Sequence details NCBI ID: XM_004872951.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Lrrc41
Gene Name leucine rich repeat containing 41, transcript variant X1
Entrez Gene ID 101719267

Database interlinks

Part of NW_004624906.1 (Scaffold)

For more information consult the page for NW_004624906.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

LRRC41 ENSCPOG00000006775 (Guinea pig)

Gene Details

leucine rich repeat containing 41

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000006106, Guinea pig)

Protein Percentage 98.03%
CDS Percentage 95.7%
Ka/Ks Ratio 0.07564 (Ka = 0.0098, Ks = 0.1295)

LRRC41 ENSG00000132128 (Human)

Gene Details

leucine rich repeat containing 41

External Links

Gene Match (Ensembl Protein ID: ENSP00000343298, Human)

Protein Percentage 97.41%
CDS Percentage 93.6%
Ka/Ks Ratio 0.05983 (Ka = 0.0128, Ks = 0.2135)

Lrrc41 ENSMUSG00000028703 (Mouse)

Gene Details

leucine rich repeat containing 41

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000030471, Mouse)

Protein Percentage 95.79%
CDS Percentage 90.29%
Ka/Ks Ratio 0.07052 (Ka = 0.0237, Ks = 0.3365)

Lrrc41 ENSRNOG00000013642 (Rat)

Gene Details

leucine rich repeat containing 41 (Lrrc41), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000018506, Rat)

Protein Percentage 95.3%
CDS Percentage 89.6%
Ka/Ks Ratio 0.07149 (Ka = 0.0262, Ks = 0.367)

