Sequence details NCBI ID: XM_004873396.1 (Coding sequence)

Details from NCBI annotation

Gene Symbol Upf1
Gene Name UPF1 regulator of nonsense transcripts homolog (yeast), transcript variant X4
Entrez Gene ID 101704366

Database interlinks

Part of NW_004624908.1 (Scaffold)

For more information consult the page for NW_004624908.1 (Scaffold)

Genome Location

Sequence Coding sequence

Length: 3357 bp    Location: 1910037..1935370   Strand: +
Raw sequence   
>XM_004873396.1
ATGAGTGTGGAGGCGTACGGGCCCAGCTCGCAGACTCTCACCTTCCTGGACACCGAAGAGGCCGAGCTGCTGGGGGCCGACACGCAGGGCTCCGAGTTCGAATTCACCGACTTCACCCTCCCCAGCCAGACGCAGACGCCCCCCGGCGGCCCCGGCGGCCCGGGCGGGGGTGGCGCTGGGGGCCCCGTCGGCGCGGGCGCGGGCGGCGCGACCGGACAACTCGACGCGCAGGTTGGACCTGAGGGCATCCTGCAGAATGGGGCCGTGGATGACAGTGTGGCCAAGACCAGCCAGCTGTTGGCCGAGCTGAACTTCGAAGAGGATGAAGAAGACACCTACTACACAAAGGACCTCCCCATCCACGCGTGCAGTTACTGCGGAATACACGATCCTGCCTGCGTGGTTTACTGTAATACCAGCAAGAAGTGGTTCTGCAACGGCCGAGGAAATACTTCTGGCAGCCACATTGTAAATCACCTCGTGAGGGCAAAATGCAAAGAGGTGACCCTGCACAAGGATGGGCCGCTGGGGGAGACAGTCCTGGAGTGCTACAACTGCGGCTGCCGCAACGTCTTCCTCCTCGGCTTCATCCCCGCCAAGGCCGACTCGGTCGTGGTCCTGCTGTGCAGGCAGCCCTGCGCCAGCCAGAGCAGCCTCAAGGACATCAACTGGGATAGCTCGCAGTGGCAGCCCCTGATCCAGGACCGCTGCTTCCTGTCCTGGCTGGTCAAGATCCCCTCGGAGCAGGAGCAGCTGCGGGCACGGCAGATCACAGCCCAGCAGATCAACAAGCTGGAGGAGCTCTGGAAGGAAAACCCTTCAGCCACCCTGGAGGACCTGGAGAAGCCAGGGGTAGACGAGGAGCCGCAGCACGTCCTGCTGCGCTACGAAGATGCCTACCAGTACCAGAACATCTTCGGCCCCCTGGTCAAGCTGGAGGCCGACTATGACAAGAAGCTGAAAGAGTCACAGACGCAAGATAACATCACGGTCAGGTGGGACCTGGGCCTTAACAAGAAGAGAATCGCCTACTTCACTTTGCCCAAGACTGACTCTGACATGCGGCTCATGCAGGGGGACGAGATCTGCCTGCGCTATAAGGGGGACCTGGCACCCCTGTGGAAGGGCATCGGCCACGTCATCAAGGTCCCTGACAATTACGGTGATGAGATCGCCATCGAGCTCCGCAGCAGCGTGGGCGCTCCCGTGGAGGTGACGCACAACTTCCAGGTGGACTTCGTGTGGAAGTCGACCTCGTTTGACAGGATGCAGAGTGCGCTGAAGACCTTCGCGGTGGACGAGACCTCCGTGTCAGGCTACATCTACCACAAGCTGCTGGGCCACGAGGTGGAGGACGTGATCATCAAGTGTCAGCTGCCAAAGCGCTTCACTGCGCAGGGGCTCCCCGACCTCAACCACTCGCAGGTATACGCTGTGAAGACTGTGCTGCAGAGGCCGCTCAGCCTCATCCAGGGCCCGCCTGGCACGGGGAAGACCGTGACATCTGCCACCATCGTCTACCACCTGGCTCGGCAGGGCAACGGGCCTGTGCTTGTCTGTGCCCCAAGCAACATCGCCGTGGACCAGCTGACGGAGAAGATCCACCAGACGGGGCTGAAGGTCGTGCGCCTCTGCGCCAAGAGCCGTGAGGCCATCGACTCCCCGGTGTCCTTCCTGGCCCTGCACAACCAGATCAGGAACATGGACAGCATGCCGGAGCTACAGAAGCTGCAGCAGCTGAAGGACGAGACCGGGGAGCTGTCGTCCGCTGACGAGAAGCGGTACCGGGCCCTCAAGCGCACGGCGGAACGGGAGCTGCTCATGAATGCTGACGTCATCTGCTGCACCTGTGTGGGCGCCGGTGACCCGAGGCTTGCCAAGATGCAGTTCCGCTCCATCCTGATCGACGAGAGCACCCAGGCCACGGAGCCTGAGTGCATGGTGCCCGTGGTCCTTGGGGCCAAGCAGCTGATCCTCGTGGGCGACCACTGCCAGCTGGGCCCGGTGGTGATGTGCAAGAAGGCGGCCAAGGCCGGGCTGTCGCAGTCCCTCTTTGAGCGCCTGGTGGTGCTGGGCATCCGCCCCATCCGCCTGCAGGTCCAGTACCGCATGCACCCCGCGCTCAGCGCCTTCCCGTCCAACATCTTCTATGAGGGCTCGCTGCAGAATGGCGTCACTGCAGCCGACCGTGTGAAGAAGGGTTTCGACTTCCAGTGGCCCCAGCCTGACAAGCCCATGTTCTTCTACGTGACCCAGGGCCAGGAGGAGATCGCCAGCTCGGGCACGTCCTACCTGAACAGGACGGAAGCGGCGAATGTGGAGAAGATCACCACCAAGCTGTTGAAGGCCGGTGCCAAGCCTGACCAGATCGGCATCATCACGCCCTATGAGGGCCAGCGCTCCTACCTGGTGCAGTACATGCAGTTCAGCGGCTCCCTGCACACCAAGCTCTACCAGGAGGTGGAGATCGCCAGCGTGGACGCCTTCCAGGGACGCGAGAAGGACTTCATCATCCTGTCCTGTGTGCGGGCCAATGAGCACCAAGGAATCGGCTTTCTAAACGACCCCCGGCGCCTCAACGTAGCCCTGACCAGAGCTAGGTACGGCGTCATCATCGTGGGCAACCCTAAGGCACTGTCGAAGCAGCCGCTGTGGAACCACCTGCTGAACTACTACAAGGAGCAGAAGGTGCTGGTGGAGGGGCCGCTCAACAACCTGCGCGAGAGCCTCATGCAGTTCAGCAAGCCGCGCAAGCTGGTCAACACCATCAACCCGGGGGCCCGCTTCATGACAACTGCCATGTACGACGCCCGGGAAGCCATCATCCCAGGGTCCGTGTACGACCGCAGCAGCCAGGGCCGGCCCTCAAACATGTACTTCCAGACCCACGACCAGATCGGCATGATCAGCGCCGGCCCAAGCCACGTGGCCGCCATGAACATTCCCATCCCCTTCAACCTGGTCATGCCGCCCATGCCGCCGCCCGGCTACTTCGGACAGGCCAACGGGCCGGCAGCAGGCCGGGGTGCCCCGAAAAGCAAGACCAGTCGTGGGGCGCGCCAGAAGAACCGCTTCGGGCTCCCCGGGCCCAGCCAGACCCCCCTCCCCAGCAGCCAGGCCAGCCAGGACGTGGCATCGCAGCCCTTCTCGCAGGGCGCGCTGACGCAGGGCTACATCTCCATGAGCCAGCCCTCCCAGATGAGCCAGCCCGGCCTCTCCCAGCCCGAGCTGTCCCAGGACAGCTACCTGGGTGATGAGTTTAAATCCCAGATCGATGTGGCGCTGTCCCAAGACTCCACGTACCAGGGAGAGCGGGCGTACCAGCACGGCGGGGTGACAGGGCTGTCCCAGTACTAG

