Details from NCBI annotation

Gene Symbol Ercc1
Gene Name excision repair cross-complementing rodent repair deficiency, complementation group 1 (includes overlapping antisense sequence), transcript variant X4
Entrez Gene ID 101699727

This gene is present in the GenAge database and has been identified as potentially important to ageing in humans.

Database interlinks

Part of NW_004624907.1 (Scaffold)

For more information consult the page for NW_004624907.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

ERCC1 ENSCPOG00000015606 (Guinea pig)

Gene Details

excision repair cross-complementing rodent repair deficiency, complementation group 1 (includes overlapping antisense sequence)

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000014074, Guinea pig)

Protein Percentage 92.57%
CDS Percentage 90.88%
Ka/Ks Ratio 0.09908 (Ka = 0.0358, Ks = 0.3614)

ERCC1 ENSG00000012061 (Human)

Gene Details

excision repair cross-complementing rodent repair deficiency, complementation group 1 (includes overlapping antisense sequence)

External Links

Gene Match (Ensembl Protein ID: ENSP00000013807, Human)

Protein Percentage 87.54%
CDS Percentage 83.84%
Ka/Ks Ratio 0.10447 (Ka = 0.078, Ks = 0.7466)

Ercc1 ENSMUSG00000003549 (Mouse)

Gene Details

excision repair cross-complementing rodent repair deficiency, complementation group 1

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000003645, Mouse)

Protein Percentage 85.19%
CDS Percentage 82.6%
Ka/Ks Ratio 0.09484 (Ka = 0.0798, Ks = 0.8411)

Ercc1 ENSRNOG00000017839 (Rat)

Gene Details

excision repair cross-complementing rodent repair deficiency, complementation group 1 (Ercc1), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000024113, Rat)

Protein Percentage 82.83%
CDS Percentage 82.27%
Ka/Ks Ratio 0.11707 (Ka = 0.092, Ks = 0.7854)

Genome Location

Sequence Coding sequence

Length: 894 bp    Location: 2298578..2288384   Strand: -
>XM_004873187.1
ATGGACCCTGAGAAGGACGAGGAGGGGGCGCCGCAGCCTGCAGGGCCGCCCTCGAGGAAGAAGTTTGTCATCCCGTTGGACGAGGATGAAGTGCCTCCTCCGGGGGCCAAGCCCTTATTCAAATCCACGGGAAACCTTCCCACCATGGAGACCTCAGCCCAGGGCGCCCAGCAGACCTATGCTGAGTACGCTATTTCCCAGCCTGCAGGAGGGGCGGCAGCCACATGCCCCACGGGGTCAGATTCCTTGGCAGGAGAGACCCCCAACCAGGCCCTGAAACCAGGGGCCAAATCCAACAGCATCATCGTGAGCCCCCGGCAGAGGGGCAACCCTGTGCTGAAGTTTGTGCGCAACGTGCCCTGGGAGTTTGGTGAAGTGATCCCTGACTACGTGCTGGGCCAGAGCACCTGTGCCCTCTTCCTCAGCCTCCGCTACCACAACCTGCACCCCGACTACATCCACGAGCGGCTGCAGAGCCTGGGGAAGAACTTCGCCCTGCGCGTTCTGCTGGTCCAGGTGGATGTGAAAGACCCTCAGCAGGCCCTCAAGGAGCTGGCTAAGATGTGCATCCTGGCTGATTGCACACTGATCCTTGCATGGAGTCCCGAGGAGGCCGGGCGGTACCTGGAGACCTACAAGGCCTACGAGCAGAAGCCAGCGGACCTCCTGATGGAGAAGCTGGAGCACAACTTCGTGTCCCGGGTCACTGAATGTCTGAGCTCCGTGAAGTCAGTCAACAAGACAGACAGTCAGACCCTCCTGTCCACTTTTGGGTCTCTGGAACAGCTCATGGCAGCATCACGGGAAGATCTGGCCTTATGCCCTGGCCTGGGCCCCCAGAAGGCCCGGAGGCTGTTTGACGTCCTGCATGAGCCCTTTCTCAAGGTGCCCTGA

Related Sequences

XP_004873244.1 Protein

Ercc1 PREDICTED: DNA excision repair protein ERCC-1 isoform X4 [Heterocephalus glaber]

Length: 297 aa      View alignments
>XP_004873244.1
MDPEKDEEGAPQPAGPPSRKKFVIPLDEDEVPPPGAKPLFKSTGNLPTMETSAQGAQQTYAEYAISQPAGGAAATCPTGSDSLAGETPNQALKPGAKSNSIIVSPRQRGNPVLKFVRNVPWEFGEVIPDYVLGQSTCALFLSLRYHNLHPDYIHERLQSLGKNFALRVLLVQVDVKDPQQALKELAKMCILADCTLILAWSPEEAGRYLETYKAYEQKPADLLMEKLEHNFVSRVTECLSSVKSVNKTDSQTLLSTFGSLEQLMAASREDLALCPGLGPQKARRLFDVLHEPFLKVP