Details from NCBI annotation

Gene Symbol Colgalt1
Gene Name collagen beta(1-O)galactosyltransferase 1
Entrez Gene ID 101711193

Database interlinks

Part of NW_004624908.1 (Scaffold)

For more information consult the page for NW_004624908.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

COLGALT1 ENSCPOG00000011059 (Guinea pig)

Gene Details

collagen beta(1-O)galactosyltransferase 1

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000009941, Guinea pig)

Protein Percentage 91.52%
CDS Percentage 88.8%
Ka/Ks Ratio 0.02205 (Ka = 0.0355, Ks = 1.611)

COLGALT1 ENSG00000130309 (Human)

Gene Details

collagen beta(1-O)galactosyltransferase 1

External Links

Gene Match (Ensembl Protein ID: ENSP00000252599, Human)

Protein Percentage 90.18%
CDS Percentage 87.44%
Ka/Ks Ratio 0.03385 (Ka = 0.0445, Ks = 1.3137)

Colgalt1 ENSMUSG00000034807 (Mouse)

Gene Details

collagen beta(1-O)galactosyltransferase 1

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000047923, Mouse)

Protein Percentage 88.17%
CDS Percentage 82.87%
Ka/Ks Ratio 0.03421 (Ka = 0.0636, Ks = 1.8599)

Colgalt1 ENSRNOG00000023317 (Rat)

Gene Details

collagen beta(1-O)galactosyltransferase 1 (Colgalt1), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000024866, Rat)

Protein Percentage 88.49%
CDS Percentage 82.28%
Ka/Ks Ratio 0.03243 (Ka = 0.0633, Ks = 1.9533)

Genome Location

Sequence Coding sequence

Length: 1884 bp    Location: 509832..499236   Strand: -
>XM_004873208.1
ATGGCGGCGGCCCCACGCACAAGTCGGCGGCGCGGGCGGCCGCTCTCCGGGCCGCTGCCGCTGCTGCTGCCGCTTCTGCTGCTGCTGGCGCCGTCCCCGGGGCCCCCGCCGGGCGCCGCCGCCTACTTCCCCGAGGAGCGCTGGAGCCCCGAGTCCCCGCTGCAGGCTCCGCGCGTGCTCGTCGCGCTGCTGGCGCGCAACGCGGCCCACGCGCTGCCCGCCACGCTGGGGGCCCTGGAGCGGCTGCGCCACCCGCGCGAGCGCACGGCGCTGTGGGTGGCCACGGACCACAACGCGGACAACACCTCTGCCGTGCTGCGGGAGTGGCTGGTGGCCGTGAAGGGCCTGTACCATTCCGTGGAGTGGCGGCCGGCGGAAGAGCCCAGGTCCTACCCCGACGAGGAGGGCCCCAAGCACTGGTCCGACGCCCGCTATGAGCATGTCATGAAACTCCGCCAGGCCGCCCTGAAGGCAGCACGGGACATGTGGGCGGACTACATCCTGTTTGTGGATGCCGACAACCTCCTGCTGAACCCTGACACGCTGAGCCTGCTCATCGCGGAGAACCGGACGGTGGTGGCGCCCATGCTGGACTCGCGGGCGGCCTACTCCAACTTCTGGTGCGGCATGACGCCCCAGGGCTACTACAGGCGCACGCCGGCCTACATCCCCATCCGCAAGCGGGAGCGCCAGGGCTGCTTCGCCGTCCCCATGGTGCATTCCACCTTCCTGCTGGACCTGCGCAAGGCGGCGTCCCGGAGCCTGGCCTTCTACCCACCCCACCCCGACTACACGTGGGCCTTCGACGACATCATCGTCTTCGCCTTCTCCTGCAAGCAGGCCGGGGTGCAGATGTACGTGTGCAACAAGCAGGTGTATGGCTTCCTGCCGGTGCCGCTGCGGGTGCACAGCTCGCTGCAGGATGAGGCCGAGAGCTTCCTGCACGTCCAGCTGGAGGTGATGGTGAAGCATCCGCCCGTGGAGACCTCGCGCTTCATCCCAGCACCCACCAGGACTCCCGACAAGATGGGCTTCGACGAGGTCTTCCTGATCAACCTGAGGCGGCGCCAGGACCGGCGGGCGCGCATGCTGCGGGCGCTGCGGGAGCAGGGGATCGTGGCCCGGCTGGTAGAGGCCGTGGATGGCAAGGCCATGAACAGCAGCCAGGTGGAGGCGCTGGGCGTCCAGATGCTGCCTGGCTACCGGGACCCCTACCACGGCCGGCCGCTCACCAAGGGCGAGCTGGGCTGCTTCCTGAGCCACTTCCGCATCTGGACGGAGATCGTGGACCGGGGGCTGCAGAAGTCGCTGGTGTTCGAGGATGACCTGCGCTTTGAGGTCTTCTTCAAGAGGCGCTTGATGAATCTCATGCAGGACGTGGAGCAGGAGGGCCTGGACTGGGACCTCATCTACGTGGGCCGGAAGCGGATGCAGGTGGAGCACCCCGAGAAGGCCGTGCCCCGCGTGCGGAACCTGGTGGAGGCCGACTACTCCTACTGGACGTTGGCCTACGCGATGTCCCTGCAAGGCGCCCGCAAGCTGCTGGCGGCCGAGCCACTGGCCAAGATGCTGCCGGTCGACGAGTTCCTGCCGGTCATGTTCGACAAGCACCCGGTCTCCGAATACAGGGCGCACTTCTCGCCCCGGGACCTGCGCGCCTTCTCCGTGGAGCCCCTGCTCATCTACCCCACGCACTACACGGGGGACGACGGCTACGTGAGCGACACGGAGACCTCAGTGGTGTGGAACAACGAGCGCGTGAAGACGGACTGGGACCGCGCCAAGTCCCAGAAGATGCGGCGGCAGCAGGCGCTGAGCCGCGAGGCCGAGAACGCGGACGTGCTGCAGTCCCCGCTGGACAGCGCCGCGCGGGACGAGCTCTGA

