Details from NCBI annotation

Gene Symbol Tpm4
Gene Name tropomyosin 4, transcript variant X3
Entrez Gene ID 101709758

Database interlinks

Part of NW_004624908.1 (Scaffold)

For more information consult the page for NW_004624908.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

TPM4 ENSCPOG00000013643 (Guinea pig)

Gene Details

tropomyosin 4

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000012282, Guinea pig)

Protein Percentage 98.39%
CDS Percentage 91.4%
Ka/Ks Ratio 0.01712 (Ka = 0.0077, Ks = 0.4488)

TPM4 ENSG00000167460 (Human)

Gene Details

tropomyosin 4

External Links

Gene Match (Ensembl Protein ID: ENSP00000439135, Human)

Protein Percentage 85.89%
CDS Percentage 84.54%
Ka/Ks Ratio 0.22202 (Ka = 0.1141, Ks = 0.514)

Tpm4 ENSMUSG00000031799 (Mouse)

Gene Details

tropomyosin 4

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000003575, Mouse)

Protein Percentage 95.56%
CDS Percentage 89.11%
Ka/Ks Ratio 0.03533 (Ka = 0.0205, Ks = 0.5813)

Tpm4 ENSRNOG00000015496 (Rat)

Gene Details

tropomyosin 4 (Tpm4), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000021073, Rat)

Protein Percentage 97.58%
CDS Percentage 90.05%
Ka/Ks Ratio 0.01906 (Ka = 0.011, Ks = 0.5786)

Genome Location

Sequence Coding sequence

Length: 747 bp    Location: 1151656..1135241   Strand: -
>XM_004873308.1
ATGGCCGGGCTCAACTCACTGGAGGCGGTGAAGCGCAAGATCCAGGCGCTGCAGCAGCAGGCGGACGACGCGGAGGACCGCGCGCAAGGCCTGCAGCGCGAGCTGGATGGCGAGCGCGAGCGCCGCGAGAAAGCCGAGGGAGATGTGGTGGCTCTCAATCGACGCATCCAACTTGTGGAGGAGGAGTTGGACCGGGCTCAGGAACGACTGGCCACCGCCCTGCAGAAACTGGAGGAAGCAGAAAAGGCTGCAGACGAGAGTGAGAGAGGAATGAAGGTGATAGAAAACCGGGCCATGAAAGATGAGGAGAAGATGGAGATCCAAGAGTTGCAGCTCAAAGAGGCCAAGCACATTGCTGAGGAGGCTGACCGCAAATATGAGGAGGTAGCTCGTAAGTTGGTCATCCTGGAGGGCGAGCTGGAAAGGGCAGAGGAGCGTGCGGAGGTGTCTGAACTAAAATGCGGTGACCTGGAAGAAGAACTCAAAAATGTCACTAACAACCTGAAATCGCTCGAAGCTGCATCTGAAAAGTATTCTGAAAAGGAGGATAAATATGAAGAAGAAATTAAACTTCTGTCTGACAAACTGAAAGAGGCTGAGACCCGCGCTGAATTTGCAGAGAGAACGGTTGCAAAACTGGAAAAGACCATTGATGACCTGGAAGAAAAACTTGCCCAGGCCAAAGAAGAGAACGTGGGCTTACATCAGACACTGGATCAGACGCTAAATGAACTTAACTGTATATAA

Related Sequences

XP_004873365.1 Protein

Tpm4 PREDICTED: tropomyosin alpha-4 chain isoform X3 [Heterocephalus glaber]

Length: 248 aa      View alignments
>XP_004873365.1
MAGLNSLEAVKRKIQALQQQADDAEDRAQGLQRELDGERERREKAEGDVVALNRRIQLVEEELDRAQERLATALQKLEEAEKAADESERGMKVIENRAMKDEEKMEIQELQLKEAKHIAEEADRKYEEVARKLVILEGELERAEERAEVSELKCGDLEEELKNVTNNLKSLEAASEKYSEKEDKYEEEIKLLSDKLKEAETRAEFAERTVAKLEKTIDDLEEKLAQAKEENVGLHQTLDQTLNELNCI