Related Sequences

XP_004873453.1 Protein

Upf1 PREDICTED: regulator of nonsense transcripts 1 isoform X4 [Heterocephalus glaber]

Length: 1118 aa      
>XP_004873453.1
MSVEAYGPSSQTLTFLDTEEAELLGADTQGSEFEFTDFTLPSQTQTPPGGPGGPGGGGAGGPVGAGAGGATGQLDAQVGPEGILQNGAVDDSVAKTSQLLAELNFEEDEEDTYYTKDLPIHACSYCGIHDPACVVYCNTSKKWFCNGRGNTSGSHIVNHLVRAKCKEVTLHKDGPLGETVLECYNCGCRNVFLLGFIPAKADSVVVLLCRQPCASQSSLKDINWDSSQWQPLIQDRCFLSWLVKIPSEQEQLRARQITAQQINKLEELWKENPSATLEDLEKPGVDEEPQHVLLRYEDAYQYQNIFGPLVKLEADYDKKLKESQTQDNITVRWDLGLNKKRIAYFTLPKTDSDMRLMQGDEICLRYKGDLAPLWKGIGHVIKVPDNYGDEIAIELRSSVGAPVEVTHNFQVDFVWKSTSFDRMQSALKTFAVDETSVSGYIYHKLLGHEVEDVIIKCQLPKRFTAQGLPDLNHSQVYAVKTVLQRPLSLIQGPPGTGKTVTSATIVYHLARQGNGPVLVCAPSNIAVDQLTEKIHQTGLKVVRLCAKSREAIDSPVSFLALHNQIRNMDSMPELQKLQQLKDETGELSSADEKRYRALKRTAERELLMNADVICCTCVGAGDPRLAKMQFRSILIDESTQATEPECMVPVVLGAKQLILVGDHCQLGPVVMCKKAAKAGLSQSLFERLVVLGIRPIRLQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVKKGFDFQWPQPDKPMFFYVTQGQEEIASSGTSYLNRTEAANVEKITTKLLKAGAKPDQIGIITPYEGQRSYLVQYMQFSGSLHTKLYQEVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDPRRLNVALTRARYGVIIVGNPKALSKQPLWNHLLNYYKEQKVLVEGPLNNLRESLMQFSKPRKLVNTINPGARFMTTAMYDAREAIIPGSVYDRSSQGRPSNMYFQTHDQIGMISAGPSHVAAMNIPIPFNLVMPPMPPPGYFGQANGPAAGRGAPKSKTSRGARQKNRFGLPGPSQTPLPSSQASQDVASQPFSQGALTQGYISMSQPSQMSQPGLSQPELSQDSYLGDEFKSQIDVALSQDSTYQGERAYQHGGVTGLSQY