Sequence details NCBI ID: XM_004873351.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Lrrc25
Gene Name leucine rich repeat containing 25, transcript variant X3
Entrez Gene ID 101722802

Database interlinks

Part of NW_004624908.1 (Scaffold)

For more information consult the page for NW_004624908.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

LRRC25 ENSCPOG00000024702 (Guinea pig)

Gene Details

leucine rich repeat containing 25

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000020570, Guinea pig)

Protein Percentage 61.07%
CDS Percentage 74.16%
Ka/Ks Ratio 0.26673 (Ka = 0.2442, Ks = 0.9155)

LRRC25 ENSG00000175489 (Human)

Gene Details

leucine rich repeat containing 25

External Links

Gene Match (Ensembl Protein ID: ENSP00000340983, Human)

Protein Percentage 56.42%
CDS Percentage 67.57%
Ka/Ks Ratio 0.21655 (Ka = 0.3353, Ks = 1.5483)

Lrrc25 ENSMUSG00000049988 (Mouse)

Gene Details

leucine rich repeat containing 25

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000049686, Mouse)

Protein Percentage 48.07%
CDS Percentage 60.12%
Ka/Ks Ratio 0.13997 (Ka = 0.4323, Ks = 3.0888)

Lrrc25 ENSRNOG00000022565 (Rat)

Gene Details

Protein Lrrc25

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000032464, Rat)

Protein Percentage 48.98%
CDS Percentage 61.56%
Ka/Ks Ratio 0.15259 (Ka = 0.4098, Ks = 2.6853)

Genome Location

Sequence Coding sequence

Length: 900 bp    Location: 1646926..1637774   Strand: -
Raw sequence   
>XM_004873351.1
ATGCTGGCCTGGCCAATGCTGCTGCTGCTGCTGGTGCTACTGCTGCAGGGGCTGCGGAGCCAGGAGCCGTCCTGCGCCGTCTTCCTGGGAGACCTGGACTGGAGCCACGAGTTCAATGCCAGCTGCCTGAACTTCAGCGGCCGTGCGCTGCGCCTGCCCCTGGACCGGCCGCTGCGGGCCTCGAACCTGCGGCTTCTCGACCTGTCGGGCACTGGGCTGCGGGAGCTGCCCCTGCCCTTCCTGGCACCCCTGCGGCAGCTGCAGGTCCTCTGCATCCTGCACAACCGGCTGGACCGCGTGGATGCGGCGTTGGCTGCTCACTGCGACCTGGACCTCAGGGCCGACTGCGGCTGTGCCCTGGGTCCCTGGCACCAGGCCCGGCACGACAACTGCTCGGGCCAGAAGCCCCTGCACTGCCTGCACCCAGCCACAGGCGCCTGGCGGAACCTCTCCGCCTTCCTGGAGCTCAGCTGCGCCCCTGGCCTGGCCCCGGGCAGCGTCGCAGGAGTGGTGGCAGGCAGTGTCCTCCTCCTCACGCTTGTGGCTGCGGGCGCCATGCTGGCCTGGAGGCGCTCCAGGCTCCGCTCGGCCAGCAACCAGGGCCCAGGCAAGGCCTGGGCACCTCCGGAGGGGGCCAGGCCCGGCTCGGGTGTCCAGCCTCGGTACACCAGCCGCATCCCAGGGCTCAAGGCCCCGGGCCTCACGCTGCCCGGCACCGCTGCGCCTGACTACGAGAACATATTCGTGGGACAGCCGGAGTGGCTAAGTAACGGGGCTCACCCTTCTGAGGACGGCGATTTCTATATGAACTACAGGGGCCCCAGCCTGGATGTGCAGCCCGTCTACGGCAACCTGCAGGGCCCTGAGCAGGAAGACGAGTACGAGATCTCCCAACACTGA

Related Sequences

XP_004873408.1 Protein

Lrrc25 PREDICTED: leucine-rich repeat-containing protein 25 isoform X3 [Heterocephalus glaber]

Length: 299 aa      View alignments
>XP_004873408.1
MLAWPMLLLLLVLLLQGLRSQEPSCAVFLGDLDWSHEFNASCLNFSGRALRLPLDRPLRASNLRLLDLSGTGLRELPLPFLAPLRQLQVLCILHNRLDRVDAALAAHCDLDLRADCGCALGPWHQARHDNCSGQKPLHCLHPATGAWRNLSAFLELSCAPGLAPGSVAGVVAGSVLLLTLVAAGAMLAWRRSRLRSASNQGPGKAWAPPEGARPGSGVQPRYTSRIPGLKAPGLTLPGTAAPDYENIFVGQPEWLSNGAHPSEDGDFYMNYRGPSLDVQPVYGNLQGPEQEDEYEISQH