Details from NCBI annotation

Gene Symbol Clptm1
Gene Name cleft lip and palate associated transmembrane protein 1
Entrez Gene ID 101718929

Database interlinks

Part of NW_004624907.1 (Scaffold)

For more information consult the page for NW_004624907.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

CLPTM1 ENSCPOG00000010264 (Guinea pig)

Gene Details

cleft lip and palate associated transmembrane protein 1

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000009217, Guinea pig)

Protein Percentage 97.77%
CDS Percentage 93.48%
Ka/Ks Ratio 0.02587 (Ka = 0.0108, Ks = 0.419)

CLPTM1 ENSG00000104853 (Human)

Gene Details

cleft lip and palate associated transmembrane protein 1

External Links

Gene Match (Ensembl Protein ID: ENSP00000336994, Human)

Protein Percentage 95.86%
CDS Percentage 91.46%
Ka/Ks Ratio 0.03328 (Ka = 0.0201, Ks = 0.604)

Clptm1 ENSMUSG00000002981 (Mouse)

Gene Details

cleft lip and palate associated transmembrane protein 1

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000051293, Mouse)

Protein Percentage 95.86%
CDS Percentage 88.45%
Ka/Ks Ratio 0.02905 (Ka = 0.0231, Ks = 0.7957)

Clptm1 ENSRNOG00000018255 (Rat)

Gene Details

cleft lip and palate associated transmembrane protein 1 (Clptm1), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000024779, Rat)

Protein Percentage 95.09%
CDS Percentage 88.29%
Ka/Ks Ratio 0.03244 (Ka = 0.0258, Ks = 0.7964)

Genome Location

Sequence Coding sequence

Length: 1959 bp    Location: 1773798..1801388   Strand: +
>XM_004873147.1
ATGGCGGCGGCGCAGGAGGCGGACGGGGCCGGCAGCGCCGTGGTGGCGGCCGGAGGAGGCGGCTCCGGTCAGGTGACCAGCAATGGCAGCATTGGGAGGGACCCGCCGGTGGAGACCCAGCCCCAGAACCCACCACCCCAGCCGGCACCCAATGCTTGGCAGGTCATCAAAGGTGTGCTGTTCAGGATCTTCATCATCTGGGCCATCAGCAGCTGGTTCCGCCGAGGGCCGGCCCCTCAGGACCAGACGGGCCCCGGAGGAGCCCCTCGCGTCGCCAGCCGCAACCTGTTCCCCAAAGACACTTTAATGAACCTACATGTGTACATCTCGGAGCACGAGCACTTTACAGACTTCAACGCCACCTCCGCGCTCTTCTGGGAGCAGCATGACCTGGTATACGGCGACTGGACCAGCGGTGAGAACTCTGATGGCTGCTACGAGCACTTCGCCGAGCTCGACATCCCGCAGAGTGTCCAGCAGAATGGCTCCATCTATATCCACGTCTACTTCACCAAGAGTGGCTTCCACCCAGACCCCCGGCAGAAGGCCTTGTACCGCCGGCTCGCCACTGTGCACATGTCCCGCATGATCAACAAGTACAAGCGCCGAAGATTCCAGAAAACCAAGAACCTGCTGACGGGAGAGACAGAAGCTGACCCAAAGATGATCAAGAGGGCTGAGGACTACGGGCCCGTGGAGGTGATCTCCCACTGGCACCCCAACATCACCATCAATATTGTGGACGACCACACGCCGTGGGTGAAGGGCAGCGTGCCGCCTCCCCTGGACCAGTACGTGAAGTTCGACGCTGTGAGCGGCGACTACTACCCCATCATCTACTTCAATGACTACTGGAACCTGCAGAAGGACTACTACCCCATCAACGAGAGCGTGGCCAGCCTGCCACTGCGCGTCTCCTTCTGCCCGCTCTCACTGTGGCGCTGGCAGCTCTATGCTGCCCAGAGCACCAAATCGCCATGGAACTTCCTGGGCGATGAGCTGTATGAACAGTCAGATGAGGAGCAGGACTCTGTGAAGGTCGCCCTCCTGGAGACCAACCCCTACCTGCTGGCACTCACCATCATCGTATCCATCGTCCACAGTGTCTTTGAGTTCCTAGCCTTCAAGAATGACATCCAATTCTGGAACAGCCGGCAGTCCCTGGAGGGGCTGTCTGTGCGCTCCGTCTTCTTCGGCGTCTTCCAGTCTTTCGTGGTTCTGCTCTACATCCTGGACAACGAGACCAACTTCGTGGTCCAGGTCAGCGTCTTCATTGGGGTCCTCATTGACCTCTGGAAGATCACCAAGGTCATGGACGTCCGGCTGGACCGGGAGCACAGACTGGTGGGAATCTTCCCCTGCCCGACCTTCAAAGACAAGTCCACATATATCGAGTCCTCCACCAAAGTGTATGATGACATGGCCTTCCGGTACCTGTCGTGGATCCTCTTCCCGCTCCTGGGCTGCTACGCTGTCTACAGCCTCCTGTACCTGGAGCACAAGGGCTGGTACTCCTGGGTGCTCAGCATGCTCTACGGCTTCCTGCTGACCTTTGGCTTTATCACCATGACCCCCCAGCTGTTCATCAACTACAAGCTCAAGTCCGTGGCCCACCTGCCGTGGCGCATGCTTACTTACAAGGCCCTCAACACCTTCATCGACGACCTGTTCGCCTTTGTCATCAAGATGCCTGTCATGTACCGAATTGGCTGCCTGCGGGATGACGTCGTGTTCTTCATCTACCTCTACCAACGGTGGATCTACCGCGTTGACCCCACCCGTGTGAACGAGTTTGGCATGAGTGGAGAGGACGTCACGGCAGCCACCCCTGTGCCCCAGGCCCCCACGACAGCAGGGGTGCTCACATCTGCGCCTGCCACCACAGCCAGCAAGGAGGCCACCCAATCCGAGCCCCAGGAAGCCCCTCCAAAGCCAGCAGAGGACAAGAAAGAGGATTAA

