Details from NCBI annotation

Gene Symbol Rab40c
Gene Name RAB40C, member RAS oncogene family, transcript variant X1
Entrez Gene ID 101726051

Database interlinks

Part of NW_004624913.1 (Scaffold)

For more information consult the page for NW_004624913.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

RAB40C ENSCPOG00000023164 (Guinea pig)

Gene Details

RAB40C, member RAS oncogene family

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000019362, Guinea pig)

Protein Percentage 100.0%
CDS Percentage 94.96%
Ka/Ks Ratio 0.001 (Ka = 0.0003, Ks = 0.3085)

RAB40C ENSG00000197562 (Human)

Gene Details

RAB40C, member RAS oncogene family

External Links

Gene Match (Ensembl Protein ID: ENSP00000438492, Human)

Protein Percentage 98.93%
CDS Percentage 90.87%
Ka/Ks Ratio 0.0037 (Ka = 0.0043, Ks = 1.1537)

Rab40c ENSMUSG00000025730 (Mouse)

Gene Details

Rab40c, member RAS oncogene family

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000127546, Mouse)

Protein Percentage 99.64%
CDS Percentage 90.51%
Ka/Ks Ratio 0.00187 (Ka = 0.0015, Ks = 0.8011)

Rab40c ENSRNOG00000020067 (Rat)

Gene Details

Rab40c, member RAS oncogene family (Rab40c), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000027266, Rat)

Protein Percentage 99.64%
CDS Percentage 89.92%
Ka/Ks Ratio 0.00175 (Ka = 0.0015, Ks = 0.862)

Genome Location

Sequence Coding sequence

Length: 846 bp    Location: 1403395..1441509   Strand: +
>XM_004873790.1
ATGGGCACCCAGGGAAGCCCAGTGAAGAGCTACGACTATCTGCTCAAGTTCCTGCTGGTCGGCGACAGCGACGTGGGCAAGGGTGAGATCTTGGAAAGCCTTCAGGACGGCGCGGCCGAGTCCCCGTACGCCTACAGCAACGGAATTGACTACAAGACAACTACCATCCTGCTGGACGGCCGACGTGTCAAGCTGGAGCTCTGGGACACGTCGGGCCAGGGCAGGTTCTGTACCATCTTCAGGTCCTACTCCAGGGGTGCACAGGGCATCCTCCTGGTATATGACATTACCAACCGCTGGTCCTTTGATGGCATTGACCGATGGATCAAGGAGATCGATGAGCACGCACCTGGGGTTCCTCGGATCCTGGTTGGGAACCGGCTGCACCTCGCCTTCAAGCGGCAAGTGCCAACAGAGCAGGCTCGTGCCTATGCAGAGAAGAACTGCATGACCTTCTTTGAGGTCAGCCCCCTGTGCAACTTCAACGTCATCGAGTCCTTCACGGAGCTCTCTCGCATCGTGCTCATGCGGCACGGGATGGAGAAGATCTGGAGGCCCAATCGAGTGTTCAGCTTGCAGGATCTCTGCTGCCGTGCCATCGTCTCCTGCACCCCTGTGCATCTCATCGACAAGCTTCCACTGCCTGTCACTATCAAGAGCCACCTCAAGTCCTTCTCGATGGCAAACGGCATGAATGCTGTCATGATGCATGGCCGTTCCTACTCTCTGGCCAGCGGGGCTGGGGGCAGCAGCAGCAAAGGCAACAGCCTTAAGCGTTCCAAGTCTATCCGTCCCCCTCAGAGCCCTCCCCAGAACTGCTCTCGAAGCAACTGCAAGATCTCCTAG

Related Sequences

XP_004873847.1 Protein

Rab40c PREDICTED: ras-related protein Rab-40C isoform X1 [Heterocephalus glaber]

Length: 281 aa      View alignments
>XP_004873847.1
MGTQGSPVKSYDYLLKFLLVGDSDVGKGEILESLQDGAAESPYAYSNGIDYKTTTILLDGRRVKLELWDTSGQGRFCTIFRSYSRGAQGILLVYDITNRWSFDGIDRWIKEIDEHAPGVPRILVGNRLHLAFKRQVPTEQARAYAEKNCMTFFEVSPLCNFNVIESFTELSRIVLMRHGMEKIWRPNRVFSLQDLCCRAIVSCTPVHLIDKLPLPVTIKSHLKSFSMANGMNAVMMHGRSYSLASGAGGSSSKGNSLKRSKSIRPPQSPPQNCSRSNCKIS