Details from NCBI annotation

Gene Symbol Smc1a
Gene Name structural maintenance of chromosomes 1A
Entrez Gene ID 101713253

Database interlinks

Part of NW_004624909.1 (Scaffold)

For more information consult the page for NW_004624909.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

SMC1A ENSCPOG00000009577 (Guinea pig)

Gene Details

structural maintenance of chromosomes 1A

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000008594, Guinea pig)

Protein Percentage 95.29%
CDS Percentage 91.96%
Ka/Ks Ratio 0.09514 (Ka = 0.032, Ks = 0.3367)

SMC1A ENSG00000072501 (Human)

Gene Details

structural maintenance of chromosomes 1A

External Links

Gene Match (Ensembl Protein ID: ENSP00000323421, Human)

Protein Percentage 99.76%
CDS Percentage 93.67%
Ka/Ks Ratio 0.00328 (Ka = 0.0011, Ks = 0.3319)

Smc1a ENSMUSG00000041133 (Mouse)

Gene Details

structural maintenance of chromosomes 1A

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000044645, Mouse)

Protein Percentage 99.76%
CDS Percentage 91.43%
Ka/Ks Ratio 0.002 (Ka = 0.0011, Ks = 0.5329)

Smc1a ENSRNOG00000003139 (Rat)

Gene Details

structural maintenance of chromosomes 1A

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000004364, Rat)

Protein Percentage 94.62%
CDS Percentage 87.99%
Ka/Ks Ratio 0.05069 (Ka = 0.0348, Ks = 0.6873)

