Sequence details NCBI ID: XM_004873303.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Hsh2d
Gene Name hematopoietic SH2 domain containing, transcript variant X2
Entrez Gene ID 101708564

Database interlinks

Part of NW_004624908.1 (Scaffold)

For more information consult the page for NW_004624908.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

ENSCPOG00000020225 (Guinea pig)

Gene Details

Uncharacterized protein

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000021193, Guinea pig)

Protein Percentage 70.68%
CDS Percentage 77.47%
Ka/Ks Ratio 0.22487 (Ka = 0.1906, Ks = 0.8476)

Hsh2d ENSMUSG00000062007 (Mouse)

Gene Details

hematopoietic SH2 domain containing

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000127575, Mouse)

Protein Percentage 55.49%
CDS Percentage 64.16%
Ka/Ks Ratio 0.21592 (Ka = 0.3584, Ks = 1.6598)

Hsh2d ENSRNOG00000023614 (Rat)

Gene Details

hematopoietic SH2 domain containing (Hsh2d), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000037214, Rat)

Protein Percentage 54.37%
CDS Percentage 63.44%
Ka/Ks Ratio 0.17873 (Ka = 0.3486, Ks = 1.9504)

Genome Location

Sequence Coding sequence

Length: 990 bp    Location: 1114927..1108595   Strand: -
Raw sequence   
>XM_004873303.1
ATGGCAGGGCCTGAGAGGCTGCCCCCGCCACTGCCTCCTCGCCTGGACTGGTTTGTGCAGACCCAGATGGGCCAGCTCGCCCAGGATGGCGTCCCCGAGTGGTTCCACGGCGCCATCTCCCGAGGGGATGCCGAGAACTTGCTGGAGTCGCAGCCACCGGGATCCTTCCTCATCCGGGTTAGCCACAGCCACGTGGGCTACACCTTATCCTACAGGGTGCAGGGCCGCTGCCACCACGCTATGGTGACTCTGCAGGACGACGGCCGCCTGGTGCTGCTGGGGGACGACGCGGTCCACGCCTCGCTGTGCGCCCTGGTGGCCTTCTACCAGCGCAGGCCCCTGCGGCCGCACGGGCAGCTGCTCACGCAGGGCTGCGGGCAGAAGGATCCGGCCACCGTGGACTACGAGGACCTCCTGCGCTACGCTGCCGCCCTGGCCCAGGACACCACCAGCCCAGAGCCCAGCCCTGAAGAGCATGAAGGGCCCTGCTCATGCCCAGAGGGTCCTCCAAAGCCCGCCCTGCTCCACCAGCTGAAGGAAAAGGAGGTGTCTACAGAGGAAGTCCCCTCCTCCTGCTCTCCAAGGGTGCCTTTGCGGGGGGCTGGCCCAAAACTCTGGAAGAACCTCAGGGCGCTGCCCGAGACGGGCCGGAGGGTCCAACAGCAGCTGAAAGGCTGCCTCGCAGCTGTGAGCCTCGCGTCGCTCTGGGATGCACGGCCATCAGCGGTGACCCACAGCTCCAAGGCCAGGGCCCCTTTTGTGGCCACATCCCTGGAGAACCCCCCACAGCGCCAGGTCCTGAGCGACAGGGACACCGCCTCCAGGAAGGCCACCAGGCCTACCAGCTGGAGCGGGGCGACCCCAGGGGAGCGGGGCTGGCACCAGAAGGTCGTGAGGGCTCTGTCCTTCCAGCCATCCGAGCCGAAGCCGAGGGACTGGCTCCCCGAGGAGTACCTGCAGCCCCCACCCTTTGCACCCGGGTACTGCTAG

Related Sequences

XP_004873360.1 Protein

Hsh2d PREDICTED: hematopoietic SH2 domain-containing protein isoform X2 [Heterocephalus glaber]

Length: 329 aa      
>XP_004873360.1
MAGPERLPPPLPPRLDWFVQTQMGQLAQDGVPEWFHGAISRGDAENLLESQPPGSFLIRVSHSHVGYTLSYRVQGRCHHAMVTLQDDGRLVLLGDDAVHASLCALVAFYQRRPLRPHGQLLTQGCGQKDPATVDYEDLLRYAAALAQDTTSPEPSPEEHEGPCSCPEGPPKPALLHQLKEKEVSTEEVPSSCSPRVPLRGAGPKLWKNLRALPETGRRVQQQLKGCLAAVSLASLWDARPSAVTHSSKARAPFVATSLENPPQRQVLSDRDTASRKATRPTSWSGATPGERGWHQKVVRALSFQPSEPKPRDWLPEEYLQPPPFAPGYC