Sequence details NCBI ID: XM_004873647.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Tsc2
Gene Name tuberous sclerosis 2, transcript variant X6
Entrez Gene ID 101713968

Database interlinks

Part of NW_004624913.1 (Scaffold)

For more information consult the page for NW_004624913.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

TSC2 ENSCPOG00000003217 (Guinea pig)

Gene Details

tuberous sclerosis 2

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000002913, Guinea pig)

Protein Percentage 95.8%
CDS Percentage 93.19%
Ka/Ks Ratio 0.09305 (Ka = 0.0211, Ks = 0.2267)

TSC2 ENSG00000103197 (Human)

Gene Details

tuberous sclerosis 2

External Links

Gene Match (Ensembl Protein ID: ENSP00000219476, Human)

Protein Percentage 91.87%
CDS Percentage 86.79%
Ka/Ks Ratio 0.06165 (Ka = 0.0417, Ks = 0.6766)

Tsc2 ENSMUSG00000002496 (Mouse)

Gene Details

tuberous sclerosis 2

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000094986, Mouse)

Protein Percentage 92.25%
CDS Percentage 86.78%
Ka/Ks Ratio 0.0717 (Ka = 0.041, Ks = 0.5716)

Tsc2 ENSRNOG00000011375 (Rat)

Gene Details

tuberous sclerosis 2 (Tsc2), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000016221, Rat)

Protein Percentage 92.5%
CDS Percentage 86.84%
Ka/Ks Ratio 0.06848 (Ka = 0.0391, Ks = 0.571)

