Sequence details NCBI ID: XM_004873315.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Fcho1
Gene Name FCH domain only 1
Entrez Gene ID 101712757

Database interlinks

Part of NW_004624908.1 (Scaffold)

For more information consult the page for NW_004624908.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

FCHO1 ENSCPOG00000010411 (Guinea pig)

Gene Details

FCH domain only 1

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000009349, Guinea pig)

Protein Percentage 91.07%
CDS Percentage 90.14%
Ka/Ks Ratio 0.09734 (Ka = 0.0429, Ks = 0.4409)

FCHO1 ENSG00000130475 (Human)

Gene Details

FCH domain only 1

External Links

Gene Match (Ensembl Protein ID: ENSP00000473001, Human)

Protein Percentage 88.04%
CDS Percentage 84.75%
Ka/Ks Ratio 0.06837 (Ka = 0.0606, Ks = 0.8857)

Fcho1 ENSMUSG00000070000 (Mouse)

Gene Details

FCH domain only 1

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000091151, Mouse)

Protein Percentage 84.25%
CDS Percentage 80.06%
Ka/Ks Ratio 0.06287 (Ka = 0.0865, Ks = 1.3753)

Fcho1 ENSRNOG00000033912 (Rat)

Gene Details

FCH domain only 1 (Fcho1), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000049715, Rat)

Protein Percentage 79.93%
CDS Percentage 78.14%
Ka/Ks Ratio 0.09016 (Ka = 0.1177, Ks = 1.305)

Genome Location

Sequence Coding sequence

Length: 2589 bp    Location: 1327592..1340728   Strand: +
Raw sequence   
>XM_004873315.1
ATGAAGCAGGGGCCCATTTCCACCAAGGAGCTGGCTGACTTCATCCGGGAGAGGGCCACCATCGAGGAGACCTACTCAAAGGCGATGGCGAAACTTTCCAAGCTGGCCAGCAACGGGACCCCCATGGGGACCTTCGCCCCGCTCTGGGAGGTCTTCCGCGTATCCTCTGACAAGCTGGCCCTGTGCCACCTGGAGCTGACGCGGAAGCTGCAGGACCTCATCAAGGACGTGCTCCGCTATGGGGAGGAGCAGCTCAAGACCCACAAGAAGTGTAAGGACGAAGTGGGGGGCACCCTGGACGAGGTCCAGCTGCTCGCCGGCGTCACCCAGCTGCTGCCCAAGTCCCGCGAGAACTACCTGAGCCGCTGCGTGGACCTGGAGCGCCTGCGCAGAGAGAACACCAGCCAGAAGGAGGTGGACAAGGCGGAAACCAAAGCCAAGAAGGCGGCCGAGAGCCTGCGGCGCTCCGTGGGGAAGTACAACTCGGCCCGGGCCGACTTCGAGCAGAAGATGCTGGACTCCGCGCTGTGCTTCCAAACCATGGAGGAGACCCACCTGCGGCACATGAAGGCACTGCTGGGCTCCTATGCCCACTCAGTGGAGGACACGCACGTGCAGATCGGGCAGGTGCATGAGGAGTTCAAACAGAACATTGAGAACGTCAGTGTGGACATGCTGCTCAGGAAGTTCGCCGAGAGCAAAGGCACAGGCCAGGAGAAGCCAGGGCCCTTGGACTTCGACTCGTACAGTGCGGCCACACTGCAGGAAGCAATGAAGCGACTTCGGGGAGCAAAGGCCTTTCGCCTGCCTGGACTAAGCCGGCGGGAGCGGGAACCTCGTGTGGCTGTAGACTTCCTGGAGCCTGATTCAGGGATGTGTCCAGAGGTGGATGAGGAAGGTTTCACCATCCGGCCCGACGTGACCCAGAACAGCACGGCCGAGCCCTCCCGCTTTTCATCCAGCGACTCGGACTTCGATGACGACGAGCCTAGAAAGTTCTACGTGCACATCAAGCCCGCCCCGGCCCGCGCTCCGGCCTGCAGCTCCGAGGCGGTGGCGGCGCAGCTCAGGGCCACGGCCGGCAGCCTCGCCCTGCCCCCGGGCGCAGGGGGCACCATGAAGCGCCACTCCTCGCGCGACACTGCTGGGAAGCCGCAGAGGCCTCGGTCCGCACCGCGGGCAAGCAGCTGCGCGGAGAAGCTGTCGTCCTCTGAGGAGCAGGCGTCCAAGAGCCTCTTTGGGCCGCCCCTGGAGTCAGCCTTGGACCACGAGGACTTTACGGGCTCCAGCAGCCTCGGCTTCACCTCCAGCCCCTCCCCTTTCTCCTCCTCCTCACCGGAGAACGTGGAGGACTCTGGTTTGGACTCTCCATCCCATGCAGCTACGGGCCCCTCGCCAGACTCCTGGGTCCCTCACCCAGGCACCCCACAGAGCCCACCCGGCTGTACGGCGCAGCCTCCAGAAACCAGGGCGGCCCGGGTCCCACCACCGCCCGACTCGCCACAGCCCCTGGCACCATCACCAGGACTTTGGGGGCTGGAGGCCCGAGGGGAACCAACAGCCACAGATCCTGTAGCCAGAGAGGGCCTGGCGGCCCCGGCCCGGAGACCCCGCTCCAGGAAGGTGTCATGTCCCCTGACCCGGAGCAACGGCGACCTGTCCCGGTCCCTGAGCCCCTCCCCACTGGGCTCATCAGCCCCCAGCATGGCTCCAGATCGGCCCAACTTCTCATCTCAGACTGGACACGGAGTCTCCCGGGGCCCCAGTCCTATAGTCCTGGGCTCCCAGGATGCGCTGCCCGTGGCCACCGCCTTCACTGAGTACGTCCACGCCTACTTCCATGCCCACAGCCCCAGCTGCATGGCTCGGGTCACTGGAGAGCTGACCATGACCTTCCCAGCCGGCATCGTGCGCGTGTTCAGCGGGACCCCACCCCCGCCAGTGCTCAGCTTCCGGCTCATCCACATGGCTGGCATCCAGCACGTCCAGCCCAATGCTGACCTGCTCTTCAGTGACCCTTCCCAGAGTGACCCAGAGACCAAAGACTTCTGGCTCAACATGGCTGCTCTGACTGAGGCCCTGCAGCGCCAGGCGGAGCAGAACCCCGCAGCCTCCTACTACAACGTGGTGCTGCTGAGATACCAGTTCTCCCGCCCGGGCCCCCAGGCGCTGCCTCTGCAGCTGCACGCACACTGGCAGTGTGGGGCGGCGCTCACGCAGGTGGCCGTAGAATACAGCTACTGTGCCGGCGCCACGGCCGTGCCCACGTCGCTCTCCAACGTCCAGATCCTGCTCCCCGTGGGCGAGCGCGTCACCAACGTGCGCCTGCAGCCGGCTGCCACCTGGAGCCTGGAGGAAAAACGATTCGTGTGGAAGCTCCCGGATGTGTCAGAGGCAGGGGGCTCTGGCCGCCTCTCTGCCAGCTGGGAGCCGCTGTCGGGGCCCAGCACCCCCAGCCCCGTGGCCGCACAGTTCATGAGTGAGGGGGCCACTCTGTCGGGCATTGATGTGGAGCTGGTGGGCATCGGCTATCGCATGTCCCTGGTGAAGAGGAGGTTTGCCACAGGGATGTACCTCGTGAGCTGCTGA