Genome Location

Sequence Coding sequence

Length: 3702 bp    Location: 668497..630062   Strand: -
>XM_004873513.1
ATGGGTTTCCTGAAATTGATTGAGATCGAGAACTTTAAATCATACAAGGGTCGACAGATTATCGGACCGTTTCAGAGGTTCACCGCCATCATTGGACCCAATGGCTCTGGTAAGTCAAATCTCATGGACGCTATCAGCTTTGTGCTAGGTGAAAAAACCAGCAACCTGCGGGTAAAGACGCTTCGGGACCTAATCCATGGAGCGCCTGTGGGCAAGCCAGCTGCTAATCGGGCCTTTGTCAGCATGGTCTACTCCGAAGAGGGTGCTGAAGACCGCACCTTTGCGCGTGTCATTGTAGGTGGTTCCTCTGAGTACAAGATCAACAACAAAGTGGTCCAGCTACATGAGTACAGTGAGGAATTAGAGAAGTTGGGCATTCTCATCAAAGCCCGTAACTTCCTTGTCTTCCAGGGTGCTGTGGAATCTATTGCCATGAAGAACCCCAAAGAGAGGACAGCTCTGTTTGAAGAGATCAGTCGCTCTGGGGAGCTGGCGCAGGAATATGATAAGCGAAAGAAGGAAATGGTGAAGGCTGAAGAGGACACTCAATTTAATTATCATCGTAAGAAAAACATAGCAGCTGAACGCAAGGAGGCCAAACAAGAGAAAGAAGAGGCAGACCGCTACCAGCGCCTGAAGGACGAGGTGGTGCGAGCTCAGGTACAGCTGCAGCTCTTTAAGCTTTACCACAATGAAGTAGAAATTGAGAAACTCAACAAGGAACTAGCCTCGAAGAACAAGGAGATTGAGAAGGACAAGAAGCGTATGGACAAGGTTGAGGATGAGCTAAAGGAGAAGAAGAAGGAGCTGGGCAAAATGATGCGGGAGCAGCAGCAGATTGAGAAGGAGATCAAGGAGAAGGACTCAGAGCTGAATCAGAAGCGGCCTCAGTACATCAAAGCCAAAGAGAATACTTCCCACAAAATCAAGAAATTGGAAGCAGCCAAGAAGTCCCTGCAGAATGCTCAGAAACACTACAAGAAACGTAAAGGTGACATGGATGAGCTGGAGAAGGAAATGCTGTCAGTGGAGAAGGCCCGGCAGGAGTTCGAGGAACGAATGGAAGAGGAGAGTCAGAGTCAGGGCAGAGACTTGACTTTGGAGGAGAATCAGGTGAAGAAATACCATCGGTTAAAAGAAGAAGCCAGCAAGAGAGCAGCTACTTTGGCCCAGGAGCTAGAGAAGTTCAATAGAGACCAGAAAGCTGATCAGGACCGCCTGGATCTAGAAGAGCGGAAGAAAGTAGAGACAGAGGCCAAGATCAAGCAAAAGCTGCGGGAGATTGAAGAGAATCAGAAGCGGATTGAGAAGCTGGAGGAATACATCACCACTAGCAAGCAGTCCCTAGAGGAACAAAAAAAGCTAGAGGGAGAGCTGACAGAGGAGGTGGAGATGGCCAAGCGGCGGATCGATGAGATCAATAAGGAGCTGAACCAGGTGATGGAGCAGTTGGGGGATGCCCGCATTGACCGCCAGGAGAGCAGCCGCCAGCAGCGAAAGGCAGAGATAATGGAAAGCATCAAGCGTCTTTACCCTGGCTCTGTGTATGGCCGCCTTATTGACCTCTGCCAGCCCACACAAAAGAAGTATCAGATTGCTGTGACCAAGGTTTTGGGCAAGAACATGGATGCTATTATTGTAGACTCAGAGAAGACAGGCCGGGATTGTATTCAGTATATCAAGGAGCAACGTGGGGAGCCTGAGACCTTCTTGCCTCTTGACTACCTGGAGGTGAAACCTACAGATGAGAAACTCCGGGAGCTGAAGGGGGCCAAGCTAGTGATTGATGTGATTCGCTATGAGCCACCTCACATTAAAAAAGCTCTGCAGTATGCTTGTGGCAATGCCCTTGTCTGTGACAATGTAGAGGATGCCCGCCGTATTGCCTTTGGAGGCCATCAGCGTCACAAGACAGTGGCATTAGATGGGACCCTGTTCCAGAAGTCAGGAGTCATCTCTGGTGGGGCCAGTGACTTGAAGGCCAAAGCTCGGCGCTGGGATGAAAAAGCAGTAGACAAGTTGAAAGAGAAAAAGGAGCGGTTGACAGAGGAACTAAAAGAACAGGTGAAGGCAAAACGCAAAGAGGCCGAACTGCGTCAGGTGCAGTCTCAGGCCCATGGACTGCAGATGCGGCTCAAGTACTCACAGAGTGACCTAGAACAGACCAAGACACGGCATTTGGCACTGAATCTCCAGGAAAAATCCAAGCTGGAGAGTGAACTGGCCAACTTTGGACCTCGAATTAATGATATCAAGCGGATCATCCAGAGCCGAGAGAGGGAAATGAAGGACTTAAAGGAGAAGATGAATCAGGTGGAGGATGAGGTATTTGAAGAGTTCTGTCGGGAGATTGGTGTACGCAATATCCGAGAATTTGAGGAGGAAAAGGTGAAACGGCAGAATGAAATTGCCAAGAAGCGTTTGGAGTTTGAGAATCAGAAGACTCGCTTGGGGATCCAGTTGGATTTTGAAAAGAACCAACTGAAGGAGGACCAGGATAAAGTACACATGTGGGAGCAGACAGTGAAAAAAGATGAAAATGAGATAGAAAAGCTCAAGAAGGAGGAACAAAGACACATGAAGATCATAGATGAGACCATGGCTCAGCTACAAGACCTGAAGAATCAGCACTTGGCCAAGAAGTCAGAAGTAAATGACAAGAATCATGAGATGGAGGAGATTCGTAAGAAACTGGGAGGTGCTAACAAGGAAATGACTCATTTACAGAAGGAGGTGACAGCCATTGAAACCAAGCTTGAACAGAAGCGCAGTGACCGCCACAACTTGCTACAGGCATGCAAGATGCAGGATATCAAGTTGCCACTCTCAAAGGGTACCATGGATGATATTAGTCAGGAAGAGGGTAGTTCTCAGGGAGAAGATTCAGTGAGTGGTTCCCAGAGAACTTCCAATATCTATGCACGAGAGGCCCTCATCGAGATTGACTATGGTGACCTTTGTGAGGATCTCAAGGATGCCCAGGCTGAGGAAGAGATCAAACAGGAGATGAACACACTGCAGCAGAAGCTAAATGAGCAGCAAAGTGTGCTTCAGCGTATTGCTGCCCCCAACATGAAGGCCATGGAAAAGTTGGAAAGTGTCAGAGACAAGTTCCAGGAAACCTCAGATGAGTTTGAGGCAGCCCGAAAGCGAGCAAAGAAGGCCAAGCAGGCATTTGAACAGATTAAGAAGGAGCGCTTTGATCGTTTCAATGCTTGTTTTGAATCTGTGGCTACCAACATTGATGAAATCTATAAGGCTCTGTCCCGCAACAGCAGTGCCCAGGCATTCTTGGGTCCTGAGAACCCTGAGGAACCCTACTTAGATGGCATCAACTACAACTGTGTGGCTCCTGGCAAACGCTTCCGGCCTATGGATAACTTGTCAGGGGGAGAGAAGACAGTAGCAGCTCTGGCCCTCCTCTTTGCCATTCATAGCTACAAGCCAGCCCCCTTCTTTGTCCTGGATGAGATCGATGCTGCCTTGGATAACACCAACATTGGCAAGGTGGCGAATTATATCAAGGAGCAGTCGACTTGCAACTTCCAGGCCATCGTCATCTCTCTCAAGGAGGAGTTCTACACCAAGGCTGAGAGCCTCATTGGAGTCTATCCTGAGCAAGGGGACTGTGTGATCAGCAAAGTCCTGACCTTCGACCTTACCAAGTACCCAGATGCCAACCCAAACCCCAATGAACAGTAG

