Sequence details NCBI ID: XM_004873871.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Clcn7
Gene Name chloride channel, voltage-sensitive 7, transcript variant X1
Entrez Gene ID 101720575

Database interlinks

Part of NW_004624913.1 (Scaffold)

For more information consult the page for NW_004624913.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

CLCN7 ENSCPOG00000012975 (Guinea pig)

Gene Details

chloride channel, voltage-sensitive 7

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000011682, Guinea pig)

Protein Percentage 96.02%
CDS Percentage 93.03%
Ka/Ks Ratio 0.07453 (Ka = 0.0191, Ks = 0.2566)

CLCN7 ENSG00000103249 (Human)

Gene Details

chloride channel, voltage-sensitive 7

External Links

Gene Match (Ensembl Protein ID: ENSP00000372193, Human)

Protein Percentage 94.78%
CDS Percentage 87.23%
Ka/Ks Ratio 0.02668 (Ka = 0.0248, Ks = 0.929)

Clcn7 ENSMUSG00000036636 (Mouse)

Gene Details

chloride channel 7

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000035964, Mouse)

Protein Percentage 95.64%
CDS Percentage 87.01%
Ka/Ks Ratio 0.03338 (Ka = 0.0232, Ks = 0.6947)

Clcn7 ENSRNOG00000016976 (Rat)

Gene Details

chloride channel, voltage-sensitive 7 (Clcn7), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000023615, Rat)

Protein Percentage 95.52%
CDS Percentage 87.42%
Ka/Ks Ratio 0.03709 (Ka = 0.0243, Ks = 0.6549)

Genome Location

Sequence Coding sequence

Length: 2415 bp    Location: 2174010..2142640   Strand: -
Raw sequence   
>XM_004873871.1
ATGGCGAACGTCTCCAAGAAAGTGTCGTGGTCCGGCCGCGACCACGATGACGAGGAAGCGGCTCCGCTGCTGTGGAGGACAGTGCAGCCGGGAGACGGGACGCCGGTGCTGAACGGGGCCGGGCCCACCGGGCCCCAGTCACCTCATTCCGAATCTTCCCAAATCGGTCAGATGAGTGGTGTGGAGGTGGATGAGGAGCTCCTGGACCTGGAAGTGGGCCCTCCCCATCCCTTCCCCAAGGAGATCCCTCACAACGAGAAGCTCCTGTCCCTCAAGTATGAGAGCTTGGATTATGACAACAGTGAAAACCAGCTATTCTTAGAGGAAGAACGACGGATCAACCACACGGCCTTCCGAACAGTGGAGATTAAACGCTGGGTCATATGTGCTCTCATCGGGATCCTCACAGGTCTTGTGGCCTGCTTCATTGACATTGTGGTAGAGAACTTGGCCGGCCTGAAGTACGGGCTCATCAAGGACAATATCGACAAGTTTACAGAGAAGGGTGGACTGTCCTTTTCCCTCCTCTTGTGGGCCACGCTGAACTCTGCCTTCGTGCTCCTTGGCTCCATGATTGTGGCCTTTATAGAGCCAGTTGCTGCCGGCAGTGGGATCCCCCAGATCAAGTGCTTCCTCAACGGGGTGAAGATCCCTCATGTGGTGCGGCTCAAGACGCTAGTGATCAAGGTATCTGGTGTGATTCTGTCTGTGGTAGGAGGACTGGCAGTTGGAAAGGAAGGACCAATGATCCACTCCGGATCAGTGATTGCTGCTGGGATCTCCCAGGGAAGATCAACATCACTGAAGCGAGATTTCAAGATCTTTGAGTACTTCCGCAGGGACACAGAGAAGCGGGACTTTGTCTCAGCAGGAGCTGCAGCTGGAGTGTCTGCTGCATTTGGAGCCCCTGTGGGTGGAGTGCTTTTCAGCCTGGAGGAGGGTGCCTCCTTCTGGAACCAGTTCCTGACGTGGAGGATCTTCTTTGCTTCCATGATTTCTACTTTCACTCTGAATTTTGTTCTGAGCATTTACCATGGAAATATGTGGGACTTGTCCAGTCCAGGCCTCATCAACTTTGGAAGATTTGACTCAGAGAAAATGGCCTACACCATCCATGAGATTCCCGTCTTCATCGCCATGGGTGTGGTGGGTGGCATTCTTGGAGCTGTGTTTAACGCCTTGAATTACTGGCTGACGATGTTTCGAATCAGGTACATCCACCGGCCCTGCCTGCAGGTGATCGAGGCCATGCTGGTGGCCGCTGTGACAGCCACTGTTGCCTTTGTGTTGATTTACTCCTCTCGAGACTGCCAGCCCCTGCAGGGGAACTCCATGTCTTACCCTCTTCAGCTCTTCTGTGCAGATGGCGAGTACAACTCTATGGCTGCAGCATTTTTCAATACCCCAGAGAAGAGTGTAGTGAGCCTCTTCCATGACCCACCAGGCTCCTACAACCCCATGACCCTGGGCCTATTCACCCTGGTTTACTTCTTCCTGGCCTGTTGGACCTACGGGCTCACTGTGTCTGCTGGTGTTTTCATCCCATCCCTACTCATCGGGGCCGCCTGGGGCCGGCTTTTTGGCATCTCCCTGTCCTACCTCACAGGAGCAGCAATCTGGGCAGACCCTGGCAAATATGCCCTGATGGGAGCTGCTGCCCAGCTCGGTGGCATTGTGAGGATGACCCTGAGCCTGACAGTCATCATGATGGAAGCCACAAGCAATGTGACCTATGGCTTCCCCATCATGCTGGTGCTGATGACTGCCAAGATCGTGGGCGATGCCTTCATTGAGGGTCTGTATGACATGCACATCCAGCTACAGAGTGTGCCCTTCCTGCACTGGGAGGCCCCCGTCACCTCACACTCGCTCACTGCCAGGGAGGTGATGAGCACTCCGGTGACATGCCTAAGGAGAAGAGAGAAGGTTGGTGTCATTGTGGATGTCCTCAGCAACACAGCATCCAACCACAATGGCTTCCCTGTGGTGGAGGACTCAGATGACACCCAGCCAGCCCGGCTCCAGGGTTTGATTCTGCGCTCCCAGATCATCGTGCTCTTGAAGCACAAGGTGTTTGTGGAGAGATCCAACATGGGCCTGGTGCAACGGCGGCTGCGGCTAAAGGACTTTCGTGATGCCTACCCACGCTTCCCCCCAATCCAGTCCATCCATGTGTCACAGGATGAGCGCGAGTGCACCATGGACCTCTCCGAGTTTATGAACCCCTCCCCCTACACTGTGCCCCAGGAGGCCTCCCTCCCTCGAGTGTTCAAACTGTTCCGGGCTCTGGGCCTGCGGCATCTGATGGTAGTGGACAACTGCAATCAGGTGGTGGGGCTGGTGACCAGGAAGGACCTGGCCAGGTACCGCCTGGGGAAAGGAGGCCTGGAGGAGCTCTCACTGGCCCAGACGTGA

