Sequence details NCBI ID: XM_004873473.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Ocel1
Gene Name occludin/ELL domain containing 1
Entrez Gene ID 101699126

Database interlinks

Part of NW_004624908.1 (Scaffold)

For more information consult the page for NW_004624908.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

OCEL1 ENSCPOG00000007032 (Guinea pig)

Gene Details

occludin/ELL domain containing 1

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000006343, Guinea pig)

Protein Percentage 69.85%
CDS Percentage 77.39%
Ka/Ks Ratio 0.22755 (Ka = 0.1866, Ks = 0.8198)

OCEL1 ENSG00000099330 (Human)

Gene Details

occludin/ELL domain containing 1

External Links

Gene Match (Ensembl Protein ID: ENSP00000215061, Human)

Protein Percentage 65.5%
CDS Percentage 75.58%
Ka/Ks Ratio 0.36905 (Ka = 0.2525, Ks = 0.6842)

Ocel1 ENSMUSG00000002396 (Mouse)

Gene Details

occludin/ELL domain containing 1

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000002469, Mouse)

Protein Percentage 62.5%
CDS Percentage 67.28%
Ka/Ks Ratio 0.12069 (Ka = 0.2587, Ks = 2.1433)

Ocel1 ENSRNOG00000032575 (Rat)

Gene Details

occludin/ELL domain containing 1 (Ocel1), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000048493, Rat)

Protein Percentage 61.16%
CDS Percentage 67.86%
Ka/Ks Ratio 0.16467 (Ka = 0.2816, Ks = 1.7099)

Genome Location

Sequence Coding sequence

Length: 900 bp    Location: 684448..681547   Strand: -
Raw sequence   
>XM_004873473.1
ATGGCAGGCACTCTGCTTCGCCCAGGCACCAGGCTGCAGAGCCAAGCCGCTGGAGGCCCAGGAGGAGCCCGCCCCGCCCTTCCCGGGGCGCGCGACCTCGCCAATCAGGTCCAGAGCGCATTTAACGCGCAACTCAGACTCAGGTGCCTTCCCGGCCTCAGACCTAGGCGCGGATCCCGGACGCTGGGACAGGCCGCCCGCAGACCACGCCCGCCACGCTCGGGCCGCGACGCCCCCCGCAGGACCCGACCGCCAGCCCGGGGACCCGCGCCCCGCGCCCCGCCGAGGCCGATGCCCACCCGCGAGCGCCCCCAGGCTCGCGGCTCCCCGGGGAGCCCTTCCGGCCCCGGGCCCCCGACACTGGTGTCTCAAGGCCACAGAGCCGGCGCCCGCCGCCCTCCGTGCCAGCCCCCGCCCGCGCCCCACCAGGCCCGGCCCAGGAAGATCGTGTTTGAGGATGAGCTGCCGCCCCCGGCCCTCCCGGGTGCCAGGAAGCCTGCTGTAGCCGGGCCGAGGGGGCAGACATGCAGGCCCCGCCTAGTACCCGACTACGAGCTTAAGTACCCGCCGCTGAGTAGCCAGAGGGCTCGGAGCCGCTACGTCGCCGTGTTCCAGGACCAGTATGCCGAGCTCTGGAAGCTCCAGTGCGAGGTGGGCGCCACCCAGGCCAGGCTGCAGCAGCTGGCAGCGGTGCTTCGCTCCCTGCCTCCGCCCCGAGGCCAGGAGGAGGCCCGGGCTGCTGCCAGAGTCCGCCGCAAGCTGGAGGAGAAGCACTGGGACCCAGGCTTCCTGCACAGGCAGGCACGCTGTTGCTACCTAAAGGGTAAACTGAGGCATCTCAAGACCCAGATCCAGAAGTTTGATGACCAAGCAGACAGCGAGGGCTCTGTGTACTTCTGA

Related Sequences

XP_004873530.1 Protein

Ocel1 PREDICTED: occludin/ELL domain-containing protein 1 [Heterocephalus glaber]

Length: 299 aa      View alignments
>XP_004873530.1
MAGTLLRPGTRLQSQAAGGPGGARPALPGARDLANQVQSAFNAQLRLRCLPGLRPRRGSRTLGQAARRPRPPRSGRDAPRRTRPPARGPAPRAPPRPMPTRERPQARGSPGSPSGPGPPTLVSQGHRAGARRPPCQPPPAPHQARPRKIVFEDELPPPALPGARKPAVAGPRGQTCRPRLVPDYELKYPPLSSQRARSRYVAVFQDQYAELWKLQCEVGATQARLQQLAAVLRSLPPPRGQEEARAAARVRRKLEEKHWDPGFLHRQARCCYLKGKLRHLKTQIQKFDDQADSEGSVYF