Genome Location

Sequence Coding sequence

Length: 5442 bp    Location: 202420..166931   Strand: -
Raw sequence   
>XM_004873647.1
ATGTTTTCAGTGCCTATTTCTTCTGCACAGAGGAACTCTCCTGGGCCCCTGGCCACCATGGCCAAGCCAGCAAACAAAGATTCAGGCTTGAAGGAGAAGTTCAAGATTCTATTGGGACTGGGAACACCAAGGCCAAATCCTAGGCCTCCAGAAGGCAAACAGACCGAGTTTATCATCACAGCGGAAATCCTGAGAGAACTGAGTGTTGAATGTGGCCTCAACAATCGCATCCGGATGATAGGGCAGATCTGTGAAGTTGCAAAAACTAAGAAATTTGAAGAGCATGCAGTGGAAGCACTCTGGAAGGCTGTCGCAGACCTGTTGCAGCCAGAGCGGCCACCAGAGGCCCGACATGCAGTGTTGGCTCTGCTGAAGGCTATTGTGCAGGGGCAGGGTGATCGCTTGGGAGTTCTCAGAGCCCTCTTCTTTAAGGTCATCAAAGATTACCCCTCCAATGAAGACCTCCATGAAAGGCTGGAAGTTTTCAAGGCCCTCACAGACAATGGGAGACACATCACCTACTTGGAAGAAGAACTGGCGGACTTTGTCTTGCAGTGGATGGATATTGGCTTGTCCTCAGAATTCCTGCTGGTGCTTGTGAACTTGGTCAAGTTCAACAGCTGTTACCTTGACGAACACATCGCATCAATGGTTCACATGATCTGTCTGCTGTGCATCCGAACCATGTCCTCTGTGGACATAGAGGTCTCCTTGCAGGTGCTGGATGCTGTGGTCTGCTACAACTGCCTGCCAGCTGAGAGCCTCCCTCTGTTCATTGTCACCCTGTGCCGTACCATCAATGTCAAGGAACTCTGTGAGCCTTGCTGGAAGCTGATGCGTAACCTCCTGGGCACTCACCTGGGCCACAGTGCCATCTATAACATGTGCCGCATCATGGAGGACAGAGCCTACATGGAAGATGCTCCACTGCTGAGAGGAGCTGTGTTCTTTGTGGGCATGGCTCTTTGGGGAGCCCACCGACTCTATTCTCTCAAGAACTCCCCAACATCTGTATTGCCATCTTTTTATGAGGCCATGACCTGTCCCAATGAAGTGGTGTCCTATGAGATTGTGCTGTCCATAACCAGACTCATTAAGAAGTATAGGAAGGAGCTTCAGGCGGTGACATGGGACATTCTGCTGAATATCATGGAACGGCTGCTTCAGCAGCTCCAGGACCTGGACAGCTCAGAGCTCAGGACCATCGTGCATGACCTGCTGACCACTGTGGAGGAGCTGTGTGACCAGAATGAGTTTCACGGCTCGAAGGAAAGATACTTTGAGCTGGTGGAGAGCTGTGCAGACCAGAGGCCTGAATCCTCGCTCTTAAACTTAATATCCTATAGAGCTCAGTCTATTCACCCAGCGAAGGACGGCTGGATCCAGAACCTGCACTTGCTGATGGAGAGGTTCTTCAGGAATGAGGCTCGTAGTGCTGTGCGCATCAAGGTGTTGGATGTGCTATCCTTCGTGCTGCTCATCAACAGGCAGTTCTATGAGGAAGAACTGATTAACTCAGTGGTCATCTCTCAGCTCTCCCATATCCCTGAAGACAGAGACCCTCAAGTCCGAAAGCTGGCCACCCAACTGCTGGTGGACCTGGCAGAAGGCTGCCATACCCACCACTTCAACAGTCTGCTAGACATCATTGAAAAAGTGATGGCCCGCTCCCTCTCTCTGCCTCCCGAGCTGGAAGAAAGGGATGTGACTGCCTACTCAGCTTCTCTGGAGGATGTGAAAACTGCAGTCCTAGGACTCCTGGTCATCCTTCAGACCAAGCTATACACCCTGCCTGCCAGCCATGCCATGCGTGTGTATGAGACGCTTATCAGCCACATCCAGCTCCACTATAAGCATAACTACTCCCTGCCCATTGCCAGCAGCATCCGGCTACAGGCCTTTGACTTCCTGCTGCTGCTACGGGCTGATGCGCTGCACCGCCTGGGTCTGCCCACCAAGGATGGGATCGTGAGATTTAGCCCCTACTGCCTGTGTGACTGCATGGAGCCTGAGAGGGCCTCTGAAAAGAAGGCTGGTGGCCCCCTTTCACCTCCCACTGGGCCATCAGGCTCTGCATCAGCAGGTCCTGCCTTTCGGCTTGGTCACCTGCCCTACTCTCTGCTCTTCCGAGTTCTGCTGCAGTGTTTGAAACAGGAAACTGACTGGAAGGTGCTGAAGTTGGTCCTTAGTAAGCTGCCAGAGTCACTGCGCTACAAAGTTCTCATCTTCACATCTCCATGCAACGTTGACCAGCTCTCTTCTGCCCTCTGCTCTATGCTTTCAGGCCCAAAGACCCTTGAGCGCCTCCGAGGCACCCCAGAAGGCTTCTCCAGAACTGACCTGCACTTGGCTGTGGTTCCTGTTCTGACCGTGTTGATCTCTTACCATAACTACTTGGACAAGACCAAACAGCGTGAGATGGTTTACTGCCTGGAGCAAGGCCTCATCTACCGCTGTGCCAGTCAGTGCGTGGTGGCCCTGGCCATCTGCAGTGTGGAGATGCCTGACATCATGATCAAGGCGCTGCCCGTCCTGGTGGTGAAGCTCACGCACATCTCTGCCACAGCCAGCATGGCTGTCCCTCTCCTAGAATTTCTGTCCACTCTGGCCAGACTGCCCCACCTCTACAGGAATTTTGCCGCTGAACAGTATGCGAGTGTGTTTGCTATCTCCTTGCCGTATACCAACCCCTCCAAGTTCAATCAGTACATCGTGTGCCTGGCACATCACGTCATAGCCATGTGGTTCATTAGGTGCCGCCTGCCCTTCCGGAAAGATTTTGTCCCGTTTATCACTAAGGGTCTACGTTCCAATGTCCTCCTGTCTTTTGATGACACCCCTGAGAAGGACAGCTTCAGAGCACGGAGCACCAGCCTCAATGAGAGGCCCAAAAGTTTGAGGATAGCCAGAGCCCCCAAACAAGGCCTGAATAACTCCCCACCCGTGAAAGAATTCAAGGAGAGCTCTGCAGCCGAGGCCTTCCGGTGCCGCAGCATCAGTGTGTCTGAACATGTGGTCCGCAGCAGAATACAGACATCCCTCACCACTGCCAGCCTTGGGTCTGCAGATGAGAACTCCATGGCCCAGGCTGATGACAACTTGAAAAATCTCCACCTGGAGCTCACAGAAACATGTCTGGACATGATGGCCCGATATGTATTCTCCAACTTCACTGCAGTCCCCAAGAGGTCTCCTGTAGGAGAATTCCTCCTGGCAGGTGGCAGGACCAAAACCTGGCTGGTTGGGAATAAACTTGTCACCGTGACAACAAGTGTCGGGGCCGGGACCCGGTCATTGCTGGGCTTGGACTCAGGCGAGCTACAGGGTGGCCCAGAGTCAAGCTCTGATCCTGGTGTACACGTGAGACAGACCAAGGAGGCGCCTGCAAAGCTGGAGTCCCAGGCTGGGCAACAGGTGTCCTGTGGGGCCCGTGACCGTGTCCGCTCCATGTCTGGGGGCCATGGCCTTCGGGTTAGTGCCCTGGATGCACCAGCCCCCCACACTACAAGTGGCCCTGCCTCTCCGGGACTGCAGACCATACCAGCCGCAAAGCCTGAGCAGACTTCTGCAGGTGCCCGGGTTTTAGCACCAGAGAAGACGAACCTGGCAGCCTATGTGCCGCTGCTGACCCAGGGCTGGGCAGAGATCTTGGTCCGGAGGCCCACAGGGAACACCAGCTGGCTGATGAGCCTGGAGAACCCACTCAGCCCCTTCTCCTCGGACATTAACAACATGCCCCTGCAGGAGCTGTCCAACGCCCTCATGGCTGCCGAGCGCTTCAAAGAGCACCGGGACACTGCCTTGTACAAGTCACTCTCAGTGCCAGCAGCTGGCACAGCCAAGCCCCCTCCTCTCCCACGGTCTAATACAGACTCCGCTGTGGTTCTGGAGGAAGGAAGTCCAGGCGAGGCTCACATGCCAGGGGAGCCCCCAGAGTTGGAGGACTTCGAACCAGCGCTAGGTACAGACAGGCGCTGCCAGCGCCCTGACACGTACAGCAGGTCATCCTCAGCCTCTAGCCAGGAAGAGAAGTCATCCCATGTGGAGGAGCTGGCTGTGGGGGCTATACCCATCGAGCGGGTTGTCTCTTCCGAGGGTGGCCGGCCCTTGGTGGACCTCTCTTTCCAGCCATCACAGCCCCTGAGCAAGTCCAGCTCCTCTCCTGAGCTGCAGACCCTGCAGGACATCCTTGGAGACCCTGGGGACAAGGCTGACGTTGGCCAGTTGAGTCCTGAGGCCAAGGCCCGATCCCAGTCAGGGATACTGGATGGGGAAGGTGCCGCCTGGTCAGCTGCAGGTGAAGAGAGCCAGGGTCCAGCTCCACCCGAGGGTCCCTTGCCATCCAGCTCTCCCCACTCTCCCAGTGGCCTCCGCCCCCGAGGCTACACCATCTCGGACTCTGCCCCGTCACGCAGGGGCAAACGGGTGGAGAGGGATGCCTTCAAAAACAGAGCTGCCACCTCCAACACTGAGAAAGTGCCAGGCATCAACCCCAGCTTTGTGTTCCTGCAGCTCTACCATTCACCTTTCTTTGGGGATGAGTCCAACAAACCCATCCTATTGCCCAATGAGACAGGCTCTGTGTGGCTACAGTCCTTCGAACGGTCAGTGCAGCTGCTTGACCAGATCCCGTCCTACGACACTCACAAGATTGCTGTCCTGTACGTGGGAGAAGGCCAGAGCAGCAGCGAGCTGGCCATCCTCTCCAATGAGCATGGCTCCTACAGGTACACGGAGTTCCTGACGGGCCTGGGCAGGCTCATTGAGCTCAAGGACTGCCAGCCTGATAAGGTGTACCTGGGTGGCCTTGATGTATGTGGTGAGGACGGCCAGTTCACCTACTGCTGGCATGACGACATCATGCAAGCTGTCTTTCACATTGCCACCCTGATGCCTACCAAGGATGTGGACAAACACCGCTGTGATAAGAAGCGGCACCTGGGTAACGACTTTGTTTCCATCATCTACAATGACTCTGGCGAGGAATTCAAGCTGGGTACCATCAAGGGCCAATTCAACTTCGTCCACGTGATCATCACGCCCCTGGACTACGAGTGCAACTTGCTGTCATTGCAGTGCAGGAAAGACATGGAGGGTCTGGTGGATACCAGCGTGGCCAAGATTGTGTCTGACCACAACCTGCCCTTTGTGGCCCGCCAGATGGCCCTGCATGCAAATATGGCCTCGCAGGTGCACCACAGCCGTTCTAACCCCACGGACATCTACCCCTCCAAGTGGATTGCTCGGCTCCGCCACATCAAGCGGCTCCGCCACCGGATCCGTGAGGAAGCCCAGTACTCAAACCCCAGCCTCCCTCTGATGCACCCCCCAGCCCATGCCAAAGCCTCAGCCCAGGCCCCATCTGAACCCACACCTGCTTATGAGACAGGCCAGCGGAAACGCCTCATCTCCTCGGTGGATGACTTCACAGAGTTTGTGTGA