Related Sequences

XP_004873570.1 Protein

Smc1a PREDICTED: structural maintenance of chromosomes protein 1A [Heterocephalus glaber]

Length: 1233 aa      View alignments
>XP_004873570.1
MGFLKLIEIENFKSYKGRQIIGPFQRFTAIIGPNGSGKSNLMDAISFVLGEKTSNLRVKTLRDLIHGAPVGKPAANRAFVSMVYSEEGAEDRTFARVIVGGSSEYKINNKVVQLHEYSEELEKLGILIKARNFLVFQGAVESIAMKNPKERTALFEEISRSGELAQEYDKRKKEMVKAEEDTQFNYHRKKNIAAERKEAKQEKEEADRYQRLKDEVVRAQVQLQLFKLYHNEVEIEKLNKELASKNKEIEKDKKRMDKVEDELKEKKKELGKMMREQQQIEKEIKEKDSELNQKRPQYIKAKENTSHKIKKLEAAKKSLQNAQKHYKKRKGDMDELEKEMLSVEKARQEFEERMEEESQSQGRDLTLEENQVKKYHRLKEEASKRAATLAQELEKFNRDQKADQDRLDLEERKKVETEAKIKQKLREIEENQKRIEKLEEYITTSKQSLEEQKKLEGELTEEVEMAKRRIDEINKELNQVMEQLGDARIDRQESSRQQRKAEIMESIKRLYPGSVYGRLIDLCQPTQKKYQIAVTKVLGKNMDAIIVDSEKTGRDCIQYIKEQRGEPETFLPLDYLEVKPTDEKLRELKGAKLVIDVIRYEPPHIKKALQYACGNALVCDNVEDARRIAFGGHQRHKTVALDGTLFQKSGVISGGASDLKAKARRWDEKAVDKLKEKKERLTEELKEQVKAKRKEAELRQVQSQAHGLQMRLKYSQSDLEQTKTRHLALNLQEKSKLESELANFGPRINDIKRIIQSREREMKDLKEKMNQVEDEVFEEFCREIGVRNIREFEEEKVKRQNEIAKKRLEFENQKTRLGIQLDFEKNQLKEDQDKVHMWEQTVKKDENEIEKLKKEEQRHMKIIDETMAQLQDLKNQHLAKKSEVNDKNHEMEEIRKKLGGANKEMTHLQKEVTAIETKLEQKRSDRHNLLQACKMQDIKLPLSKGTMDDISQEEGSSQGEDSVSGSQRTSNIYAREALIEIDYGDLCEDLKDAQAEEEIKQEMNTLQQKLNEQQSVLQRIAAPNMKAMEKLESVRDKFQETSDEFEAARKRAKKAKQAFEQIKKERFDRFNACFESVATNIDEIYKALSRNSSAQAFLGPENPEEPYLDGINYNCVAPGKRFRPMDNLSGGEKTVAALALLFAIHSYKPAPFFVLDEIDAALDNTNIGKVANYIKEQSTCNFQAIVISLKEEFYTKAESLIGVYPEQGDCVISKVLTFDLTKYPDANPNPNEQ