Sequence details NCBI ID: XM_004873510.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Hsd17b10
Gene Name hydroxysteroid (17-beta) dehydrogenase 10, transcript variant X1
Entrez Gene ID 101712281

Database interlinks

Part of NW_004624909.1 (Scaffold)

For more information consult the page for NW_004624909.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

HSD17B10 ENSCPOG00000009594 (Guinea pig)

Gene Details

hydroxysteroid (17-beta) dehydrogenase 10

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000008611, Guinea pig)

Protein Percentage 91.57%
CDS Percentage 93.23%
Ka/Ks Ratio 0.32811 (Ka = 0.0455, Ks = 0.1387)

HSD17B10 ENSG00000072506 (Human)

Gene Details

hydroxysteroid (17-beta) dehydrogenase 10

External Links

Gene Match (Ensembl Protein ID: ENSP00000168216, Human)

Protein Percentage 88.89%
CDS Percentage 87.36%
Ka/Ks Ratio 0.16 (Ka = 0.0626, Ks = 0.3913)

Hsd17b10 ENSMUSG00000025260 (Mouse)

Gene Details

hydroxysteroid (17-beta) dehydrogenase 10

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000026289, Mouse)

Protein Percentage 85.44%
CDS Percentage 85.82%
Ka/Ks Ratio 0.2242 (Ka = 0.0849, Ks = 0.3787)

Hsd17b10 ENSRNOG00000003049 (Rat)

Gene Details

hydroxysteroid (17-beta) dehydrogenase 10 (Hsd17b10), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000043608, Rat)

Protein Percentage 84.67%
CDS Percentage 86.59%
Ka/Ks Ratio 0.28935 (Ka = 0.0919, Ks = 0.3175)

Genome Location

Sequence Coding sequence

Length: 786 bp    Location: 684025..681731   Strand: -
Raw sequence   
>XM_004873510.1
ATGGCTGTGGCGTGTCGGAGCGTGAAGGGCCTTGTTGCAGTAATTACCGGAGGAGCCTCAGGCCTTGGCCTGGGCACAGCTAAGCGACTGGTGGAGCAAGGAGCCATTGCTGTGCTTCTGGACTTGCCCAACTCTGATGGAGAAGCCCAGGCCAAGAAGTTAGGAAAGAGCTGTGTGTTTGCCCCAGTTGATGTGACCTCTGAGAAGGACGTGCAGACAGCCTTGACTCTGGCAAAGGAGAATTTTGGCCATGTGGATGTGGCTGTCAACTGTGCAGGTATTGCAGTGGCCAATAAGACATACAACTTAAAGAAGCAGCAGCCCCACAGCTTGGAGGATTTCCAGCGAATTCTCAATGTGAATCTCTTAGGCACCTTCAATGTGATCCGCCTGGTTGCTGGTGAGATGAGCCGGAATGAACCAGACCAGGGAGGCCAACGTGGGGTTATTATCAACACTGCCAGTGTGGCTGCCTTTGAGGGCCAGGTTGGACAAGCTGCATACTCTGCATCCAAGGGAGGCATAGTGAGCATGACATTGCCCATTGCTCGAGATCTGGCTCCCATGGGCATCCGGGTGATGACCATTGCTCCAGGCCTGTTTGACACCCCACTGCTGACCAGCCTCCCAGAAAAGGTACGCAACTTCTTGGCCAGCCAGGTACCCTTCCCCACCCGAATTGGAGACCCTGCTGAGTATGCTCATCTGGTACAGACCATAATCGAGAACCCATTCCTCAATGGAGAGGTCATCCGGCTGGATGGGGCCATCCGCATGCAGCCTTGA

Related Sequences

XP_004873567.1 Protein

Hsd17b10 PREDICTED: 3-hydroxyacyl-CoA dehydrogenase type-2 isoform X1 [Heterocephalus glaber]

Length: 261 aa      View alignments
>XP_004873567.1
MAVACRSVKGLVAVITGGASGLGLGTAKRLVEQGAIAVLLDLPNSDGEAQAKKLGKSCVFAPVDVTSEKDVQTALTLAKENFGHVDVAVNCAGIAVANKTYNLKKQQPHSLEDFQRILNVNLLGTFNVIRLVAGEMSRNEPDQGGQRGVIINTASVAAFEGQVGQAAYSASKGGIVSMTLPIARDLAPMGIRVMTIAPGLFDTPLLTSLPEKVRNFLASQVPFPTRIGDPAEYAHLVQTIIENPFLNGEVIRLDGAIRMQP