Sequence details NCBI ID: XM_004872953.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Rad54l
Gene Name RAD54-like (S. cerevisiae), transcript variant X1
Entrez Gene ID 101719853

Database interlinks

Part of NW_004624906.1 (Scaffold)

For more information consult the page for NW_004624906.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

RAD54L ENSCPOG00000006768 (Guinea pig)

Gene Details

RAD54-like (S. cerevisiae)

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000006099, Guinea pig)

Protein Percentage 95.05%
CDS Percentage 93.4%
Ka/Ks Ratio 0.13381 (Ka = 0.0258, Ks = 0.1927)

RAD54L ENSG00000085999 (Human)

Gene Details

RAD54-like (S. cerevisiae)

External Links

Gene Match (Ensembl Protein ID: ENSP00000361043, Human)

Protein Percentage 94.91%
CDS Percentage 91.39%
Ka/Ks Ratio 0.08482 (Ka = 0.0258, Ks = 0.3047)

Rad54l ENSMUSG00000028702 (Mouse)

Gene Details

RAD54 like (S. cerevisiae)

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000099765, Mouse)

Protein Percentage 94.51%
CDS Percentage 88.26%
Ka/Ks Ratio 0.05214 (Ka = 0.0265, Ks = 0.5074)

RAD54L ENSRNOG00000013148 (Rat)

Gene Details

RAD54 like (S. cerevisiae) (Rad54l), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000018004, Rat)

Protein Percentage 93.71%
CDS Percentage 87.33%
Ka/Ks Ratio 0.05995 (Ka = 0.0322, Ks = 0.5375)

Genome Location

Sequence Coding sequence

Length: 2439 bp    Location: 2133756..2193887   Strand: +
Raw sequence   
>XM_004872953.1
ATGGAGGGGACCGTGGAGACCCAGACGCTTGATCTGCGGGACGTGGAGGGCAAGGTGGGCAGGAAGACCCCAGAAGGGCTGCTCCGCGGGCTTCGAGGAGACTGGGAGCTCGGACCCTCTGGCGCCCTGCTGCTCCCGGGGGCGCCCGGCACCAGCCACGGCCTGGGGGACAAGATCCTGGCGCTGAGGATGGAGCTGAGGAGGAGCTTAGCTCCCAGCCAGCTGGCCAAGAGAAAACCAGACGGCAGGTCCTCTGATGATGAAGATTGGCATCCTGGGGCAGTGACTCCTAAGAAACGGAAATCTAGCAATGAGACCCAGATCCAAGAGTGTTTCCTGTCTCCTTTTCGGAAACCTTTGACTCAGCTAATCAATCGACCACCCTGTCTGGATAGCAGTCAACATGAAGCATTTATCCGAAGCATTTTGTCAAAGCCTTTTAAAGTTCCCATTCCGAATTATCAAGGTCCTCTGGGCTTTCGGGCATTGGGCCTGAAAAGGGCTGGTGTCCGCCGGGCCCTCCATGACCCCCTGGAAGAAGGTGCCTTGGTTCTATATGAGCCTCCCCCATTGAGTGCCCACGACCAGCTGAAGCTCGACAAGGAAAAACTCCTTGTCCATGTGGTTGTTGATCCTGTTCTCAGTAAGGTTCTGCGGCCTCATCAGAGAGAGGGAGTGAAGTTCCTGTGGGAATGTGTCACCAGTCGCCGCATCCCTGGCAGCTACGGCTGCATTATGGCTGATGAGATGGGCCTGGGAAAGACGCTGCAATGCATTGCATTGATGTGGACACTTTTGCGCCAGAGTCCAGAGTGCAAACCGGAAATTGACAAAGCAGTGGTCGTGTCGCCCTCCAGTCTAGTGAAGAACTGGTACAATGAGGTTGGGAAGTGGCTTGGAGGAAGGATCCAACCTCTGGCTATCGATGGCGGATCCAAGGATGAGATAGACCAAAAGCTGGAAGGATTCATGAACCAGCGTGGAGCCAGAGTGCCTTCTCCCATCCTCATCATTTCCTATGAGACCTTCCGCCTTCATGTCGGAGTCCTTCAGAAAGGAAGTGTTGGGCTGGTCATATGTGATGAGGGACATAGGCTCAAGAACTCAGAGAATCAGACTTATCAGGCTCTGGACAGCTTGAACACCAGCCGAAGAGTGCTCATATCTGGGACTCCCATCCAGAATGATCTGCTTGAATATTTCAGCTTGGTCCATTTTGTTAACTCAGGCATCCTGGGGACTGCCCAGGAGTTCAAGAAGCATTTTGAGTTACCAATTTTGAAGAGTCGAGATGCAGCTGCCAGTGAGGCAGATAGGCAGCTAGGGGAGGAGCGACTGCAAGAGCTCATTAGCATTGTGAACAGGTGTCTGATACGGAGGACATCTGATATCCTTTCTAAATATCTGCCTGTGAAGATTGAGCAGGTGGTTTGTTGCAGGCTTACACCCCTTCAGACTGAGTTATACAAGAGGTTTCTGAGACAAGCCAAGCCAGCAGAAGAATTGCGTGAAGGCAAGATGAGTGTATCTTCCCTTTCTTCCATCACATCACTAAAGAAGCTTTGTAATCATCCAGCTCTAATTCATGACAAGTGTGTAGAAGAGGAGGATGGTTTTGAGGGTGCCTTGGACATCTTTCCCCCTGGTTATAGTTCTAAGGCTATAGAGCCACAGCTGTCAGGTAAGATGTTGGTCCTTGATTATATTCTGGCGGTGACCCGAAGTTGCAGCAGTGACAAAGTAGTGCTGGTGTCCAATTACACCCAGACATTGGATCTCTTTGAGAAGCTCTGCCGAGCGCGAAGGTACTTGTATGTCCGGCTGGATGGCACGATGTCCATTAAGAAGCGAGCCAAGGTTGTGGAACGTTTCAATAGTCCATCGAGCCCTGATTTTGTCTTCATGCTGAGCAGTAAAGCTGGGGGCTGTGGCCTCAATCTCATTGGGGCCAACCGGCTGGTCATGTTTGATCCTGACTGGAACCCAGCAAATGATGAACAAGCCATGGCTCGGGTTTGGCGTGATGGTCAAAAGAAGACCTGCTATATCTATCGCCTACTGTCTGCAGGAACCATCGAGGAGAAGATCTTCCAGCGGCAGAGCCACAAGAAGGCGCTAAGTAGCTGTGTGGTAGATGAGGAGCAGGATGTAGAGCGGCACTTCTCTCTGGGCGAGCTGAAGGAGCTGTTTATCCTGGATGAAGCTAGCCTTAGTGACACACATGACAGGCTGCAGTGCCGCCGATGTGTCAACAACCATCAGGTCCGGCCACCCCCTGATGGTTCTGACTGCACTTCAGACCTGGGTCAGTGGAATCACAGCACTGATAAGCGAGGACTGCAGGATGAGGTACTCCAGGCTGCCTGGGACGCTGCCTCCACAGCCATCACCTTCGTCTTCTACCAGCGTTCCCATGAAGAGCAGCGGGGGCTTCGCTGA