Related Sequences

XP_004873204.1 Protein

Clptm1 PREDICTED: cleft lip and palate transmembrane protein 1 homolog [Heterocephalus glaber]

Length: 652 aa      View alignments
>XP_004873204.1
MAAAQEADGAGSAVVAAGGGGSGQVTSNGSIGRDPPVETQPQNPPPQPAPNAWQVIKGVLFRIFIIWAISSWFRRGPAPQDQTGPGGAPRVASRNLFPKDTLMNLHVYISEHEHFTDFNATSALFWEQHDLVYGDWTSGENSDGCYEHFAELDIPQSVQQNGSIYIHVYFTKSGFHPDPRQKALYRRLATVHMSRMINKYKRRRFQKTKNLLTGETEADPKMIKRAEDYGPVEVISHWHPNITINIVDDHTPWVKGSVPPPLDQYVKFDAVSGDYYPIIYFNDYWNLQKDYYPINESVASLPLRVSFCPLSLWRWQLYAAQSTKSPWNFLGDELYEQSDEEQDSVKVALLETNPYLLALTIIVSIVHSVFEFLAFKNDIQFWNSRQSLEGLSVRSVFFGVFQSFVVLLYILDNETNFVVQVSVFIGVLIDLWKITKVMDVRLDREHRLVGIFPCPTFKDKSTYIESSTKVYDDMAFRYLSWILFPLLGCYAVYSLLYLEHKGWYSWVLSMLYGFLLTFGFITMTPQLFINYKLKSVAHLPWRMLTYKALNTFIDDLFAFVIKMPVMYRIGCLRDDVVFFIYLYQRWIYRVDPTRVNEFGMSGEDVTAATPVPQAPTTAGVLTSAPATTASKEATQSEPQEAPPKPAEDKKED