Details from NCBI annotation

Gene Symbol Cdc40
Gene Name cell division cycle 40
Entrez Gene ID 101706880

Database interlinks

Part of NW_004624916.1 (Scaffold)

For more information consult the page for NW_004624916.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

CDC40 ENSCPOG00000010967 (Guinea pig)

Gene Details

cell division cycle 40

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000009855, Guinea pig)

Protein Percentage 98.79%
CDS Percentage 95.22%
Ka/Ks Ratio 0.03138 (Ka = 0.0063, Ks = 0.2002)

CDC40 ENSG00000168438 (Human)

Gene Details

cell division cycle 40

External Links

Gene Match (Ensembl Protein ID: ENSP00000357928, Human)

Protein Percentage 98.62%
CDS Percentage 95.34%
Ka/Ks Ratio 0.03123 (Ka = 0.0062, Ks = 0.1997)

Cdc40 ENSMUSG00000038446 (Mouse)

Gene Details

cell division cycle 40

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000044305, Mouse)

Protein Percentage 98.79%
CDS Percentage 90.85%
Ka/Ks Ratio 0.01246 (Ka = 0.0057, Ks = 0.4577)

Cdc40 ENSRNOG00000000581 (Rat)

Gene Details

cell division cycle 40 (Cdc40), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000058923, Rat)

Protein Percentage 99.1%
CDS Percentage 89.12%
Ka/Ks Ratio 0.00684 (Ka = 0.0042, Ks = 0.6105)

Genome Location

Sequence Coding sequence

Length: 1740 bp    Location: 1302420..1352986   Strand: +
>XM_004873979.1
ATGTCGGCTGCAATTGCATCTCTCGCCGCTTCCTATGGTTCGGGTTCAGGGTCCGAATCAGACTCCGACAGTGAGGGCAGTCGATGTCCGCTGCCAGCCGCCGACTCCCTCATGCACTTGACTAAGTCGCCTTCGGCCAAGTCATCTCTAGCAGTGGCGGTGGACTCGGCTCCAGAGGTTGCAGTTAAGGAAGACTTGGAGACTGGAGTTCACCTTGACCCTGCTGTTAAGGAAGTTCAGTATAATCCTACCTATGAGACCATGTTTGCTCCTGAGTTTGGACCAGAAAATCCTTTTAGAACACAGCAAATGGCTGCTCCTAGAAATATGCTTTCTGGATATGCTGAACCAGCTCATATCAATGATTTCATGTTTGAACAGCAAAGGAGAACTTTTGTCACATATGGTTATGCATTGGATCCTTCATTAGATAATCATCAAGTATCTGCTAAATATATTGGTTCTGTAGAAGAAGCTGAAAAAAATCAAGGTCTAACTGTATTTGAAACTGGTCAGAAGAAAACAGAAAAGAGAAAAAAGTTCAAAGAAAATGATGCATCTAATATTGATGGTTTCTTGGGACCATGGGCAAAATATGTGGATGAAAAAGATGTAGCCAAACCATCAGAGGAAGAGCAAAAAGAATTGGATGAAATCACAGCAAAGAGGCAGAAAAAAGGCAAACAGGAAGAAGAGAAACCTGGGGAGGAGAAGACAATCTTACATGTTAAAGAAATGTATGACTATCAAGGCAGGTCCTATCTTCACATACCTCAGGATGTTGGTGTTAATCTACGGTCCACTATACCACCTGAAAAGTGTTATCTTCCCAAAAAACAAATTCATGTGTGGTCTGGACACACAAAGGGTGTCAGTGCAGTAAGATTGTTTCCCCTCTCTGGCCATTTATTGCTGTCTTGTTCCATGGACTGTAAAATTAAGCTATGGGAGGTTTATGGAGACCGGCGCTGTCTACGAACATTTATTGGTCACGGTAAAGCTGTTAGGGACATCTGTTTCAATACTGCAGGAACCCAGTTCCTCAGCGCAGCCTATGACAGGTATCTGAAACTCTGGGACACTGAGACAGGACAATGTATATCAAGATTCACAAACCGAAAAGTACCCTATTGTGTCAAATTCAATCCTGATGAAGATAAACAAAATCTTTTTGTGGCTGGGATGTCTGATAAAAAGATTGTGCAATGGGACATTCGAAGTGGAGAAATTGTGCAGGAATATGATCGACATTTGGGAGCTGTCAACACCATTGTTTTTGTTGATGAGAACAGAAGATTTGTGAGTACATCTGATGATAAGAGCTTAAGAGTTTGGGAATGGGATATCCCTGTGGATTTCAAGTATATAGCTGAACCCAGTATGCACTCAATGCCTGCAGTGACTTTGTCTCCAAATGGGAAATGGCTAGCATGCCAATCAATGGATAACCAAATCTTAATTTTTGGAGCACAGAACAGATTCAGACTGAATAAGAAAAAAATTTTTAAGGGCCATATGGTAGCAGGCTATGCTTGTCAAGTGGACTTTTCACCAGACATGAGCTATGTGATTTCAGGAGATGGAAATGGAAAATTAAACATTTGGGACTGGAAGACCACAAAACTCTACAGTCGGTTTAAAGCTCATGATAAAGTGTGTATAGGTGCAGTGTGGCATCCTCATGAAACATCTAAGGTCATCACATGTGGCTGGGATGGTCTCATTAAATTGTGGGATTAA

Related Sequences

XP_004874036.1 Protein

Cdc40 PREDICTED: pre-mRNA-processing factor 17 [Heterocephalus glaber]

Length: 579 aa      View alignments
>XP_004874036.1
MSAAIASLAASYGSGSGSESDSDSEGSRCPLPAADSLMHLTKSPSAKSSLAVAVDSAPEVAVKEDLETGVHLDPAVKEVQYNPTYETMFAPEFGPENPFRTQQMAAPRNMLSGYAEPAHINDFMFEQQRRTFVTYGYALDPSLDNHQVSAKYIGSVEEAEKNQGLTVFETGQKKTEKRKKFKENDASNIDGFLGPWAKYVDEKDVAKPSEEEQKELDEITAKRQKKGKQEEEKPGEEKTILHVKEMYDYQGRSYLHIPQDVGVNLRSTIPPEKCYLPKKQIHVWSGHTKGVSAVRLFPLSGHLLLSCSMDCKIKLWEVYGDRRCLRTFIGHGKAVRDICFNTAGTQFLSAAYDRYLKLWDTETGQCISRFTNRKVPYCVKFNPDEDKQNLFVAGMSDKKIVQWDIRSGEIVQEYDRHLGAVNTIVFVDENRRFVSTSDDKSLRVWEWDIPVDFKYIAEPSMHSMPAVTLSPNGKWLACQSMDNQILIFGAQNRFRLNKKKIFKGHMVAGYACQVDFSPDMSYVISGDGNGKLNIWDWKTTKLYSRFKAHDKVCIGAVWHPHETSKVITCGWDGLIKLWD