Details from NCBI annotation

Gene Symbol Trappc6a
Gene Name trafficking protein particle complex 6A, transcript variant X3
Entrez Gene ID 101722331

Database interlinks

Part of NW_004624907.1 (Scaffold)

For more information consult the page for NW_004624907.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

TRAPPC6A ENSCPOG00000015115 (Guinea pig)

Gene Details

trafficking protein particle complex 6A

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000013624, Guinea pig)

Protein Percentage 81.76%
CDS Percentage 86.16%
Ka/Ks Ratio 0.16524 (Ka = 0.0961, Ks = 0.5819)

TRAPPC6A ENSG00000007255 (Human)

Gene Details

trafficking protein particle complex 6A

External Links

Gene Match (Ensembl Protein ID: ENSP00000006275, Human)

Protein Percentage 75.47%
CDS Percentage 83.23%
Ka/Ks Ratio 0.17586 (Ka = 0.1306, Ks = 0.7423)

Trappc6a ENSMUSG00000002043 (Mouse)

Gene Details

trafficking protein particle complex 6A

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000002112, Mouse)

Protein Percentage 70.44%
CDS Percentage 80.92%
Ka/Ks Ratio 0.17998 (Ka = 0.1594, Ks = 0.8859)

Trappc6a ENSRNOG00000017468 (Rat)

Gene Details

trafficking protein particle complex 6A (Trappc6a), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000023652, Rat)

Protein Percentage 71.7%
CDS Percentage 80.5%
Ka/Ks Ratio 0.12626 (Ka = 0.1528, Ks = 1.2104)

Genome Location

Sequence Coding sequence

Length: 480 bp    Location: 1924974..1916553   Strand: -
>XM_004873161.1
ATGGCGGATACCGTGCTGTTCCAGTTTCTGCACACCGAGATGGTGGCGCAGCTGTGGGCTCGGAACCCGGATCCACGCCCGGGGGGACAGAAGACAAGCCTGTCTGTCCTGGAGAGCGTGGGCTTCCGTGTGGGCCAGGCACTGGGCGAGAGGCTGCCCCAGGAGGCACTGGGCTTCAAAGAGGAGCTGGATGTCCTCAAATTCCTGTGCAAGGACCTGTGGGTGGCCGTGTTCCGCAAGCAGATGGACAGCCCGCGTGCGCCCCAGTCAGGGACCTACATCCTGCAGGACGACAGCTTCCCCCTCCCCGTCCCGATGGCCTTGGGCCTGCAGTACATGGAGGAGGCACCCAAGTTCCTGGCCTTCACCTGCGGCCTTCTGTGCGGTGTCCTCAGTACCCTGGGCTTCCAGAGCTTGGTCGCCACCTCCATGACAGCCCTGTCTGCGTGTACATTCCAGGTGGTGATCCAGAAACCCTGA

Related Sequences

XP_004873218.1 Protein

Trappc6a PREDICTED: NTPase KAP family P-loop domain-containing protein 1-like isoform X3 [Heterocephalus glaber]

Length: 159 aa      View alignments
>XP_004873218.1
MADTVLFQFLHTEMVAQLWARNPDPRPGGQKTSLSVLESVGFRVGQALGERLPQEALGFKEELDVLKFLCKDLWVAVFRKQMDSPRAPQSGTYILQDDSFPLPVPMALGLQYMEEAPKFLAFTCGLLCGVLSTLGFQSLVATSMTALSACTFQVVIQKP