Sequence details NCBI ID: XM_004873183.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Ppp1r13l
Gene Name protein phosphatase 1, regulatory subunit 13 like
Entrez Gene ID 101699368

Database interlinks

Part of NW_004624907.1 (Scaffold)

For more information consult the page for NW_004624907.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

PPP1R13L ENSCPOG00000015602 (Guinea pig)

Gene Details

protein phosphatase 1, regulatory subunit 13 like

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000014070, Guinea pig)

Protein Percentage 84.51%
CDS Percentage 83.44%
Ka/Ks Ratio 0.16095 (Ka = 0.0993, Ks = 0.617)

PPP1R13L ENSG00000104881 (Human)

Gene Details

protein phosphatase 1, regulatory subunit 13 like

External Links

Gene Match (Ensembl Protein ID: ENSP00000403902, Human)

Protein Percentage 90.31%
CDS Percentage 87.21%
Ka/Ks Ratio 0.0696 (Ka = 0.0458, Ks = 0.6581)

Ppp1r13l ENSMUSG00000040734 (Mouse)

Gene Details

protein phosphatase 1, regulatory (inhibitor) subunit 13 like

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000047839, Mouse)

Protein Percentage 90.16%
CDS Percentage 83.43%
Ka/Ks Ratio 0.05631 (Ka = 0.0548, Ks = 0.9738)

Ppp1r13l ENSRNOG00000025350 (Rat)

Gene Details

Protein Ppp1r13l

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000050977, Rat)

Protein Percentage 89.28%
CDS Percentage 83.48%
Ka/Ks Ratio 0.06333 (Ka = 0.0582, Ks = 0.9183)

Genome Location

Sequence Coding sequence

Length: 2484 bp    Location: 2286184..2269815   Strand: -
Raw sequence   
>XM_004873183.1
ATGGACAGCGAGGCTTTCCAGAGCGCGCGGGACCTCCTGGACTTGAACTTCCAGTCGCTGGCCATGAAGCACATGGACCTGAAGCAGATGGAGCTGGATACCGCGGCCGCCAAGGTGGACGAATTGACCAAGCAGCTGGAGTCGCTGTGGTCAGAATCACCAACGCCTCCTGGCTCGCAGGCCGGAGCCCCCGTTAGGCAATCCCGGTACAGCTCCAGCCCCGTCCCCGAATCCTTCGGCAGCAGAGGCTCCCCACGAAAGGCGGCCACGGACAGCTCAGACTCCCCTTTCGGACGCTCCGAGAGTGGCCCGGCCCTGCATCCGTACAGCCCACTGTCACCCAAGGGCCGGCCGTCCTCGCCGCGCACCCCACTCTACCTGCAGCCCGAGGCCTACAGCAGCCTGGACCGCGCGCCCTCGCCCCGGCCCCGGGCCTTCGATGGGGCTGGCAGCCCCCTGGGCCGTGCACCCTCCCCACGGCCGGGGTCCGGCCCTCTCCGCCAGCAAGGTTCCCCTGCGACCTTCGACTTCCTGAGCCGCGCAGGCTCCCCACGCGGTAGCCCTCTGGCCGAGGGACCTCAAACCTTCTTCCCCGAGCGCGGACCCTCGCCACGCCCTCCTGCCTCAGCCTATGACGCGCCTGCTTTCGGGAGCCCCCTGCTGGGCGCGGGCGGCAGTGCCTTTGCCCCACCTCTGCGCGCGCATGATGACCTGACGCTCCGCCGGCGCCCCCTTAAAGCCTGGAACGAGTCTGACCTGGACGTGGCCTACGAGAAGAAATCTTCACAGGCAGCGAGCTACGAACGCCTGGACATCTTCGCGCGGCCTGCCTCGCCGGGCCTGCAGCTGCTGCCCTGGAGAGAGAGCAGCCTGGATGGGCTGGGGGCCTCAGGCAAGGACAATCTCACCAGCGCCACCTTGCCCCGAAATTACAAGGTCTCGCCTCTGGCCAACGACAGGCGCTCAGATGTGGGCAGCTACCGACGCTCACTGGGCTCCGCCGCGGGGCCATCGGGCACCCTGCCCCGCAGCTGGCAGCCAGTCAGCCGCATCCCCATGCCTCCCGCCAGCCCGCAGCCCCGTGGGGCCCCGCGCCAGCGCCCCATCCCCCTCAGCATGATATTCAAGCTGCAGAATGCCTTCTGGGAGCACGGGGCCAGCAGGGCCATGCTGCCCGGGTCCCCCGTCTTCTCCAGAGCACCCCCACCTAAGCTGCCTCCCCAGCCCCAGCCCCAGCCCCAACCTCAGCCCCAGCCCCAGCCCCAGCCCCAGCCCCAGCCCCAGCCCCAGGCTCAACCACCCACGCCAGTTGCCCAGCCCCCCCAACAGACATGGGCCCCTGTGAACGAAGGCCTCCTTAAATCTCCCGCTGAGCTGGAGCCAGAGCCAGAACTTGAAGTGCTGCTGACCCCGGTGCTGGAGGCTGGCGACACAGATGAAGGCACTGTCACTCGACCCCTTAGTCCCACGAGGCTGCAGCCAGCACTGCCACCCGAGGCACAGTCAGTGCCTGAGCTGGAGGAGGTGGCGCGAGTGCTGGCAGAGATCCCTCGGCCCCTGAAACGCAGGGGCTCCATGGAGCAGAGCCCTGCCGTGGCCCTGCCCCCCACCCACAAGAAGCAGTACCAGCAGATCATCAGCCGCCTCTTCCACCGGCACGGCGGGCCAGGGCCTGGGGGGCCTGAGGCAGAGCTTTGCCCCATTACTGAGGGATCCGAGGCCAGGGCAGGGCCCCCTGCTCCCGCCCCACCGGCCCCCATACCACCCCCAGCCCCACCCCAGAGCAGCCCGCCGGAGCAGCCCCAGAGCATGGAGATGCGTTCTGTGCTGCGGAAGGTGGGCTCCCCTCGAAAGGCTCGGCGCGCGCGCCTCAACCCACTGGTGCTGCTGCTGGACGCAGCGCTGACGGGGGAGCTGGAGGTGGTGCAGCAGGCCGTGAAGGAGATGAACGACCCAAGCCAGCCCAATGAGGAGGGCATCACCGCCCTGCATAACGCCATCTGCGGTGCCAACTACACCATTGTCGACTTCCTCATCGCTGCTGGCGCCAATGTCAACTCCCCGGACAGCCACGGCTGGACACCGTTGCACTGCGCGGCATCGTGCAACGACACAGCCATCTGCATGGCGCTGGTACAGCACGGCGCGGCCATCTTCGCCACAACTGTCAGCGATGGCGCCACTGCCATCGAGAAGTGCGACCCCTACCGGGAGGGCTACGCAGACTGCGCCACCTACCTGGCAGACGTGGAGCACAGCATGGGGCTGATGCACAGCGGGGCAGTGTATGCACTCTGGGACTACAGCGCCGAGTTCGGGGATGAGCTGTCCTTCCGCGAGGGCGACTCGGTCACTGTGCTGCGGAGGGACGGGCTGGAGGAGACCGACTGGTGGTGGGCAGCGCTGCACGGCCAGGAGGGCTACGTGCCGCGGAACTACTTCGGGCTCTTCCCCAGGGTGAAGTCGCAGAGGAATAAAGTCTAG