Related Sequences

XP_004873928.1 Protein

Clcn7 PREDICTED: H(+)/Cl(-) exchange transporter 7 isoform X1 [Heterocephalus glaber]

Length: 804 aa      View alignments
>XP_004873928.1
MANVSKKVSWSGRDHDDEEAAPLLWRTVQPGDGTPVLNGAGPTGPQSPHSESSQIGQMSGVEVDEELLDLEVGPPHPFPKEIPHNEKLLSLKYESLDYDNSENQLFLEEERRINHTAFRTVEIKRWVICALIGILTGLVACFIDIVVENLAGLKYGLIKDNIDKFTEKGGLSFSLLLWATLNSAFVLLGSMIVAFIEPVAAGSGIPQIKCFLNGVKIPHVVRLKTLVIKVSGVILSVVGGLAVGKEGPMIHSGSVIAAGISQGRSTSLKRDFKIFEYFRRDTEKRDFVSAGAAAGVSAAFGAPVGGVLFSLEEGASFWNQFLTWRIFFASMISTFTLNFVLSIYHGNMWDLSSPGLINFGRFDSEKMAYTIHEIPVFIAMGVVGGILGAVFNALNYWLTMFRIRYIHRPCLQVIEAMLVAAVTATVAFVLIYSSRDCQPLQGNSMSYPLQLFCADGEYNSMAAAFFNTPEKSVVSLFHDPPGSYNPMTLGLFTLVYFFLACWTYGLTVSAGVFIPSLLIGAAWGRLFGISLSYLTGAAIWADPGKYALMGAAAQLGGIVRMTLSLTVIMMEATSNVTYGFPIMLVLMTAKIVGDAFIEGLYDMHIQLQSVPFLHWEAPVTSHSLTAREVMSTPVTCLRRREKVGVIVDVLSNTASNHNGFPVVEDSDDTQPARLQGLILRSQIIVLLKHKVFVERSNMGLVQRRLRLKDFRDAYPRFPPIQSIHVSQDERECTMDLSEFMNPSPYTVPQEASLPRVFKLFRALGLRHLMVVDNCNQVVGLVTRKDLARYRLGKGGLEELSLAQT