Related Sequences

XP_004873010.1 Protein

Rad54l PREDICTED: DNA repair and recombination protein RAD54-like isoform X1 [Heterocephalus glaber]

Length: 812 aa      View alignments
>XP_004873010.1
MEGTVETQTLDLRDVEGKVGRKTPEGLLRGLRGDWELGPSGALLLPGAPGTSHGLGDKILALRMELRRSLAPSQLAKRKPDGRSSDDEDWHPGAVTPKKRKSSNETQIQECFLSPFRKPLTQLINRPPCLDSSQHEAFIRSILSKPFKVPIPNYQGPLGFRALGLKRAGVRRALHDPLEEGALVLYEPPPLSAHDQLKLDKEKLLVHVVVDPVLSKVLRPHQREGVKFLWECVTSRRIPGSYGCIMADEMGLGKTLQCIALMWTLLRQSPECKPEIDKAVVVSPSSLVKNWYNEVGKWLGGRIQPLAIDGGSKDEIDQKLEGFMNQRGARVPSPILIISYETFRLHVGVLQKGSVGLVICDEGHRLKNSENQTYQALDSLNTSRRVLISGTPIQNDLLEYFSLVHFVNSGILGTAQEFKKHFELPILKSRDAAASEADRQLGEERLQELISIVNRCLIRRTSDILSKYLPVKIEQVVCCRLTPLQTELYKRFLRQAKPAEELREGKMSVSSLSSITSLKKLCNHPALIHDKCVEEEDGFEGALDIFPPGYSSKAIEPQLSGKMLVLDYILAVTRSCSSDKVVLVSNYTQTLDLFEKLCRARRYLYVRLDGTMSIKKRAKVVERFNSPSSPDFVFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDEQAMARVWRDGQKKTCYIYRLLSAGTIEEKIFQRQSHKKALSSCVVDEEQDVERHFSLGELKELFILDEASLSDTHDRLQCRRCVNNHQVRPPPDGSDCTSDLGQWNHSTDKRGLQDEVLQAAWDAASTAITFVFYQRSHEEQRGLR