Related Sequences

XP_004873265.1 Protein

Colgalt1 PREDICTED: procollagen galactosyltransferase 1 [Heterocephalus glaber]

Length: 627 aa      View alignments
>XP_004873265.1
MAAAPRTSRRRGRPLSGPLPLLLPLLLLLAPSPGPPPGAAAYFPEERWSPESPLQAPRVLVALLARNAAHALPATLGALERLRHPRERTALWVATDHNADNTSAVLREWLVAVKGLYHSVEWRPAEEPRSYPDEEGPKHWSDARYEHVMKLRQAALKAARDMWADYILFVDADNLLLNPDTLSLLIAENRTVVAPMLDSRAAYSNFWCGMTPQGYYRRTPAYIPIRKRERQGCFAVPMVHSTFLLDLRKAASRSLAFYPPHPDYTWAFDDIIVFAFSCKQAGVQMYVCNKQVYGFLPVPLRVHSSLQDEAESFLHVQLEVMVKHPPVETSRFIPAPTRTPDKMGFDEVFLINLRRRQDRRARMLRALREQGIVARLVEAVDGKAMNSSQVEALGVQMLPGYRDPYHGRPLTKGELGCFLSHFRIWTEIVDRGLQKSLVFEDDLRFEVFFKRRLMNLMQDVEQEGLDWDLIYVGRKRMQVEHPEKAVPRVRNLVEADYSYWTLAYAMSLQGARKLLAAEPLAKMLPVDEFLPVMFDKHPVSEYRAHFSPRDLRAFSVEPLLIYPTHYTGDDGYVSDTETSVVWNNERVKTDWDRAKSQKMRRQQALSREAENADVLQSPLDSAARDEL