Details from NCBI annotation

Gene Symbol Pafah1b3
Gene Name platelet-activating factor acetylhydrolase 1b, catalytic subunit 3 (29kDa), transcript variant X5
Entrez Gene ID 101713250

Database interlinks

Part of NW_004624907.1 (Scaffold)

For more information consult the page for NW_004624907.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

PAFAH1B3 ENSCPOG00000004397 (Guinea pig)

Gene Details

platelet-activating factor acetylhydrolase 1b, catalytic subunit 3 (29kDa)

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000003967, Guinea pig)

Protein Percentage 93.51%
CDS Percentage 92.5%
Ka/Ks Ratio 0.16666 (Ka = 0.0359, Ks = 0.2153)

PAFAH1B3 ENSG00000079462 (Human)

Gene Details

platelet-activating factor acetylhydrolase 1b, catalytic subunit 3 (29kDa)

External Links

Gene Match (Ensembl Protein ID: ENSP00000444935, Human)

Protein Percentage 95.24%
CDS Percentage 91.49%
Ka/Ks Ratio 0.08486 (Ka = 0.0268, Ks = 0.3162)

Pafah1b3 ENSMUSG00000005447 (Mouse)

Gene Details

platelet-activating factor acetylhydrolase, isoform 1b, subunit 3

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000005583, Mouse)

Protein Percentage 93.51%
CDS Percentage 86.87%
Ka/Ks Ratio 0.05578 (Ka = 0.0342, Ks = 0.6128)

Pafah1b3 ENSRNOG00000020481 (Rat)

Gene Details

platelet-activating factor acetylhydrolase 1b, catalytic subunit 3 (Pafah1b3), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000027774, Rat)

Protein Percentage 93.94%
CDS Percentage 87.3%
Ka/Ks Ratio 0.05114 (Ka = 0.0314, Ks = 0.6141)

Genome Location

Sequence Coding sequence

Length: 696 bp    Location: 454405..457551   Strand: +
>XM_004873027.1
ATGAGCAAAGAGGAGAATCCAGCCAGCAAGCCCACACCGGTGCAGGACGTGCAGGGCGACGGGCGATGGATGTCCCTGCACCATCGGTTCGTGGCGGACAGCAAAGACAAGGAGCCCGAAGTAGTCTTCATCGGGGACTCCTTGGTCCAATTAATGCACCAGTGCGAGATTTGGCGAGAGCTCTTCTCTCCTTTGCACGCACTTAACTTTGGCATTGGTGGTGACAGCACACAGCATGTACTGTGGCGGCTGGAGAATGGGGAGCTAGAACACATCCGGCCCAAGATTGTGGTGGTCTGGGTGGGCACCAACAACCACGGGCACACAGCGGAGCAGGTGACTGGTGGCATCAAGGCCATTGTGGAACTGGTGAACCAGCGGCAGCCCCAGGCCCGGGTCGTGGTGCTGGGCCTGCTTCCAAGGGGCCAGCACCCAAACCCACTTCGGGAGAAGAACCGACTGGTGAACGAGCTCATACGGGCAGCACTGGCAGGCCACCCACGGGCCCACTTCCTAGATGCTGACCCTGGCTTTGTGCACTCCGATGGCACCATAAGCCATCATGACATGTATGATTATCTTCATCTGACTCGCCTAGGCTACACACCTGTCTGTCGGGCCCTGCACTCCCTGCTTCTGCGTCTCCTGGCCCAAGACCAGGGCCAGAGTGTTCCTCTGGCAGAGCCCACACCCTAA

Related Sequences

XP_004873084.1 Protein

Pafah1b3 PREDICTED: platelet-activating factor acetylhydrolase IB subunit gamma isoform X5 [Heterocephalus glaber]

Length: 231 aa      View alignments
>XP_004873084.1
MSKEENPASKPTPVQDVQGDGRWMSLHHRFVADSKDKEPEVVFIGDSLVQLMHQCEIWRELFSPLHALNFGIGGDSTQHVLWRLENGELEHIRPKIVVVWVGTNNHGHTAEQVTGGIKAIVELVNQRQPQARVVVLGLLPRGQHPNPLREKNRLVNELIRAALAGHPRAHFLDADPGFVHSDGTISHHDMYDYLHLTRLGYTPVCRALHSLLLRLLAQDQGQSVPLAEPTP