Sequence details NCBI ID: XM_004873845.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Cacna1h
Gene Name calcium channel, voltage-dependent, T type, alpha 1H subunit
Entrez Gene ID 101712631

Database interlinks

Part of NW_004624913.1 (Scaffold)

For more information consult the page for NW_004624913.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

CACNA1H ENSCPOG00000012293 (Guinea pig)

Gene Details

calcium channel, voltage-dependent, T type, alpha 1H subunit

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000011056, Guinea pig)

Protein Percentage 93.15%
CDS Percentage 90.7%
Ka/Ks Ratio 0.1122 (Ka = 0.0413, Ks = 0.3683)

CACNA1H ENSG00000196557 (Human)

Gene Details

calcium channel, voltage-dependent, T type, alpha 1H subunit

External Links

Gene Match (Ensembl Protein ID: ENSP00000334198, Human)

Protein Percentage 85.21%
CDS Percentage 83.8%
Ka/Ks Ratio 0.07995 (Ka = 0.0787, Ks = 0.9842)

Cacna1h ENSMUSG00000024112 (Mouse)

Gene Details

calcium channel, voltage-dependent, T type, alpha 1H subunit

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000077586, Mouse)

Protein Percentage 87.67%
CDS Percentage 84.23%
Ka/Ks Ratio 0.07243 (Ka = 0.0641, Ks = 0.8854)

Cacna1h ENSRNOG00000033893 (Rat)

Gene Details

calcium channel, voltage-dependent, T type, alpha 1H subunit (Cacna1h), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000042239, Rat)

Protein Percentage 87.19%
CDS Percentage 84.0%
Ka/Ks Ratio 0.07671 (Ka = 0.0676, Ks = 0.8818)