Related Sequences

XP_004873240.1 Protein

Ppp1r13l PREDICTED: relA-associated inhibitor [Heterocephalus glaber]

Length: 827 aa      View alignments
>XP_004873240.1
MDSEAFQSARDLLDLNFQSLAMKHMDLKQMELDTAAAKVDELTKQLESLWSESPTPPGSQAGAPVRQSRYSSSPVPESFGSRGSPRKAATDSSDSPFGRSESGPALHPYSPLSPKGRPSSPRTPLYLQPEAYSSLDRAPSPRPRAFDGAGSPLGRAPSPRPGSGPLRQQGSPATFDFLSRAGSPRGSPLAEGPQTFFPERGPSPRPPASAYDAPAFGSPLLGAGGSAFAPPLRAHDDLTLRRRPLKAWNESDLDVAYEKKSSQAASYERLDIFARPASPGLQLLPWRESSLDGLGASGKDNLTSATLPRNYKVSPLANDRRSDVGSYRRSLGSAAGPSGTLPRSWQPVSRIPMPPASPQPRGAPRQRPIPLSMIFKLQNAFWEHGASRAMLPGSPVFSRAPPPKLPPQPQPQPQPQPQPQPQPQPQPQPQAQPPTPVAQPPQQTWAPVNEGLLKSPAELEPEPELEVLLTPVLEAGDTDEGTVTRPLSPTRLQPALPPEAQSVPELEEVARVLAEIPRPLKRRGSMEQSPAVALPPTHKKQYQQIISRLFHRHGGPGPGGPEAELCPITEGSEARAGPPAPAPPAPIPPPAPPQSSPPEQPQSMEMRSVLRKVGSPRKARRARLNPLVLLLDAALTGELEVVQQAVKEMNDPSQPNEEGITALHNAICGANYTIVDFLIAAGANVNSPDSHGWTPLHCAASCNDTAICMALVQHGAAIFATTVSDGATAIEKCDPYREGYADCATYLADVEHSMGLMHSGAVYALWDYSAEFGDELSFREGDSVTVLRRDGLEETDWWWAALHGQEGYVPRNYFGLFPRVKSQRNKV