Sequence details NCBI ID: XM_004873339.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Ifi30
Gene Name interferon, gamma-inducible protein 30
Entrez Gene ID 101719747

Database interlinks

Part of NW_004624908.1 (Scaffold)

For more information consult the page for NW_004624908.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

IFI30 ENSCPOG00000005553 (Guinea pig)

Gene Details

interferon, gamma-inducible protein 30

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000005000, Guinea pig)

Protein Percentage 76.13%
CDS Percentage 79.29%
Ka/Ks Ratio 0.10944 (Ka = 0.1366, Ks = 1.2477)

IFI30 ENSG00000216490 (Human)

Gene Details

interferon, gamma-inducible protein 30

External Links

Gene Match (Ensembl Protein ID: ENSP00000384886, Human)

Protein Percentage 65.43%
CDS Percentage 69.96%
Ka/Ks Ratio 0.11967 (Ka = 0.2507, Ks = 2.0946)

Ifi30 ENSMUSG00000031838 (Mouse)

Gene Details

interferon gamma inducible protein 30

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000034299, Mouse)

Protein Percentage 64.75%
CDS Percentage 70.36%
Ka/Ks Ratio 0.02818 (Ka = 0.2085, Ks = 7.3987)

Ifi30 ENSRNOG00000019387 (Rat)

Gene Details

interferon gamma inducible protein 30 (Ifi30), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000026225, Rat)

Protein Percentage 70.78%
CDS Percentage 72.98%
Ka/Ks Ratio 0.05322 (Ka = 0.1746, Ks = 3.2804)

Genome Location

Sequence Coding sequence

Length: 735 bp    Location: 1525323..1528202   Strand: +
Raw sequence   
>XM_004873339.1
ATGGCCCTTCCGCCCCTCGCCCCGCTGCTGCCGCTGCTGCCGCTGCTGCTGTCGCTCCCGGGCGTCCCTGCGATGGCCCTGGACACCTCCGCGGGGGCGGCCGGCTGCAAGCCGCACGGCCTGTGCCTGCAGAGCACCCCCAGGGTGACCGACGCACCCCCAGTCAACGTCACCCTGTACTACGAGGCGCTGTGCGGCAGCTGCCGGATGTTCCTGGTGCGCGACCTCTTTCCAACCTGGCTCCTGGTGCTGGAGATCCTCAACGTCACGCTGGTGCCCTACGGGAACGCCGTGGAGCGGAGCGTCAATGGCTCCTGGGAGTTCAGGTGCCAGCACGGCGAGCAGGAGTGTAAGCTGAACAAGGTGGAGGCCTGCGTACTGGACCAGCTGGATCAGGACGCCGCCTTCCTGACCATCATCTGCCTCGAGGAGATGGAGGACATGGAGAAGAAGCTGACGCCGTGTCTGCAGTTATATGCGGCCAATGTGTCAGCGGACAGCATCATGGCATGTGCGGAGGGGGAGCGCGGCACACAGCTGCTGCACCGGAACGCACAGCTCACGGATGCCCTGCAGCCGCCGCATGAATACGTGCCCTGGGTCCTCGTCAACGGGAAACCTTTGAAAGACCTGAGCCAGCTTTTGAGTCTGGTCTGCCAGCTGTACCAGGGCCAGGAGAAGCCAGACATCTGCTCGGCCATGGGCAGCACCCGAAGAGAGGTCTGCTTCAAATGA

Related Sequences

XP_004873396.1 Protein

Ifi30 PREDICTED: gamma-interferon-inducible lysosomal thiol reductase [Heterocephalus glaber]

Length: 244 aa      View alignments
>XP_004873396.1
MALPPLAPLLPLLPLLLSLPGVPAMALDTSAGAAGCKPHGLCLQSTPRVTDAPPVNVTLYYEALCGSCRMFLVRDLFPTWLLVLEILNVTLVPYGNAVERSVNGSWEFRCQHGEQECKLNKVEACVLDQLDQDAAFLTIICLEEMEDMEKKLTPCLQLYAANVSADSIMACAEGERGTQLLHRNAQLTDALQPPHEYVPWVLVNGKPLKDLSQLLSLVCQLYQGQEKPDICSAMGSTRREVCFK