Sequence details NCBI ID: XM_004873274.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Cherp
Gene Name calcium homeostasis endoplasmic reticulum protein, transcript variant X4
Entrez Gene ID 101700309

Database interlinks

Part of NW_004624908.1 (Scaffold)

For more information consult the page for NW_004624908.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

CHERP ENSCPOG00000019949 (Guinea pig)

Gene Details

calcium homeostasis endoplasmic reticulum protein

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000017191, Guinea pig)

Protein Percentage 97.2%
CDS Percentage 90.13%
Ka/Ks Ratio 0.01463 (Ka = 0.0125, Ks = 0.8575)

CHERP ENSG00000085872 (Human)

Gene Details

calcium homeostasis endoplasmic reticulum protein

External Links

Gene Match (Ensembl Protein ID: ENSP00000439856, Human)

Protein Percentage 96.47%
CDS Percentage 88.75%
Ka/Ks Ratio 0.01306 (Ka = 0.0159, Ks = 1.2146)

Cherp ENSMUSG00000052488 (Mouse)

Gene Details

calcium homeostasis endoplasmic reticulum protein

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000078469, Mouse)

Protein Percentage 94.44%
CDS Percentage 84.71%
Ka/Ks Ratio 0.01301 (Ka = 0.0257, Ks = 1.9745)

Cherp ENSRNOG00000012323 (Rat)

Gene Details

calcium homeostasis endoplasmic reticulum protein (Cherp), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000017424, Rat)

Protein Percentage 94.44%
CDS Percentage 85.26%
Ka/Ks Ratio 0.01614 (Ka = 0.0256, Ks = 1.5848)

Genome Location

Sequence Coding sequence

Length: 2763 bp    Location: 926067..936762   Strand: +
Raw sequence   
>XM_004873274.1
ATGGAGATGCCGCTGCCGCCAGACGACCAGGAGCTCCGAAATGTCATCGACAAGCTGGCGCAGTTCGTGGCTCGCAATGGGCCCGAGTTTGAGAAAATGACGATGGAGAAGCAAAAGGACAACCCGAAGTTCTCGTTCCTGTTCGGAGGCGAGTTCTACAGTTACTACAAGTGCAAGCTGGCGCTGGAGCAGCAGCAGCTCATTTGCAAGCAGCAGGCACCTGAGCTGGAGCCCCCTGCCACCCTGCCCCCCTTGCCGCAGCCCCCACTGGCACCTGCCGCGCCCGTGCCACCAGCCCAGGGCACCCCATCAGTGGATGAGCTTATCCAGCAGAGCCAGTGGAACCTGCAGCAGCAAGAGCAGCACCTGCTGGCCCTCAGACAGGAGCAAGTGACAGCGGCTGTGGCCCATGCCGTGGAGCAGCAGATGCAGAAGCTGCTGGAGGAGACACAGCTGGACATGAACGAGTTCGACAACCTGCTGCAGCCCATCATCGACACGTGCACCAAGGATGCCATCTCGGCCGGGAAGAACTGGATGTTCAGCAACGCCAAGTCCCCACCACACTGCGAGCTGATGGCTGGCCACCTCCGCAACCGAATCACAGCCGATGGCGCGCACTTCGAGCTCCGCCTACACCTCATCTACCTGATCAACGACGTGCTGCACCACTGCCAGCGCAAGCAGGCGCGGGAGCTGCTGGCCGCCCTGCAGAAGGTGGTGGTGCCCATCTACTGCACCAGCTTCCTGGCTGTGGAGGAGGACAAGCAGCAGAAGATCGCCCGGCTCCTGCAGCTCTGGGAGAAGAATGGGTACTTCGATGACTCCATCATTCAGCAGTTACAGAGCCCGGCCCTGGGCCTCGGCCAGTACCAGGCCACCCTGGTCAGCGAGTACTCATCGGTGGTGCAGCCCGTGCAGCTGGCCTTCCAGCAGCAGATCCAGACGCTGAAGACGCAGCACGAGGAGTTCGTCAGCAGCCTGGCCCAGCAGCAGCAGCAGCAGCAGGTCCAGATGCCCCAGCTGGAGCCCGAGGTCAAGGCCACGCCGCCCCCACCAGCACCGGCACCACCGCCAGCACCCACGCCCACCCCGGCCATCCCACCAACCACCCAGCCTGATGACAGCAAGCCGCCCATCCAGATGCCCAGCTCCTCAGAGTACGATACTGCAGGGGCTGTCCAGGATCCTGCGGCCGCAGGCCCCCGGGGCCCTGGGCCCCATGACCAGATCCCACCCACCAAGCCCCCCTGGTTTGACCAGCCGCACCCGGTCGCCCCCTGGGGCCAGCAGCAGCCGCCCGAGCAGCCCCCATACCCGCACCACCAAGGAGGCCCGCCCCACTGCCCACCCTGGAGCAACAGCCACGAGGGCATGTGGGGCGAGCAGCGCGGGGAGCCCGGCTGGAGCGGCCAGCGAGACGCGCCCTGGAACAGCCAGCCCGACCCCAACTGGAACAGCCAGTTCGAGGGCCCCTGGAACAGCCAGCACGAGCAGCCGCCCTGGGGCGCGGGGCAGCGTGAGCCGCCCTTCCGCATGCAGCGGCCGCCACACTTCCGAGGGCCCTTCCCGCCCCACCAGCAGCACCCGCAGTTCGGCCAGCCGCCGCACCCGCACAACTTCAACCGCTTCCCACCCCGCTTCATGCAGGACGACTTCCCCCCGCGGCACCCCTTCGAACGGCCCCCGTACCCACACCGCTTCGACTACCCGCAGGGCGACTTCCCCGCCGAGATGGGGCCTCCCCACCACCATCCCGGCCACCGCATGCCTCACCCTGGGATCAACGAGCACCCGCCCTGGGCCGGGCCCCAGCACCCCGACTTTGGCCCGCCCCCCCACGGCTTCAACGGGCAGCCGCCCCACATGCGGCGCCAGGGCCCGCCCCACATCAACCACGACGACCCCAGCCTGGTGCCCAACGTGCCCTACTTCGACCTCCCCGCCGGGCTCATGGCCCCACTGGTGAAGCTGGAAGACCACGAGTACAAGCCCCTGGACCCCAAGGACATCCGCCTCCCGCCCCCCATGCCGCCCAGCGAGAGGCTGCTGGCCGCGGTAGAGGCCTTCTACAGCCCGCCCTCCCACGACAGGCCCCGCAACAGCGAAGGCTGGGAGCAGAACGGCCTCTACGAGTTCTTCCGAGCCAAGATGCGCGCGCGGCGGCGGAAGGGCCAGGAGAAGAGGAACAGGTCCCGGAGCAGATCCAAGAGCCGGGGCCGCTCCTCCTCCCGCTCCAACTCGCGCTCCTCCAAGTCGTCGGCCTCCTACTCACGCTCCCGGTCACGCTCCTGCTCGCGCTCCTACTCGCGCTCCCGGTCCAGGAGCCGCAGCCGGTCCCGCTCCTCCCGGAGCCGCTCCAGGTCCCGCTCTCGGTCCCGGTCCAAGTCCTACTCCCCGGGGAGGAGGCGCCGCTCTCGGTCCCGGAGCCCCACGCCACCTTCCTCGGCGGGTCTGGGTTCGAATTCGGCACCTCCCATACCCGACTCTCGGCTCGGGGAAGAGAACAAGGGGCACCAGATGCTGGTGAAGATGGGCTGGAGCGGCTCTGGCGGCCTGGGCGCCAAGGAGCAGGGCATCCAGGACCCCATCAAGGGCGGGGATGTGCGCGACAAGTGGGACCAGTACAAGGGCGTGGGCGTGGCGCTGGACGACCCCTACGAGAACTACCGGCGCAACAAGAGCTACTCGTTCATCGCGCGCATGAAGGCCCGGGACGAGTTCTCCACGTTCGGGGCGCGCAAGGAGGAGAAGGAAGACTAG