Genome Location

Sequence Coding sequence

Length: 7005 bp    Location: 1890702..1952420   Strand: +
Raw sequence   
>XM_004873845.1
ATGACCGAGGACGCGCCGGCCGCCGACGAGGTTCAGGTGCCCCTGGGCGCGCCGCTTTCTGGCCCTGCGGCGGGAGCATCTCCCTCGAGCCCCGGGGCGCCGGGGAGATCGGCGAAGCGGGGTTCCGGGTCCAGTGCGTCGCCCCCCGAGAGCCCAGCAGTCGAGCGCGGCGCGGAGCTGGGCGCCGGCGAGGAACAGCCCGTCCCGTACCCGGCGCTGGCGGCCACCGTCTTCTTCTGCCTCGGGCAGACCACGCGGCCGCGCAGCTGGTGCCTGCGCCTAGTCTGCAGCCCATGGTTCGAGCACGTCAGCATGCTGGTCATCATGCTCAACTGCGTGACCCTCGGCATGTTCCGGCCCTGTGAGGACGTCGCCTGCCGCTCTGAGCGCTGTAGCATCTTGGAGGCCTTTGATGACTTCATCTTCGCCTTCTTTGCTGTGGAGATGGTTATTAAGATGGTGGCCCTCGGGCTCTTTGGTCAGAAATGCTACCTGGGTGATACCTGGAACAGGCTGGACTTCTTCATTGTCATGGCAGGCATGATGGAGTACTCCCTGGACGGGCACAATGTGAGCCTCTCGGCCATCCGTACCGTGCGCGTGCTGCGGCCACTCCGTGCCATCAACCGCGTGCCTAGTATGCGGATCCTGGTTACCCTGCTGCTGGACACGCTGCCCATGCTCGGGAATGTCCTTCTGCTCTGCTTCTTTGTCTTCTTCATCTTCGGCATTGTGGGTGTGCAGCTCTGGGCCGGCCTGCTGAGGAACCGCTGCTTCCTGGATAGCGCTTTTGTCAGGAACAACAACCTGACCTTCCTGAGGCCATACTACCAGCCAGAGGAGGGTGAGGAGAACCCCTTCATCTGCTCCTCACGCCGTGACAATGGCATGCAGAAGTGCTCGCATATCCCTAGCCGCCGCGAGCTGCGTGTGCAGTGTACGCTAGGCTGGGAGGCGTATGGGCAGCCACCAGCTGAGGCTGCAGGTGCTGGCCGCAACGGCTGCATCAACTGGAACCAGTACTATAATGTCTGCCGCTCAGGGGACTCCAACCCCCACAATGGCGCTATCAGCTTTGACAACATTGGCTATGCCTGGATTGCCATCTTCCAGGTGATCACACTGGAGGGCTGGGTAGACATCATGTACTACGTCATGGACGCCCACTCGTTTTATAACTTCATCTACTTCATCCTGCTCATCATTGTGGGCTCCTTCTTCATGATCAACCTGTGCCTGGTAGTGATCGCCACTCAGTTCTCAGAGACCAAGCAGCGGGAGAACCAGCTGATGCGTGAGCAGCGTGCCCGCTACCTGTCCAATGACAGCACACTGGCCAGCTTCTCGGAACCAGGCAGTTGCTACGAGGAGCTGCTCAAGTACATGGGCCATGTCTTCCGCAAGATCAAGCGCCGTAGCCTTCGGCTCTATGCCCGTTGGCAGAGCCGCTGGCATAAGAAGGCAGACCCCAGTGCCACCCTCCATGGCCAGGGTCCCGGGCAGCGGCAGGCAGGCAGGCGTGCAGCCTCTGTGCACCATCTGGTGTACCACCATCACCACCACCACCACCACCACTACCACTTCAGCCATGGTGGGCCTCGCAGGCCCAATCCTGACCCTAGTGACACCAGGCTGGTCCGGGCTGGTGTGCCTCTCTGCCCACCCTCCCCGGGCCAGGGGCCACCCAACTCTGAGTCTGTGCATAGTATCTATCATGCTGACTGCCATGTGGAGGGGCCACAGGAGAGGGCACGGTTAGCTCATGCTGCAGCCACAGCCACAGCAAACCTCAAGCTAGCCTCGGGATTGGGCACCATGAACTACCCCACCATCCTGCCCTCAAGCAAAGGCAGCCCCAGCCCCAGGCCCAAGGGGAAGCGGAATGCTGGAACCTTGGGGGCCACAGGGCACAGCCCCCTGAGCCTGGGCAGCCCTGACCCCTGTGAGAAGATCCAGCATGCAGTTGGGGAACACGGCCTGGGCCGGACCCCCAGTCACCTGTCAGGCCTGAATGTGCCCTGCTCCCTGCCTAGCCCCCCTGCGGGTACACTCACCTGTGCACTGAAGAGCTGCCCGTACTGTGCCAGCGCCTTGGAGGACCCCGAGTTTGAGTTCAGCGGCTCAGAGAGTGGGGACTCAGATGCCCACGGGGTCTATGAATTCACGCAGGATGTGCGGCATGGTGACTGCCGGGACTCCGTTCGGCCATCCCCCACAGTGGATGTACCAAGCCAGGGCAGTGTGCGGAGACCACAGGGGCAGGCAGCCTCTGGCGAGCCAGGTGGGCTGGGCCGCCTCTGGGCCTCCTTCAGCAGCAAGCTGCGCCGCATTGTGGATAGCAAGTACTTCAACCGTGGCATCATGGTGGCCATCCTCGTCAACACACTGAGCATGGGTGTCGAGTTCCACGAGCAGCCAGATGAGCTGACCAACGCGCTAGAGATCAGCAACATCGTGTTCACCAGCATGTTTGCCCTGGAAATGCTATTGAAGCTGCTGGCCTGCGGCCCACTGGGCTACATCCAGAACCCCTATAACATCTTCGATGGCATCATTGTGATCATCAGTGTCTGGGAGATCGTGGGGCAGGCGGATGGTGGGCTGTCAGTGCTGCGCACCTTCCGGCTTCTGCGGGTGCTGAAGCTGGTGCGGTTTCTGCCGGCCCTGAGGCGGCAGCTTGTGGTGCTCATGAAGACCATGGACAATGTGGCCACCTTCTGCATGCTGCTCATGCTGTTCATCTTCATCTTCAGTATCCTGGGTATGCATCTCTTCGGCTGCAAGTTCAGCCTGAAGACAGACACAGGGGACACCATACCTGACAGGAAGAATTTTGACTCCCTGCTGTGGGCCATCGTCACCGTGTTCCAGATCCTAACGCAGGAGGACTGGAACGTGGTTCTGTACAACGGCATGGCCTCTACCTCCTCCTGGGCTGCCCTCTACTTCGTGGCCCTGATGACCTTCGGGAATTATGTTCTCTTCAACCTGCTGGTGGCCATCCTGGTGGAGGGCTTTCAGGCAGAGGGTGACGCCAACAGGTCAGACACAGACGAAGACAAGACATCCACCCGCTTTCAGGAGGATTTTGACAAGCTGAGAGACCTACAAGCCACAGAGATGAAGATGTACTCACTGGCGATGACACCCAACGGGCATCTAGAAGGCCGGGGCAGCCTACCCCCTCCGCTCATCATGCACACGGCTGCCACACCTATGCCCACCCCCCGAAGCTCACCACATTTGGATGCAGCCCACGGCCTCCTGGACTCACGGCGTAGCAGCAGTGGCTCCGTGGACCCCCAGTTGGGGGACCAGAAGTCTCTGGCCAGCCTGCGCAGCTCACCCTGTACCCACTGGGGCCCCAACAGTGCCTGGAGCAGCCGGCGCTCAAGCTGGAACAGCCTTGGCCGTGCACCCAGCCTCAAGCGCCGCAGCCATTGTGGGGAACGTGAGTCACTGCTGTCCGGAGAGGGCAAAGGCAGCACAGATGATGAGGCTGAGGACGGCAGGCCAGGCATGGTGACCTGTCCACTGCAACGTGCTGAATCCCTGGACCACCGCAACACTCTGGACCTGCGACCCCCACAGCTGGCCACCCTCCTGCCTACCAAGCTCCATGACTGCCCTGGGCAGACAGTGGCCCTGCCCAGCGAGTTCTTTCTGCGCATCGACAGCCATAGGGAGGAGGCAGCTGACCTTGAAGATGATGTGGAGGATAGCTGCTGCTTCCGCCTACACAAGGTGCTGGAGCCCTACACGCCCCAGTGGTGCCGAAATCGAGAGTCCTGGGCCCTGTATCTCTTCTCCCCACAGAACAGGCTGCGCACCTTCTGCCAGAAGGTCATTGCACACAAGATGTTTGACCACGTGGTCCTCCTCTTCATCTTCCTCAACTGCATCACCATAGCCCTAGAGCGGCCGGACATCGACCCCAGCAGCACTGAGCGAGCCTTCCTCAGTGTTTCCAACTACATCTTCACAGCCATCTTCGTGGCCGAGATGATGGTGAAGGTGGTGGCCCTGGGCCTGTTGTGGGGAGACTGTGCATACCTGCAGAGCAGCTGGAACGTGCTGGATGGGCTGCTGGTCCTGGTATCCCTAGTTGACATCATAGTGGCCATGGCCTCAGCTGGTGGAGCCAAGATTCTAGGCATCTTGCGCGTGCTGCGCCTGCTTCGGACCCTGCGGCCTCTGAGGGTCATCAGCCGGGCTCCAGGCCTCAAGCTGGTGGTGGAGACTCTGATATCATCTCTCAGGCCCATTGGGAACATCGTCCTCATTTGCTGTGCCTTCTTCATCATCTTTGGCATCCTGGGAGTGCAGCTCTTTAAGGGAAAGTTCTACTTCTGTGAGGGCACCGACACCAGGAATATCTCCACCAAGGCCGAGTGCCGGGCTGCCCACTACCGCTGGGTGCGACGCAAATATAACTTTGACAACCTGGGACAGGCATTGATGTCCCTATTCGTGCTGTCATCCAAGGATGGCTGGGTGAACATCATGTATGACGGGCTAGATGCTGTGGGGATTGACCAGCAGCCTGTGCAGAACCACAACCCCTGGATGCTGCTGTACTTCATCTCCTTCCTGCTCATCGTCAGCTTCTTTGTGCTCAATATGTTTGTGGGTGTCGTGGTTGAGAACTTCCACAAGTGCCGGCAGCACCAGGAGGCTGAAGAGGCACGGAGACGGGAGGAGAAGCGGCTGCGGAGGCTGGAGAGGAAGCGCAGGAAGGCCCAGCGCCGACCCTACTATGCTGACTACTCTCACACACGTCGCTCCATCCATGCACTGTGCACCAGCCACTACCTGGACCTGTTCATCACCTTTATCATCGGCCTCAATGTCATCACCATGTCTGTGGAACACTACAACCAGCCCAAGTCACTGGACGAGGCTCTCAAGTACTGCAACTATGTGTTCACCGTCGTCTTTGTCTTTGAGGCCGCACTAAAGCTGGTGGCCTTTGGGTTCCGGAGATTCTTCAAGGACAGGTGGAACCAGCTGGACCTGGCCATTGTCCTGCTGTCTATCATGGGCATCGCACTAGAGGAGATCGAGATGAACGCTGCACTGCCCATCAACCCCACCATCATCCGTATCATGCGTGTGCTCCGCATTGCCCGCGTGCTGAAGCTGCTCAAGATGGCCACGGGCATGCGGGCCCTGCTGGACACCGTGGTGCAAGCCCTGCCCCAGGTAGGGAACCTTGGTCTTCTTTTCATGCTCCTGTTTTTTATCTATGCTGCCCTGGGAGTGGAGCTGTTCGGGAGGCTTGAGTGCAGCGAGGATAGTCCCTGCGAGGGCCTGAGCCGACACGCCACCTTCTCCAACTTCGGCATGGCCTTCCTCACGCTCTTCCGGGTGTCCACCGGTGACAACTGGAACGGGATCATGAAGGACACACTGCGCGAGTGCGCCCGGGAGGACAAGCACTGCCTCAGCTACCTGCCGGCACTCTCACCCATCTACTTCGTCACCTTTGTGCTGGTGGCCCAGTTTGTGCTGGTCAACGTTGTGGTGGCTGTACTCATGAAGCACCTGGAGGAGAGCAACAAGGAGGCCCGTGAGGATGCCGAGATGGATGCAGAGGCTGAGTTGGAGCTGGCACAGGGGCCCCCAGCACACCCCCTGCCCGGGGTGCAGGACAGCCCAGGCTGTGGGCCAGATGCCCCAAACCTCCTGGTTGTGCGCAAGGTGTCAGTGTCCAGGATGCTGTCGCTGCCCAGTGACAGCTACATGTTCAGGCCCGTGGCACCTGCTGCAGCTCCCCACCCACTGCAGGAAGTGGAGATGCAGACCTACTCAGCTGCCCCCTCAGGCCAAGCCACCTCCGCTCACTCTCCACCCCCGGAGCCCTGTGCCTCCCTCCAGGTCCCACCAGCAACATCTTCCCCAGCCAGGGGCAGTGACCCGCAGTGTGCTTCACCCCCTCGGGGTGCATCCCACTCCCCCAGCCTCGGCCGGCTGCTGTGCAGACAGGAGGCTGTGCATGCTGAGTCACTGGAAGGGCAGGTTGGGGACAGCGGCCCGGATTCCACAGGTCCTGTAGAGAAGACCCCAGTGAGGAAGGCATCCCTGGGGGACTCCCTGCAGTCTCCACCCCGTTCCCCAAGGCCTGCCAGTGTTCGAACCCGCAAACACACTTTTGGACAGCGCTGCATCTCCAGCCGGCTCCTGGCCCCTGGCGGAGATGAGGCTGAAGCCGCGGATCCAGCAGATGAGGAGGTCAGGCACATCACCAGCTCTGTCCACTCATGGCCTGCTGCTGAGGCTCACAACCCCGAGACCTCCCCTGCAGCCCGAGGGGTAGCAGGCAGCGGGCGGGACCTGCACAGGCTCTGCAGTGTGGACGCCCAGGGCTTCCTGGACATGCCAGGTCGGGCAGACACACAAAGGTGGCCCTCAGTGGAGCTGGGTGGTGGTGATGGCCACCTGGAGCCTGGGGAAGTAAAGGCCCGGGTTCCGGAGCTCGAGCCAGCCCTGGGGGCACGCAGAAAGAAGAAGATGAGCCCCCCTTGCATCTCTGTGGACCCCCCTGCAGAGGAAGAGGGCTCTGCACGGCCCCCAGTGGCAGAGGGCAGCAGTACTCTCCGGCGTAGAACCCCATCCTGTGAGGCTGCACCCCACAGGGACTGCCCGGAGCCCAGTGAGAGCACTGGAGGGGACTCTGCTGCCAAGGGGGATCGGTGGGGCCAGGTCCCCTGCCGGGCAGAGCACCTAACAGTCCCCAGCTTTGCCTTCGAGCCACTGAACATGGGCGGCCCTAGTGGGAGCCCCTTCTTGGACAGCAGTCAGAGTGTAACCCCAGAGCCCAGAGTTTCTTTCTCAGGGGCTACGGTGCCTCTGGATCCCCATGAAACAGAGCCTTCTGTGCCCTCTGTGGACCCTTCAGAGAGGGGGCGGGGACTCTACCTCATGGTTCCCCAGACCCCACTGAAGAAATTGGGCTCCCCCACCACCACCCCTGCCCCAAGTGACAGCGCAGATGAGTCCGTGTAG

