Details from NCBI annotation

Gene Symbol Atpaf1
Gene Name ATP synthase mitochondrial F1 complex assembly factor 1, transcript variant X1
Entrez Gene ID 101724337

Database interlinks

Part of NW_004624906.1 (Scaffold)

For more information consult the page for NW_004624906.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

ATPAF1 ENSCPOG00000003349 (Guinea pig)

Gene Details

ATP synthase mitochondrial F1 complex assembly factor 1

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000003027, Guinea pig)

Protein Percentage 92.94%
CDS Percentage 94.17%
Ka/Ks Ratio 0.2743 (Ka = 0.0357, Ks = 0.1302)

ATPAF1 ENSG00000123472 (Human)

Gene Details

ATP synthase mitochondrial F1 complex assembly factor 1

External Links

Gene Match (Ensembl Protein ID: ENSP00000460964, Human)

Protein Percentage 86.86%
CDS Percentage 88.48%
Ka/Ks Ratio 0.21571 (Ka = 0.0685, Ks = 0.3175)

Atpaf1 ENSMUSG00000028710 (Mouse)

Gene Details

ATP synthase mitochondrial F1 complex assembly factor 1

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000135831, Mouse)

Protein Percentage 89.08%
CDS Percentage 87.74%
Ka/Ks Ratio 0.13885 (Ka = 0.0576, Ks = 0.4151)

Atpaf1 ENSRNOG00000010169 (Rat)

Gene Details

ATP synthase mitochondrial F1 complex assembly factor 1 (Atpaf1), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000013533, Rat)

Protein Percentage 88.51%
CDS Percentage 87.74%
Ka/Ks Ratio 0.14973 (Ka = 0.0598, Ks = 0.3993)

Genome Location

Sequence Coding sequence

Length: 1059 bp    Location: 2540599..2518500   Strand: -
>XM_004872968.1
ATGGAGCAGGCACGAGAGCCTGGGGCTGTAGCTGACACACCTGAGGAGGGGGAGGTGGGGGAGGCAGGGGCGGCAATGGCGGCTGTCGTGGCCGCTGCAGGTGGCGCGGGCCCGGCCGTCCTGCAAGTGGCCGGCCTCTACCGAGGCCTATGCACGGTGCGCAGTCGGGCCCTGGGCCTGGGATTTGTTTCACCCGCACAGCTGCGCGTGTTCCCTGTGCGCCGCGACTCGGGCCAGCCTTCTGGGAGCGCAGATGGCGGCGGCGGCGGGGTCGGGGCCGACCTGGAGGCCAACCCCTTCTACCACCGCTACCGGGACAAGATCCAGCAACTGCGCAGGTCTGACCCAGCTGCTTTTGAGTCGCGCCTGGAGAAACGCAGTGAGTTTCAGAAGCAGCCAGTGGGGTACTCTAAGCAAGGTGATTTCATCAGATGTATGGAGCAGAAGACAGATGTCTTGGAGAAGCAGCCTATGAGCAAAGGATTCACTAAAGACAAGACTCTCGGTTCAATCTTTAACATTGAGATGGTGAAAGACAAAACTGCAGAAGAAATAAAACAGATTTGGCAGCAGTATTTTGCAGCAAAAGATACAGTCTACGCAGTCATTCCTAAAGAGAAGTTTGATTTGATCTGGAGTCGGGCTCAGTCCTGTCCAACATTTCTGTGTGCACTGCCAAGAAGGGAAGGTTATGAGTTCTTTGTTGGACAATGGACAGGTACTGAACTTCACTTCACTGCACTTATAAATATTCAGACCCGAGGAGATGCCGCAGCCAGCCAGTTGATTTTATATCACTACCCTGAACTTAAGGAAGAAAAGGGCATAGTGCTGATGACGGCAGAAATGGATGCCACATTTCTGAATGTTACTGAGGCACAGTGCATCGCCAATCAAGTTCAGCTCTTCTATGCCACTGATCGTAAAGAGACCTATGGGTTAGTGGAGACATTTAACTTCCGACCAAATGAGTTCAAATATATGTCTGTCATCGCTGAATTGGAGCAAAGTGGACTTGGAGCAGAACTGAAATGTACCCAGAATGAGGATAAGACTTAG

Related Sequences

XP_004873025.1 Protein

Atpaf1 PREDICTED: ATP synthase mitochondrial F1 complex assembly factor 1 isoform X1 [Heterocephalus glaber]

Length: 352 aa      View alignments
>XP_004873025.1
MEQAREPGAVADTPEEGEVGEAGAAMAAVVAAAGGAGPAVLQVAGLYRGLCTVRSRALGLGFVSPAQLRVFPVRRDSGQPSGSADGGGGGVGADLEANPFYHRYRDKIQQLRRSDPAAFESRLEKRSEFQKQPVGYSKQGDFIRCMEQKTDVLEKQPMSKGFTKDKTLGSIFNIEMVKDKTAEEIKQIWQQYFAAKDTVYAVIPKEKFDLIWSRAQSCPTFLCALPRREGYEFFVGQWTGTELHFTALINIQTRGDAAASQLILYHYPELKEEKGIVLMTAEMDATFLNVTEAQCIANQVQLFYATDRKETYGLVETFNFRPNEFKYMSVIAELEQSGLGAELKCTQNEDKT