Details from NCBI annotation

Gene Symbol Xrcc1
Gene Name X-ray repair complementing defective repair in Chinese hamster cells 1, transcript variant X1
Entrez Gene ID 101701146

Database interlinks

Part of NW_004624907.1 (Scaffold)

For more information consult the page for NW_004624907.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

XRCC1 ENSCPOG00000005719 (Guinea pig)

Gene Details

X-ray repair complementing defective repair in Chinese hamster cells 1

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000005157, Guinea pig)

Protein Percentage 91.47%
CDS Percentage 90.61%
Ka/Ks Ratio 0.14603 (Ka = 0.0466, Ks = 0.3193)

XRCC1 ENSG00000073050 (Human)

Gene Details

X-ray repair complementing defective repair in Chinese hamster cells 1

External Links

Gene Match (Ensembl Protein ID: ENSP00000262887, Human)

Protein Percentage 87.56%
CDS Percentage 87.19%
Ka/Ks Ratio 0.14356 (Ka = 0.0659, Ks = 0.4588)

Xrcc1 ENSMUSG00000051768 (Mouse)

Gene Details

X-ray repair complementing defective repair in Chinese hamster cells 1

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000070995, Mouse)

Protein Percentage 85.07%
CDS Percentage 83.95%
Ka/Ks Ratio 0.12026 (Ka = 0.0804, Ks = 0.6684)

Xrcc1 ENSRNOG00000019915 (Rat)

Gene Details

X-ray repair complementing defective repair in Chinese hamster cells 1 (Xrcc1), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000027057, Rat)

Protein Percentage 85.55%
CDS Percentage 84.91%
Ka/Ks Ratio 0.12926 (Ka = 0.078, Ks = 0.6037)

