Sequence details NCBI ID: XM_004873393.1 (Coding sequence)

Details from NCBI annotation

Gene Symbol Upf1
Gene Name UPF1 regulator of nonsense transcripts homolog (yeast), transcript variant X1
Entrez Gene ID 101704366

Database interlinks

Part of NW_004624908.1 (Scaffold)

For more information consult the page for NW_004624908.1 (Scaffold)

Genome Location

Sequence Coding sequence

Length: 3411 bp    Location: 1910037..1935370   Strand: +
Raw sequence   
>XM_004873393.1
ATGAGTGTGGAGGCGTACGGGCCCAGCTCGCAGACTCTCACCTTCCTGGACACCGAAGAGGCCGAGCTGCTGGGGGCCGACACGCAGGGCTCCGAGTTCGAATTCACCGACTTCACCCTCCCCAGCCAGACGCAGACGCCCCCCGGCGGCCCCGGCGGCCCGGGCGGGGGTGGCGCTGGGGGCCCCGTCGGCGCGGGCGCGGGCGGCGCGACCGGACAACTCGACGCGCAGGTTGGACCTGAGGGCATCCTGCAGAATGGGGCCGTGGATGACAGTGTGGCCAAGACCAGCCAGCTGTTGGCCGAGCTGAACTTCGAAGAGGATGAAGAAGACACCTACTACACAAAGGACCTCCCCATCCACGCGTGCAGTTACTGCGGAATACACGATCCTGCCTGCGTGGTTTACTGTAATACCAGCAAGAAGTGGTTCTGCAACGGCCGAGGAAATACTTCTGGCAGCCACATTGTAAATCACCTCGTGAGGGCAAAATGCAAAGAGGTGACCCTGCACAAGGATGGGCCGCTGGGGGAGACAGTCCTGGAGTGCTACAACTGCGGCTGCCGCAACGTCTTCCTCCTCGGCTTCATCCCCGCCAAGGCCGACTCGGTCGTGGTCCTGCTGTGCAGGCAGCCCTGCGCCAGCCAGAGCAGCCTCAAGGACATCAACTGGGATAGCTCGCAGTGGCAGCCCCTGATCCAGGACCGCTGCTTCCTGTCCTGGCTGGTCAAGATCCCCTCGGAGCAGGAGCAGCTGCGGGCACGGCAGATCACAGCCCAGCAGATCAACAAGCTGGAGGAGCTCTGGAAGGAAAACCCTTCAGCCACCCTGGAGGACCTGGAGAAGCCAGGGGTAGACGAGGAGCCGCAGCACGTCCTGCTGCGCTACGAAGATGCCTACCAGTACCAGAACATCTTCGGCCCCCTGGTCAAGCTGGAGGCCGACTATGACAAGAAGCTGAAAGAGTCACAGACGCAAGATAACATCACGGTCAGGTGGGACCTGGGCCTTAACAAGAAGAGAATCGCCTACTTCACTTTGCCCAAGACTGACTCTGGTAATGAGGATTTAGTCATAATTTGGTTAAGAGACATGCGGCTCATGCAGGGGGACGAGATCTGCCTGCGCTATAAGGGGGACCTGGCACCCCTGTGGAAGGGCATCGGCCACGTCATCAAGGTCCCTGACACAAACTTAACTCAGCGCCCAGATTACGGTGATGAGATCGCCATCGAGCTCCGCAGCAGCGTGGGCGCTCCCGTGGAGGTGACGCACAACTTCCAGGTGGACTTCGTGTGGAAGTCGACCTCGTTTGACAGGATGCAGAGTGCGCTGAAGACCTTCGCGGTGGACGAGACCTCCGTGTCAGGCTACATCTACCACAAGCTGCTGGGCCACGAGGTGGAGGACGTGATCATCAAGTGTCAGCTGCCAAAGCGCTTCACTGCGCAGGGGCTCCCCGACCTCAACCACTCGCAGGTATACGCTGTGAAGACTGTGCTGCAGAGGCCGCTCAGCCTCATCCAGGGCCCGCCTGGCACGGGGAAGACCGTGACATCTGCCACCATCGTCTACCACCTGGCTCGGCAGGGCAACGGGCCTGTGCTTGTCTGTGCCCCAAGCAACATCGCCGTGGACCAGCTGACGGAGAAGATCCACCAGACGGGGCTGAAGGTCGTGCGCCTCTGCGCCAAGAGCCGTGAGGCCATCGACTCCCCGGTGTCCTTCCTGGCCCTGCACAACCAGATCAGGAACATGGACAGCATGCCGGAGCTACAGAAGCTGCAGCAGCTGAAGGACGAGACCGGGGAGCTGTCGTCCGCTGACGAGAAGCGGTACCGGGCCCTCAAGCGCACGGCGGAACGGGAGCTGCTCATGAATGCTGACGTCATCTGCTGCACCTGTGTGGGCGCCGGTGACCCGAGGCTTGCCAAGATGCAGTTCCGCTCCATCCTGATCGACGAGAGCACCCAGGCCACGGAGCCTGAGTGCATGGTGCCCGTGGTCCTTGGGGCCAAGCAGCTGATCCTCGTGGGCGACCACTGCCAGCTGGGCCCGGTGGTGATGTGCAAGAAGGCGGCCAAGGCCGGGCTGTCGCAGTCCCTCTTTGAGCGCCTGGTGGTGCTGGGCATCCGCCCCATCCGCCTGCAGGTCCAGTACCGCATGCACCCCGCGCTCAGCGCCTTCCCGTCCAACATCTTCTATGAGGGCTCGCTGCAGAATGGCGTCACTGCAGCCGACCGTGTGAAGAAGGGTTTCGACTTCCAGTGGCCCCAGCCTGACAAGCCCATGTTCTTCTACGTGACCCAGGGCCAGGAGGAGATCGCCAGCTCGGGCACGTCCTACCTGAACAGGACGGAAGCGGCGAATGTGGAGAAGATCACCACCAAGCTGTTGAAGGCCGGTGCCAAGCCTGACCAGATCGGCATCATCACGCCCTATGAGGGCCAGCGCTCCTACCTGGTGCAGTACATGCAGTTCAGCGGCTCCCTGCACACCAAGCTCTACCAGGAGGTGGAGATCGCCAGCGTGGACGCCTTCCAGGGACGCGAGAAGGACTTCATCATCCTGTCCTGTGTGCGGGCCAATGAGCACCAAGGAATCGGCTTTCTAAACGACCCCCGGCGCCTCAACGTAGCCCTGACCAGAGCTAGGTACGGCGTCATCATCGTGGGCAACCCTAAGGCACTGTCGAAGCAGCCGCTGTGGAACCACCTGCTGAACTACTACAAGGAGCAGAAGGTGCTGGTGGAGGGGCCGCTCAACAACCTGCGCGAGAGCCTCATGCAGTTCAGCAAGCCGCGCAAGCTGGTCAACACCATCAACCCGGGGGCCCGCTTCATGACAACTGCCATGTACGACGCCCGGGAAGCCATCATCCCAGGGTCCGTGTACGACCGCAGCAGCCAGGGCCGGCCCTCAAACATGTACTTCCAGACCCACGACCAGATCGGCATGATCAGCGCCGGCCCAAGCCACGTGGCCGCCATGAACATTCCCATCCCCTTCAACCTGGTCATGCCGCCCATGCCGCCGCCCGGCTACTTCGGACAGGCCAACGGGCCGGCAGCAGGCCGGGGTGCCCCGAAAAGCAAGACCAGTCGTGGGGCGCGCCAGAAGAACCGCTTCGGGCTCCCCGGGCCCAGCCAGACCCCCCTCCCCAGCAGCCAGGCCAGCCAGGACGTGGCATCGCAGCCCTTCTCGCAGGGCGCGCTGACGCAGGGCTACATCTCCATGAGCCAGCCCTCCCAGATGAGCCAGCCCGGCCTCTCCCAGCCCGAGCTGTCCCAGGACAGCTACCTGGGTGATGAGTTTAAATCCCAGATCGATGTGGCGCTGTCCCAAGACTCCACGTACCAGGGAGAGCGGGCGTACCAGCACGGCGGGGTGACAGGGCTGTCCCAGTACTAG