Related Sequences

XP_004873704.1 Protein

Tsc2 PREDICTED: tuberin isoform X6 [Heterocephalus glaber]

Length: 1813 aa      View alignments
>XP_004873704.1
MFSVPISSAQRNSPGPLATMAKPANKDSGLKEKFKILLGLGTPRPNPRPPEGKQTEFIITAEILRELSVECGLNNRIRMIGQICEVAKTKKFEEHAVEALWKAVADLLQPERPPEARHAVLALLKAIVQGQGDRLGVLRALFFKVIKDYPSNEDLHERLEVFKALTDNGRHITYLEEELADFVLQWMDIGLSSEFLLVLVNLVKFNSCYLDEHIASMVHMICLLCIRTMSSVDIEVSLQVLDAVVCYNCLPAESLPLFIVTLCRTINVKELCEPCWKLMRNLLGTHLGHSAIYNMCRIMEDRAYMEDAPLLRGAVFFVGMALWGAHRLYSLKNSPTSVLPSFYEAMTCPNEVVSYEIVLSITRLIKKYRKELQAVTWDILLNIMERLLQQLQDLDSSELRTIVHDLLTTVEELCDQNEFHGSKERYFELVESCADQRPESSLLNLISYRAQSIHPAKDGWIQNLHLLMERFFRNEARSAVRIKVLDVLSFVLLINRQFYEEELINSVVISQLSHIPEDRDPQVRKLATQLLVDLAEGCHTHHFNSLLDIIEKVMARSLSLPPELEERDVTAYSASLEDVKTAVLGLLVILQTKLYTLPASHAMRVYETLISHIQLHYKHNYSLPIASSIRLQAFDFLLLLRADALHRLGLPTKDGIVRFSPYCLCDCMEPERASEKKAGGPLSPPTGPSGSASAGPAFRLGHLPYSLLFRVLLQCLKQETDWKVLKLVLSKLPESLRYKVLIFTSPCNVDQLSSALCSMLSGPKTLERLRGTPEGFSRTDLHLAVVPVLTVLISYHNYLDKTKQREMVYCLEQGLIYRCASQCVVALAICSVEMPDIMIKALPVLVVKLTHISATASMAVPLLEFLSTLARLPHLYRNFAAEQYASVFAISLPYTNPSKFNQYIVCLAHHVIAMWFIRCRLPFRKDFVPFITKGLRSNVLLSFDDTPEKDSFRARSTSLNERPKSLRIARAPKQGLNNSPPVKEFKESSAAEAFRCRSISVSEHVVRSRIQTSLTTASLGSADENSMAQADDNLKNLHLELTETCLDMMARYVFSNFTAVPKRSPVGEFLLAGGRTKTWLVGNKLVTVTTSVGAGTRSLLGLDSGELQGGPESSSDPGVHVRQTKEAPAKLESQAGQQVSCGARDRVRSMSGGHGLRVSALDAPAPHTTSGPASPGLQTIPAAKPEQTSAGARVLAPEKTNLAAYVPLLTQGWAEILVRRPTGNTSWLMSLENPLSPFSSDINNMPLQELSNALMAAERFKEHRDTALYKSLSVPAAGTAKPPPLPRSNTDSAVVLEEGSPGEAHMPGEPPELEDFEPALGTDRRCQRPDTYSRSSSASSQEEKSSHVEELAVGAIPIERVVSSEGGRPLVDLSFQPSQPLSKSSSSPELQTLQDILGDPGDKADVGQLSPEAKARSQSGILDGEGAAWSAAGEESQGPAPPEGPLPSSSPHSPSGLRPRGYTISDSAPSRRGKRVERDAFKNRAATSNTEKVPGINPSFVFLQLYHSPFFGDESNKPILLPNETGSVWLQSFERSVQLLDQIPSYDTHKIAVLYVGEGQSSSELAILSNEHGSYRYTEFLTGLGRLIELKDCQPDKVYLGGLDVCGEDGQFTYCWHDDIMQAVFHIATLMPTKDVDKHRCDKKRHLGNDFVSIIYNDSGEEFKLGTIKGQFNFVHVIITPLDYECNLLSLQCRKDMEGLVDTSVAKIVSDHNLPFVARQMALHANMASQVHHSRSNPTDIYPSKWIARLRHIKRLRHRIREEAQYSNPSLPLMHPPAHAKASAQAPSEPTPAYETGQRKRLISSVDDFTEFV