Related Sequences

XP_004873902.1 Protein

Cacna1h PREDICTED: voltage-dependent T-type calcium channel subunit alpha-1H [Heterocephalus glaber]

Length: 2334 aa      View alignments
>XP_004873902.1
MTEDAPAADEVQVPLGAPLSGPAAGASPSSPGAPGRSAKRGSGSSASPPESPAVERGAELGAGEEQPVPYPALAATVFFCLGQTTRPRSWCLRLVCSPWFEHVSMLVIMLNCVTLGMFRPCEDVACRSERCSILEAFDDFIFAFFAVEMVIKMVALGLFGQKCYLGDTWNRLDFFIVMAGMMEYSLDGHNVSLSAIRTVRVLRPLRAINRVPSMRILVTLLLDTLPMLGNVLLLCFFVFFIFGIVGVQLWAGLLRNRCFLDSAFVRNNNLTFLRPYYQPEEGEENPFICSSRRDNGMQKCSHIPSRRELRVQCTLGWEAYGQPPAEAAGAGRNGCINWNQYYNVCRSGDSNPHNGAISFDNIGYAWIAIFQVITLEGWVDIMYYVMDAHSFYNFIYFILLIIVGSFFMINLCLVVIATQFSETKQRENQLMREQRARYLSNDSTLASFSEPGSCYEELLKYMGHVFRKIKRRSLRLYARWQSRWHKKADPSATLHGQGPGQRQAGRRAASVHHLVYHHHHHHHHHYHFSHGGPRRPNPDPSDTRLVRAGVPLCPPSPGQGPPNSESVHSIYHADCHVEGPQERARLAHAAATATANLKLASGLGTMNYPTILPSSKGSPSPRPKGKRNAGTLGATGHSPLSLGSPDPCEKIQHAVGEHGLGRTPSHLSGLNVPCSLPSPPAGTLTCALKSCPYCASALEDPEFEFSGSESGDSDAHGVYEFTQDVRHGDCRDSVRPSPTVDVPSQGSVRRPQGQAASGEPGGLGRLWASFSSKLRRIVDSKYFNRGIMVAILVNTLSMGVEFHEQPDELTNALEISNIVFTSMFALEMLLKLLACGPLGYIQNPYNIFDGIIVIISVWEIVGQADGGLSVLRTFRLLRVLKLVRFLPALRRQLVVLMKTMDNVATFCMLLMLFIFIFSILGMHLFGCKFSLKTDTGDTIPDRKNFDSLLWAIVTVFQILTQEDWNVVLYNGMASTSSWAALYFVALMTFGNYVLFNLLVAILVEGFQAEGDANRSDTDEDKTSTRFQEDFDKLRDLQATEMKMYSLAMTPNGHLEGRGSLPPPLIMHTAATPMPTPRSSPHLDAAHGLLDSRRSSSGSVDPQLGDQKSLASLRSSPCTHWGPNSAWSSRRSSWNSLGRAPSLKRRSHCGERESLLSGEGKGSTDDEAEDGRPGMVTCPLQRAESLDHRNTLDLRPPQLATLLPTKLHDCPGQTVALPSEFFLRIDSHREEAADLEDDVEDSCCFRLHKVLEPYTPQWCRNRESWALYLFSPQNRLRTFCQKVIAHKMFDHVVLLFIFLNCITIALERPDIDPSSTERAFLSVSNYIFTAIFVAEMMVKVVALGLLWGDCAYLQSSWNVLDGLLVLVSLVDIIVAMASAGGAKILGILRVLRLLRTLRPLRVISRAPGLKLVVETLISSLRPIGNIVLICCAFFIIFGILGVQLFKGKFYFCEGTDTRNISTKAECRAAHYRWVRRKYNFDNLGQALMSLFVLSSKDGWVNIMYDGLDAVGIDQQPVQNHNPWMLLYFISFLLIVSFFVLNMFVGVVVENFHKCRQHQEAEEARRREEKRLRRLERKRRKAQRRPYYADYSHTRRSIHALCTSHYLDLFITFIIGLNVITMSVEHYNQPKSLDEALKYCNYVFTVVFVFEAALKLVAFGFRRFFKDRWNQLDLAIVLLSIMGIALEEIEMNAALPINPTIIRIMRVLRIARVLKLLKMATGMRALLDTVVQALPQVGNLGLLFMLLFFIYAALGVELFGRLECSEDSPCEGLSRHATFSNFGMAFLTLFRVSTGDNWNGIMKDTLRECAREDKHCLSYLPALSPIYFVTFVLVAQFVLVNVVVAVLMKHLEESNKEAREDAEMDAEAELELAQGPPAHPLPGVQDSPGCGPDAPNLLVVRKVSVSRMLSLPSDSYMFRPVAPAAAPHPLQEVEMQTYSAAPSGQATSAHSPPPEPCASLQVPPATSSPARGSDPQCASPPRGASHSPSLGRLLCRQEAVHAESLEGQVGDSGPDSTGPVEKTPVRKASLGDSLQSPPRSPRPASVRTRKHTFGQRCISSRLLAPGGDEAEAADPADEEVRHITSSVHSWPAAEAHNPETSPAARGVAGSGRDLHRLCSVDAQGFLDMPGRADTQRWPSVELGGGDGHLEPGEVKARVPELEPALGARRKKKMSPPCISVDPPAEEEGSARPPVAEGSSTLRRRTPSCEAAPHRDCPEPSESTGGDSAAKGDRWGQVPCRAEHLTVPSFAFEPLNMGGPSGSPFLDSSQSVTPEPRVSFSGATVPLDPHETEPSVPSVDPSERGRGLYLMVPQTPLKKLGSPTTTPAPSDSADESV