Sequence details NCBI ID: XM_004873266.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol unclassified transcription discrepancy
Gene Name mRNA
Entrez Gene ID 101698263

Database interlinks

Part of NW_004624908.1 (Scaffold)

For more information consult the page for NW_004624908.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

NWD1 ENSCPOG00000024668 (Guinea pig)

Gene Details

NACHT and WD repeat domain containing 1

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000020000, Guinea pig)

Protein Percentage 79.25%
CDS Percentage 82.24%
Ka/Ks Ratio 0.14915 (Ka = 0.12, Ks = 0.8045)

NWD1 ENSG00000188039 (Human)

Gene Details

NACHT and WD repeat domain containing 1

External Links

Gene Match (Ensembl Protein ID: ENSP00000428579, Human)

Protein Percentage 68.72%
CDS Percentage 73.66%
Ka/Ks Ratio 0.12144 (Ka = 0.2024, Ks = 1.6667)

Nwd1 ENSMUSG00000048148 (Mouse)

Gene Details

NACHT and WD repeat domain containing 1

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000124804, Mouse)

Protein Percentage 67.61%
CDS Percentage 71.03%
Ka/Ks Ratio 0.10058 (Ka = 0.215, Ks = 2.1375)

Nwd1 ENSRNOG00000050639 (Rat)

Gene Details

NACHT and WD repeat domain containing 1

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000064974, Rat)

Protein Percentage 63.54%
CDS Percentage 69.26%
Ka/Ks Ratio 0.11653 (Ka = 0.2566, Ks = 2.2017)