Genome Location

Sequence Coding sequence

Length: 1884 bp    Location: 1113243..1087611   Strand: -
>XM_004873087.1
ATGCCGGAGATTCGCCTTCGCCACGTCGTGTCTTGCAGCAGCCAGGACTCGACCCATTGTGCAGAAAACCTTCTCAAGGCAGATACTTACCGGAAATGGCGGGCAGCCAAGGCCGGCGAGAAGTCCATCTCTGTGGTCTTACAGCTGGAGAAGGAGGAGCAGATCCACAGCGTGGACATTGGGAACAATGGCTCGGCCTTCGTAGAGGTGCTGGTGGGCAGCTCGGCCGGCGGGGCTGGTGAGCAAGACTATGAGGTGCTTCTGGTTACCTCATCTTTCATGTCCCCTTCCGAGAGCCGCAGTGGCTCAAACCCCAACCGTGTTCGAATTTTTGGGCCTGACAAGCTGGTCCGGACAGCAGCTGAGAAGCACTGGGACCGGATCAAAATTGTGTGCAGCCAGCCCTACAGCAAGGACTCCCCCTATGGCCTGAGTTTTATACGGCTTCATAGCCCTCCAGACAAAGAGGAGGCAGAGGTCCCATCCCAGAAGGTGACAGTGACTAAGCTTGGCCAGTTCCGGGTGAAGGAGGAGGATGAGAGCGCCAGCTCCCTGAGACCGGGGGCCCTTTTCTTCGGCAGGATAAACAAGACATCCCCAGCCAAAGCCAGTGACCCAGCAGGACCCAGCTATGCAGCAGCTACACTCCAGGCCTCCACGTCTCCACTCTCCAAGGCTGTGGGCAGCACCACTAAGCCTCAGGAGTCTACCAAAGGGAAGAGGAAGTTGGATTTGAATGTAGAAGAAAGGAAGATCCCCAGCAAACCGTCAGCCCAGCTCTCACCCCCTGCCCTCAAGAGACCCAAATTGCCAGCTCCCACCCGTAACCCAGCTGCAGCCCCGGTCCCTGCCACAGCACAGAGAGCTGTACCAAGGAAGCCCCGGGGAGAGGGCACCGAGCCCAGGGGAGCCCAAGCCGGCCCACAGGAGCTGGGGAAGATCCTTCAAGGTGTGGTGGTGGTGCTGAGCGGCTTCCAGAACCCCTTCCGCTCGGACCTCCGGGACAAGGCCCTGGAGCTGGGTGCCAAGTATCGGCCAGACTGGACCCCGGACAGCACTCACCTCATCTGCGCCTTTGCGAACACCCCCAAGTACAGCCAGGTCCTAGGCCTCGGAGGCCGCATCGTGCGCAAAGAGTGGGTGCTGGACTGTTACCGCATGCGGCGGCGGCTGCCCTCCCGGAGGTACCTCATGGCAGGGCCCGACTCCAGCAGCGAGGATGAGGTGGCCTCCCCCAGCGGCAGCAGTGGGGATGAAGCCCCCAGCCTTCCAAGAAAGTGCCCCCAGACCAAAGTCAAGCCTCCCCTGGCAGCTGGATCCAGCTCGCCCCAGAAGCCCCCAAGCCCAAAAGAGATCAAAGCAGCCTCAGTAGGACCCCAGGAAAATTCTGACACGGAGGAGCAGTCAGCAGGACGGGACAATGGTGCGGAAGAGTCTGGGGACACTGAGGATGAGCTGAGGAGGGTAGCCGAGCAGAGGGAGCACAGGCTGCCCCCTGGCCAGGAGGAGAACGGCGAGGACCCATATGCCGGCTCCACAGATGAGAACACCGATAACGAGGGTCACCCAGAGCTGCCTGAGGAGCCAATTCCCGAGCTCCCAGACTTCTTCCAGGGCAAACACTTCTTCCTGTATGGGGAGTTCCCCGGGGACGAGCGGCGGAAGCTCATTCGATACGTCACAGCCTTTAACGGGGAGCTAGAGGACTACATGAGTGACCGAGTCCAGTTTGTGATCACGGCACAGGAATGGGACTCTAGCTTTGAGGAGGCCCTGATGGACAACCCTTCCCTGGCATTTGTCCGGCCCCGATGGATCTACAGTTGCAACGAGAAGCAGAAGTTGCTTCCCCACCAGCTCTACGGGGTGGTGCCGCAGGCCTGA

Related Sequences

XP_004873144.1 Protein

Xrcc1 PREDICTED: DNA repair protein XRCC1 isoform X1 [Heterocephalus glaber]

Length: 627 aa      View alignments
>XP_004873144.1
MPEIRLRHVVSCSSQDSTHCAENLLKADTYRKWRAAKAGEKSISVVLQLEKEEQIHSVDIGNNGSAFVEVLVGSSAGGAGEQDYEVLLVTSSFMSPSESRSGSNPNRVRIFGPDKLVRTAAEKHWDRIKIVCSQPYSKDSPYGLSFIRLHSPPDKEEAEVPSQKVTVTKLGQFRVKEEDESASSLRPGALFFGRINKTSPAKASDPAGPSYAAATLQASTSPLSKAVGSTTKPQESTKGKRKLDLNVEERKIPSKPSAQLSPPALKRPKLPAPTRNPAAAPVPATAQRAVPRKPRGEGTEPRGAQAGPQELGKILQGVVVVLSGFQNPFRSDLRDKALELGAKYRPDWTPDSTHLICAFANTPKYSQVLGLGGRIVRKEWVLDCYRMRRRLPSRRYLMAGPDSSSEDEVASPSGSSGDEAPSLPRKCPQTKVKPPLAAGSSSPQKPPSPKEIKAASVGPQENSDTEEQSAGRDNGAEESGDTEDELRRVAEQREHRLPPGQEENGEDPYAGSTDENTDNEGHPELPEEPIPELPDFFQGKHFFLYGEFPGDERRKLIRYVTAFNGELEDYMSDRVQFVITAQEWDSSFEEALMDNPSLAFVRPRWIYSCNEKQKLLPHQLYGVVPQA