Related Sequences

XP_004873331.1 Protein

Cherp PREDICTED: calcium homeostasis endoplasmic reticulum protein isoform X4 [Heterocephalus glaber]

Length: 920 aa      View alignments
>XP_004873331.1
MEMPLPPDDQELRNVIDKLAQFVARNGPEFEKMTMEKQKDNPKFSFLFGGEFYSYYKCKLALEQQQLICKQQAPELEPPATLPPLPQPPLAPAAPVPPAQGTPSVDELIQQSQWNLQQQEQHLLALRQEQVTAAVAHAVEQQMQKLLEETQLDMNEFDNLLQPIIDTCTKDAISAGKNWMFSNAKSPPHCELMAGHLRNRITADGAHFELRLHLIYLINDVLHHCQRKQARELLAALQKVVVPIYCTSFLAVEEDKQQKIARLLQLWEKNGYFDDSIIQQLQSPALGLGQYQATLVSEYSSVVQPVQLAFQQQIQTLKTQHEEFVSSLAQQQQQQQVQMPQLEPEVKATPPPPAPAPPPAPTPTPAIPPTTQPDDSKPPIQMPSSSEYDTAGAVQDPAAAGPRGPGPHDQIPPTKPPWFDQPHPVAPWGQQQPPEQPPYPHHQGGPPHCPPWSNSHEGMWGEQRGEPGWSGQRDAPWNSQPDPNWNSQFEGPWNSQHEQPPWGAGQREPPFRMQRPPHFRGPFPPHQQHPQFGQPPHPHNFNRFPPRFMQDDFPPRHPFERPPYPHRFDYPQGDFPAEMGPPHHHPGHRMPHPGINEHPPWAGPQHPDFGPPPHGFNGQPPHMRRQGPPHINHDDPSLVPNVPYFDLPAGLMAPLVKLEDHEYKPLDPKDIRLPPPMPPSERLLAAVEAFYSPPSHDRPRNSEGWEQNGLYEFFRAKMRARRRKGQEKRNRSRSRSKSRGRSSSRSNSRSSKSSASYSRSRSRSCSRSYSRSRSRSRSRSRSSRSRSRSRSRSRSKSYSPGRRRRSRSRSPTPPSSAGLGSNSAPPIPDSRLGEENKGHQMLVKMGWSGSGGLGAKEQGIQDPIKGGDVRDKWDQYKGVGVALDDPYENYRRNKSYSFIARMKARDEFSTFGARKEEKED