Genome Location

Sequence Coding sequence

Length: 4680 bp    Location: 828349..798610   Strand: -
Raw sequence   
>XM_004873266.1
ATGCGGAGAGGGAGGCCCTGCTGGGGACCGCCTGCCCCGAGCTGCNTGACCTTCTGCCGGAACCAAGGCCTGCCCTTCGAGGCCGTGGACCTGCGGTGGGGTGTCCAGGACTCCGAGGCTGCTGACCAGCTGACCCCCGACCTGTGCCTGGAGGAGCTGCAGCGCTGCCAGAGGACGTCCCTGGGGCCAGCCTTCGTCGCCCTCGTGGGTGACCAGTACGGCCCCTGTCCGGTCCCCCGGCGCATCGAGGAGAAGGAGTGGGAGGCGCTGCGGGCCCAGCTGAGCACCAGGCCGGGGGACCTGGAGCTGGTGGCCCAGCGCTTCCGGAGGGACGAGAACTCGGTTCCCCCCAGCTACGTGCTGCAGGCGGCGGGCGGCGGGGAAGCCCCCGGGCCGGAGGAGCCCACGCTGGCCTCGGTTCTGCGCGCCGCAGCCCAGGAGGCCCGGGGCCGGGGCCTCATCAGCCAGGAGCAGTGGCAGCGCTACCACCGCTCAGTGCTGGAGTGGGAGCTGGAGCGCGGCCTGCTGAGCGGCTCTCCGGGGGCCACTGTGTTCCTGCGTGAGATCCCGGAGCTGGCGCGGCACCTGCTGCAGGACTGTGCGCTCCCCGTGGTGGACCGGCTGCCCGACGGCCTCGTGGACACCACCGCACAGGGCCACCTGAGCAGCCTCAAGCAGCGAATGGCCCAGGAGTGGCCCGGGGTGCTCAAGGTGCACCGGCTGCCCTGGGCCCGCGACCTGGTGAATCCCAGGAACAAGGCGCATGCGCGCTACCTGCTCGAGCTGGGCGAGCAGTTCGTGGCCAGCGCTGCGCATCAGGTCCTGCAGCGCCTCCGGGAGCTACCGCCCGCCCTGCCCTCCCCCGCCTGGCTCTTCCAGGACATCCGCCACCACCTGTGGCAGGGCACCGAGGCCACCCGGGCCTTCTGCGGCCGCCAGGGGCTCCTGGGCCGGCTCGGCCAGCGGCTGCGGCAGGATGACGGCTGTCCTCACAGCCCCCTGGTGCTCTTCGGCCCCCCGGGCATCGGGAAGACCGCCGTGCTGTGCAAGCTGGCCGAGCAGGCAGCCGGGCTGCTGGGCCGTAAGACGGTGACAGTGCTGAGACTGCTGGGGACGTCGCAGGGCAGCGCAGACGCCCGCGGGCTCCTGGCCGGCCTGTGTCTGCAGCTGTGCCTGGCCTTCGGGCTGCCCGCGCCACCGCCCCAGGTCCTGCAGGCCCGCACCAGGTTGGCCCATTTCTTCCACGTGCTGCTCCACACCGTGGCCCGCAGGGACTTTGAGTCCCTGGTCATCCTGCTGGACGCTGTGGATGACCTGGACCCCGGCCGGCGCTCCGGGGCCATCCCCTGGCTGCCCCTTGCCTGCCCCCCGCGGGTCCACCTCATTCTGTCTGCCTGCTCCGGGCCATGCGGCGCCTTGCACGCTGTGCGGGCGACACTCAGGGACTCGGACGCCTATTGGGAGGTGGAGCCGCTCTCTGAAGACCAGGCCCAGGAGATGGTGCAGCTCCTGCTGGCTGCGGCGGGGCGCACACTGAGCCCAGCCCAGCGCAACCTGCTGTGGGCCAGCCTGCCCGAGGCCGGAAACCCTGGGCGCCTGCAGCTGGCATTCCACGAGGCCCACACCTGGGCCTCTTTCTCTGTGCCCGTGCCCCTGGCCACCACCGCGGAGGAGGCGACACACCAGCTCTGCGCCCGCCTGGAGCTGACACACAGCTGGCTTCTGGTGGCCCACGTGCTGGGCTACATCGAAGCTTCCCGGCATGGGCTGGCAGAGGCGGAGCTGAAGGACGTGCTGTCGCTGGATGACGAGGTGCTGCAGGCCGCCTACCGGGCCTGGACGCCGCCCAGCCGGGAGCTGCTGCGCTTCCCTCCCCTGCTGTGGGTGCGGCTGCGCAGGGACCTGGACCACTGCTTGTCCCGGCGGCCCATGCACGGCACCACACTGCTGGCCATCGCCCACAGGCAGCTGGCCCAGGTGGTCCGAGAGCGCTACCTGTCCCCACCTGAGGCGGCCGCGAGGCACAGCGTCCTGGCCGACTTCTTCGCGGGCACCTGGAGCCAAGGGACCAAGAAACTCATCACTCTGCCGCGTGTGGGGGGGCCGCTGAGCCTGGACCGGAAGGTGGCCCCACAGCCCCTGTGGTTCTCAGACTCCGTTGCCAATGAGCGGAAGCTGGCGGAGCTGCCCCTCCACCTGCTGCATGCCGGGCGCACCAGGGAGCTGCTGCAGGATGTGCTGGGTGACATGAGCTGGCTGTCCTGCCGGCTGCTGTCTGGTGGCCTCGATGCCCTGCTGGACGATGTGGACCTGTGTGTGCCCCACGTGGACAGCCCGGAGCTGGGCCTGCTGCGTGAGGCCCTCGAGCTCTGCCGCCCAGCCCTCGAGCTCCGGGGCACAGAGAGAAGTGTGCTGTATGTGGAGCTGCTGGCCCGGCTGCAGGCCTTTGCCGCCTCGTGCCCTGTGCTGCTGGGGCCGCTGAGTCAGCAGGCCCAGGCCTGGCTCCGCGCATGCCCGCACCCTGTGCTGGTGCCGCTGGCCCCGTGTCTGCAGCCCCCGGGGGGGCCCCTGTGCACCTCCCTCACCGGCTGTCACAGAGGTGTCACCGCCCTGGCGTGGAGCCCGCAGGAGCGGCTGCTGGTGGTGGGCGCCCAGGACGGCATGGTGACCGTGTGGGACGTGGAGGAGGCACGCGTGACCCACATCCTCACAGGACACGCAGGAGAGGTGACCTGCCTGGCTGTGCTTGCCCGGGAAGCGCTGGCCGTCTCCGCCTCCAGGGACCGCACGCTGTGCCTGTGGCACCTGCTGTCCGGCCGGGAGAGGTTCACCCTGCGGGACACAGGCACCCCGGACCCCCAGACCTGCCGCCTCCACCTGGACGAGGCTCAGGGCGTGGTGTACGCAGCCTGGAGCTCACAGATCAGTGCTTGGAACCTGCAGACCGCGGAGCTGCTTTTCCGCATCCTTGGCGACGTCTCTGACCCCTGGGTGTACACAGCTGTGCTGGTGTCCCAGGCCCAGTTGTTGACCTTGTCCAAGGGCGGTGCCATCAGTGTGAGGAGCTCAGCCACTGGACAGCTGCAGGGGACACGGCCCCTGTCCAGCACACCAGAGGAGACCCCGTCCTGTGCAGTCCTGGTCCAGAAACAAGGAAGGCTGATCGCAGGGTTCAGCAGCGGCTCCATTGCTGTGGTTTCCCCGGATGGAGACCATGGGGACCAGCAGCTGGAGAGGCTCCCGGAAGCAGTGTGTTTCCTGGTGCTGGCGGAAGACGAGTCCCTTCTGGCAGCAGGCTTTGGGAGATGCGTGCGGACATTTCTGGCCGACTCACAGGCCTTCCGCCAATTTCTGGCCACCGACTTGGAGCATGAGGACACGGTGGAGACGTCAGTGTTCGGGCCCCAGAACAATCTGATTGTCACCGGGTCCAGAGATGCGCTCGTTCAGGTGTGGAGCCTGTCTGAGCAGGGGACCCTGCTGCACGTCCTCGAGGGCGTGGGCGGCCCCGGGAGCCTGCTGGCCCGGGCCGGGGCCCTGGTGGCGTGCGCATCCCAGCAGTCCTCCTCCCTCAGGGTCTGGGACCTCAGCTCCCCGCAGCGGCCGCAGCCCCCCGCGCCCTTCCCAGACCGCGCGGGCCTCGTCGCCCTGTCCCACCACGGGAGCTTCGTCTACTTCCCCAAGGTCGGAGACAAACACAAAGTCACCGTCTGGGACGTGGCCGAAGGTGAGGTACAGGACACCCTGGACGCGTCCAGTGAGGTCCGGTGCCTGGAAGTGGCCGAGGGGCCCAAACTCCTGTTTGCGGGGCTGTCGTCGGGGGCTGTGCTGGTGTTCCCGCTGGACTCGAGGCAGGATGTGCTGTGTGTGCCCCCGCCCGAGGCCCGCAAGCCAGTCGTGTGCATGGCCCTGAGCAAGCTCGAGGACCGGCTGGCCATCGCCTACGACAACACCGTGCTGGTGCTGGACGTGGAGCCCGGGGACCCGTGCCCAGCCATCGAGGGGCCTGCATACACCTTCTACACGCAGCTGCCCGAGACCATCGCCAGCGTGGCCGTGCTGGGTGACCACCGTGTGCTCTATGGCATGACCAGCGGTGACCTCTTCCTGTACGCATGTTCCGACTCCCAAGTGTTCCCGCTCGAGGCCCACAGCAGCCGAGTGACCTGCGTGGATGTCAGCCACAGCGAGCAGCTGGCAGTCAGCGGGTCCCAGGAGGGCCGCCTATGTCTCTGGGACGTGGGCACGTGTGCGTGCAGGCTGGAGCTGGGCTACACGAGCTCCTACTGCCCCGGGGTGCGATGCGTCTGCTTCTCGAAGGATGACAAATACGTGTTCTCAGGCTTGCAGGACCGCTCCGTCATCGTCTGGAGCGCAGTGGACGGGACGCTACTGGCCACCCAGTTTGTCCACGCAGTGGTGACCAGAATCATCCCCACTTCTAATGGCTTCATTGCCCCCACAAGCCATGGCTACATCCTCCGGAATCGGTTCCAGTGCCCAGCCTCCAGGGCCTCACAGCAAGACCCCCTCAGGAACTTCCAGAAGGCGGTGTGGAGGGTCAAATGGAGGCAGAGGGAGGAGCTGGCAGCGGGAGCCCCCCAGGACTCGGAGTCAGAGGCGGCCCAGGGAAGGGAGGCCAAGCACAACAAGCGCTCTCAGGTCTGCCGGATTGTGTGA