Related Sequences

XP_004873372.1 Protein

Fcho1 PREDICTED: FCH domain only protein 1 [Heterocephalus glaber]

Length: 862 aa      View alignments
>XP_004873372.1
MKQGPISTKELADFIRERATIEETYSKAMAKLSKLASNGTPMGTFAPLWEVFRVSSDKLALCHLELTRKLQDLIKDVLRYGEEQLKTHKKCKDEVGGTLDEVQLLAGVTQLLPKSRENYLSRCVDLERLRRENTSQKEVDKAETKAKKAAESLRRSVGKYNSARADFEQKMLDSALCFQTMEETHLRHMKALLGSYAHSVEDTHVQIGQVHEEFKQNIENVSVDMLLRKFAESKGTGQEKPGPLDFDSYSAATLQEAMKRLRGAKAFRLPGLSRREREPRVAVDFLEPDSGMCPEVDEEGFTIRPDVTQNSTAEPSRFSSSDSDFDDDEPRKFYVHIKPAPARAPACSSEAVAAQLRATAGSLALPPGAGGTMKRHSSRDTAGKPQRPRSAPRASSCAEKLSSSEEQASKSLFGPPLESALDHEDFTGSSSLGFTSSPSPFSSSSPENVEDSGLDSPSHAATGPSPDSWVPHPGTPQSPPGCTAQPPETRAARVPPPPDSPQPLAPSPGLWGLEARGEPTATDPVAREGLAAPARRPRSRKVSCPLTRSNGDLSRSLSPSPLGSSAPSMAPDRPNFSSQTGHGVSRGPSPIVLGSQDALPVATAFTEYVHAYFHAHSPSCMARVTGELTMTFPAGIVRVFSGTPPPPVLSFRLIHMAGIQHVQPNADLLFSDPSQSDPETKDFWLNMAALTEALQRQAEQNPAASYYNVVLLRYQFSRPGPQALPLQLHAHWQCGAALTQVAVEYSYCAGATAVPTSLSNVQILLPVGERVTNVRLQPAATWSLEEKRFVWKLPDVSEAGGSGRLSASWEPLSGPSTPSPVAAQFMSEGATLSGIDVELVGIGYRMSLVKRRFATGMYLVSC