Related Sequences

XP_004873450.1 Protein

Upf1 PREDICTED: regulator of nonsense transcripts 1 isoform X1 [Heterocephalus glaber]

Length: 1136 aa      
>XP_004873450.1
MSVEAYGPSSQTLTFLDTEEAELLGADTQGSEFEFTDFTLPSQTQTPPGGPGGPGGGGAGGPVGAGAGGATGQLDAQVGPEGILQNGAVDDSVAKTSQLLAELNFEEDEEDTYYTKDLPIHACSYCGIHDPACVVYCNTSKKWFCNGRGNTSGSHIVNHLVRAKCKEVTLHKDGPLGETVLECYNCGCRNVFLLGFIPAKADSVVVLLCRQPCASQSSLKDINWDSSQWQPLIQDRCFLSWLVKIPSEQEQLRARQITAQQINKLEELWKENPSATLEDLEKPGVDEEPQHVLLRYEDAYQYQNIFGPLVKLEADYDKKLKESQTQDNITVRWDLGLNKKRIAYFTLPKTDSGNEDLVIIWLRDMRLMQGDEICLRYKGDLAPLWKGIGHVIKVPDTNLTQRPDYGDEIAIELRSSVGAPVEVTHNFQVDFVWKSTSFDRMQSALKTFAVDETSVSGYIYHKLLGHEVEDVIIKCQLPKRFTAQGLPDLNHSQVYAVKTVLQRPLSLIQGPPGTGKTVTSATIVYHLARQGNGPVLVCAPSNIAVDQLTEKIHQTGLKVVRLCAKSREAIDSPVSFLALHNQIRNMDSMPELQKLQQLKDETGELSSADEKRYRALKRTAERELLMNADVICCTCVGAGDPRLAKMQFRSILIDESTQATEPECMVPVVLGAKQLILVGDHCQLGPVVMCKKAAKAGLSQSLFERLVVLGIRPIRLQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVKKGFDFQWPQPDKPMFFYVTQGQEEIASSGTSYLNRTEAANVEKITTKLLKAGAKPDQIGIITPYEGQRSYLVQYMQFSGSLHTKLYQEVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDPRRLNVALTRARYGVIIVGNPKALSKQPLWNHLLNYYKEQKVLVEGPLNNLRESLMQFSKPRKLVNTINPGARFMTTAMYDAREAIIPGSVYDRSSQGRPSNMYFQTHDQIGMISAGPSHVAAMNIPIPFNLVMPPMPPPGYFGQANGPAAGRGAPKSKTSRGARQKNRFGLPGPSQTPLPSSQASQDVASQPFSQGALTQGYISMSQPSQMSQPGLSQPELSQDSYLGDEFKSQIDVALSQDSTYQGERAYQHGGVTGLSQY