Related Sequences

XP_004873323.1 Protein

unclassified transcription discrepancy PREDICTED: LOW QUALITY PROTEIN: NACHT and WD repeat domain-containing protein 1 [Heterocephalus glaber]

Length: 1559 aa      View alignments
>XP_004873323.1
MRRGRPCWGPPAPSCXTFCRNQGLPFEAVDLRWGVQDSEAADQLTPDLCLEELQRCQRTSLGPAFVALVGDQYGPCPVPRRIEEKEWEALRAQLSTRPGDLELVAQRFRRDENSVPPSYVLQAAGGGEAPGPEEPTLASVLRAAAQEARGRGLISQEQWQRYHRSVLEWELERGLLSGSPGATVFLREIPELARHLLQDCALPVVDRLPDGLVDTTAQGHLSSLKQRMAQEWPGVLKVHRLPWARDLVNPRNKAHARYLLELGEQFVASAAHQVLQRLRELPPALPSPAWLFQDIRHHLWQGTEATRAFCGRQGLLGRLGQRLRQDDGCPHSPLVLFGPPGIGKTAVLCKLAEQAAGLLGRKTVTVLRLLGTSQGSADARGLLAGLCLQLCLAFGLPAPPPQVLQARTRLAHFFHVLLHTVARRDFESLVILLDAVDDLDPGRRSGAIPWLPLACPPRVHLILSACSGPCGALHAVRATLRDSDAYWEVEPLSEDQAQEMVQLLLAAAGRTLSPAQRNLLWASLPEAGNPGRLQLAFHEAHTWASFSVPVPLATTAEEATHQLCARLELTHSWLLVAHVLGYIEASRHGLAEAELKDVLSLDDEVLQAAYRAWTPPSRELLRFPPLLWVRLRRDLDHCLSRRPMHGTTLLAIAHRQLAQVVRERYLSPPEAAARHSVLADFFAGTWSQGTKKLITLPRVGGPLSLDRKVAPQPLWFSDSVANERKLAELPLHLLHAGRTRELLQDVLGDMSWLSCRLLSGGLDALLDDVDLCVPHVDSPELGLLREALELCRPALELRGTERSVLYVELLARLQAFAASCPVLLGPLSQQAQAWLRACPHPVLVPLAPCLQPPGGPLCTSLTGCHRGVTALAWSPQERLLVVGAQDGMVTVWDVEEARVTHILTGHAGEVTCLAVLAREALAVSASRDRTLCLWHLLSGRERFTLRDTGTPDPQTCRLHLDEAQGVVYAAWSSQISAWNLQTAELLFRILGDVSDPWVYTAVLVSQAQLLTLSKGGAISVRSSATGQLQGTRPLSSTPEETPSCAVLVQKQGRLIAGFSSGSIAVVSPDGDHGDQQLERLPEAVCFLVLAEDESLLAAGFGRCVRTFLADSQAFRQFLATDLEHEDTVETSVFGPQNNLIVTGSRDALVQVWSLSEQGTLLHVLEGVGGPGSLLARAGALVACASQQSSSLRVWDLSSPQRPQPPAPFPDRAGLVALSHHGSFVYFPKVGDKHKVTVWDVAEGEVQDTLDASSEVRCLEVAEGPKLLFAGLSSGAVLVFPLDSRQDVLCVPPPEARKPVVCMALSKLEDRLAIAYDNTVLVLDVEPGDPCPAIEGPAYTFYTQLPETIASVAVLGDHRVLYGMTSGDLFLYACSDSQVFPLEAHSSRVTCVDVSHSEQLAVSGSQEGRLCLWDVGTCACRLELGYTSSYCPGVRCVCFSKDDKYVFSGLQDRSVIVWSAVDGTLLATQFVHAVVTRIIPTSNGFIAPTSHGYILRNRFQCPASRASQQDPLRNFQKAVWRVKWRQREELAAGAPQDSESEAAQGREAKHNKRSQVCRIV