Coding sequence

Length: 1200 bp    Location: 113362..135737   Strand: +
>XM_004874014.1
ATGGCTGATGTGATCTTGCAGGGAAAAAGGAAGCAATTTGTTCGTTCAGTTGGCACAGGTACAATAAATGGTTTGCTGGATGAATTACTAGAGAAAAGAGTGCTGAACAAGGAAGAAGTGGAGATTGTAAGATCTGGAAATGTGATACTTATGGATAAGGCCCGAGCTTTGGTGGATGCCCTCATTGGAAAAGGGCCCCAGGCCTGCCAAATTTGTATCAGTTACATCTGTGAAGAAGATTGCCACCTTGCTGAGACACTGGGGCTCTCCTCAGGTCAACAAACTGACAATAACCCTCAAGAAGTATTTTCTTCTTCCTCAGCTTCTCAAGAAGTACAGGTCAACCAAGCTGTGTTCACATCCCCAAGACCAGTAGGAAACCTTCAGCTTTGCCCTCTGGAAACAGCCAAAAGAATATGGAAAGAAAAGTCAGCAGAGATTTATCCAATAATGGGTAAGTTGACCCGCACACGTCTTGCCCTCATCATCTGCAATACAGAGTTTGACAGTCTGCCCAGAAGGAACGGAGCTGAAGTTGACGTCAGAGATATGAAAATGCTGTTAGAAGGTCTGGGATACCAAGTGATTGTGAGAGAAAATCTCACTGCTTCGGAAATGGCTACAGAGGTAAAGGCATTTGCTGCCCAGCCAGAGCACAAGACATCTGACAGCACTTTCCTGGTGATCATGTCTCATGGTAATCCAGATGGCATCTGTGGAAAGAAACACTCTACAGAAGTCTCAGATGTATTGAAAGTCGACATCATCTTTTCAGTGTTGAACACTAGGAACTGTCCAAGTTTGAAGGACAAGCCCAAGGTGATCATCATCCAAGCCTGCCGTGGTGAGAACGAAGGAGTGGTGTGGGTAGAGGATTTGACAGAAGACTCTGGAAACAAAATTTTATTCAATCCAGAAGATTTTGAGAATGATGCCATTAAGAAAGCCCATGTAGAGAAGGATTTTATTGCTTTCTACTCTACAACACCAGACAATGTTTCTTGGCGACATCCCAAATGGGGGTCTGTTTTTATTATAAAACTCATCAAAAATATGCAAGAATATGCCTGGTGCTGTGACCTGCAGGAAATTTTCCGAAAGGTTCGATTTTCATTTGAAAATTCAGATCGTTTTGCACAGATGCCCACTACTGACAGAGTGACTTTGACAAGATATTTCTATCTCTTCCCAGGACATTAA

Related Sequences

XP_004874071.1 Protein

Casp1 PREDICTED: caspase-1 [Heterocephalus glaber]

Length: 399 aa      View alignments
>XP_004874071.1
MADVILQGKRKQFVRSVGTGTINGLLDELLEKRVLNKEEVEIVRSGNVILMDKARALVDALIGKGPQACQICISYICEEDCHLAETLGLSSGQQTDNNPQEVFSSSSASQEVQVNQAVFTSPRPVGNLQLCPLETAKRIWKEKSAEIYPIMGKLTRTRLALIICNTEFDSLPRRNGAEVDVRDMKMLLEGLGYQVIVRENLTASEMATEVKAFAAQPEHKTSDSTFLVIMSHGNPDGICGKKHSTEVSDVLKVDIIFSVLNTRNCPSLKDKPKVIIIQACRGENEGVVWVEDLTEDSGNKILFNPEDFENDAIKKAHVEKDFIAFYSTTPDNVSWRHPKWGSVFIIKLIKNMQEYAWCCDLQEIFRKVRFSFENSDRFAQMPTTDRVTLTRYFYLFPGH