Genome Location

Sequence Coding sequence

Length: 2445 bp    Location: 2216915..2193887   Strand: -
Raw sequence   
>XM_004872951.1
ATGGCGGCACCCGAGGCCTGGCGCGCCCGGAGTTGCTGGTTCTGTGAGGTAGCGGCGGCAACGACCATGGAGGCCACGTCCCGGGAGGCGGCGCCAGCGAAGAGCTCGGCCTCGGGCCCCAGCGCTCCCCCCGCCCTGTTCGAGCTGTGCGGGCGGGCAGTGAGCGCCCATATGGGGGTTCTGGAGAGCGGGGTGTGGGCCCTCCCAGGCCCAATACTTCAAAGCATCTTACCTCTGCTCAATATATATTACTTGGAGAGGATTGAGGAAACTGCCCTCAAGAAAGGCCTCTCCACTCAGGCTATCTGGCGCCGACTCTGGGATGAGCTGATGAAGACAAGACCTTCCAGTTTGGAAAGTGTGACCTGTTGGCGAGCCAAGTTTATGGAAGCCTTTTTTTCCCATGTTCTACGTGGTACCATTGATGTGTCTTCTGACAGGCGTCTTTGCGACCAGCGCTTCTCACCTCTTCTGCATAGCTCTCGTCATGTCCGGCAACTCACCATCTGCAACATGCTGCAGGGTGCAACAGAGTTGGTGGCTGAGCCCAACCGCAGGGTTTTGGAGACCCTGGCCAGTTCCCTGCACACCCTCAAGTTCCGCCACCTGCTGTTCTCTGATGTGGCTGCTCAGCAGTCACTTCGGCAGCTGTTGCATCAGCTCATTCACCATGGCGCTGTCAGCCAAGTGTCGCTGTACTCCTGGCCTGTGCCTGAGTCAGCACTTTTCATCCTTATCCTCACCATGAGTGCTGGCTTTTGGCAACCAGGCCCTGGTGGCCCACCCTGCCGCCTCTGTGGAGAGGCTTCCCGAGGCCGAGCCACATCCCGAAATGAAGGGTCTCTGCTGCTGGGCTCACGCCGGCCTCGCCGGGATGCTGCCGAGCGTTGTGCTGCAGCCCTGATGGCTACCCGGAGAAAGAGTGAAACCAAGCAGATGCCCAGAGCTGCACCTGCCACTCGGGTAACACGACGGAGCACACATGAGAGCCTGATAGCAAGCGGGACAGACCTTAAGAGAGGGCTGCACCCTCCAGCCACTTCCCATGAGGCTTCTGGTACCAAGCGGCCACCTTCTACTCTGGCTGCCACCTCTTCTGCCTCTGCCTCCTCTTCCACAGCCTCATCCAAAAGGGCTCCAGCTAACTCAGCCCCACAACCTAAGCCCTTAAAGCGTTTCAAACGAGCTGCAGGGAAGAAGGGTCCTCGTGCTCGTCAGGGATCTGGTGCAGAGTCTGAAGACCTGTATGACTTTGTTTTTATTGTTGCTGGTGAAAAGGAAGATGGTGAAGAGATGGAGATTGGGGAAGTGGCTTGTGGAGCTTTGGATGGATCAGATCCCAGCTGCCTGGGGCTCCCAGCCCTGGAAGCCTCCCAAAGATTCCGCAGCATCTCCACTTTGGAGCTATTCACAGTTCCCCTCTCCACAGAGGCAGCTTTGACACTGTGCCACCTGCTGAGCTCCTGGGTGTCTCTGGAGAGCCTCACACTCTCCTACAATGGCCTGGGCTCTAACATCTTCCGCCTGCTGGACAGCCTGAGGGCCCTGTCAGGCCAGGCTGGATGCCGCCTCCGTGCCCTGCATCTCAGTGACCTATTCTCACCGCTGCCCATCCTGGAGTTGACACGTGCCATCGTTCGAGCCCTGCCCCTACTTCGGGTTCTCTCTATTCGTGTGGATCATCCAAGTCAGCGGGACAACCCTGCTGTGCCAGGGAATGCTGGGGCCCCCAGTCACATAATTGGAGATGAAGAGATACCAGAAAACTGTCTCGAGCAGTTGGAGATGGGATTTCCACGAGGAGCCCAGCCGGCCCCACTGCTCTGCTCTGTTCTGAAGGCCTCAGGTTCTCTACAGCAGCTGTCCCTGGATAGTGCCACCTTTGCCTCTCCCCAGGATTTTGGACTTGTGTTGCAGACACTCAAAGAGTACAACTTAGCCCTGAAGAGGCTGAGCTTCCATGACATGAATCTGGCTGACTGTCAGAGCGAGGTGCTCTTTTTGCTACAGAATCTGACTCTTCAAGAGATTACCTTCTCCTTCTGCCGTCTGTTTGAGAAGCGCCCAGCCCAATTTCTGCCTGAGATGGTTGCTGCTATGAAGGGCAACTCCACACTGAAGGGCCTTCGGCTGCCTGGGAACCGCCTGGGAAATGCTGGCCTGTTGGCTCTGGCAGATGTTTTCTCAGAGGATTCTTCCTCTTCTCTCTGTCAGCTGGACATCAGTTCCAACTGCATCAAGCCAGATGGGCTTCTGGAGTTTGCCAAGCGGCTGGAGCGCTGGGGCCGTGGAGCCTTTGGTCACCTGCGCCTCTTCCAGAACTGGCTGGACCAGGATGCAGTCACAGCCAGGGAAGCCATCCGGCGGCTCCGGGCCACCTGCCACGTGGTTAGCGACTCATGGGACTCCTCCCAAGCCTTTGCAGATTACGTCAGCACCATGTGA

Related Sequences

XP_004873008.1 Protein

Lrrc41 PREDICTED: leucine-rich repeat-containing protein 41 isoform X1 [Heterocephalus glaber]

Length: 814 aa      View alignments
>XP_004873008.1
MAAPEAWRARSCWFCEVAAATTMEATSREAAPAKSSASGPSAPPALFELCGRAVSAHMGVLESGVWALPGPILQSILPLLNIYYLERIEETALKKGLSTQAIWRRLWDELMKTRPSSLESVTCWRAKFMEAFFSHVLRGTIDVSSDRRLCDQRFSPLLHSSRHVRQLTICNMLQGATELVAEPNRRVLETLASSLHTLKFRHLLFSDVAAQQSLRQLLHQLIHHGAVSQVSLYSWPVPESALFILILTMSAGFWQPGPGGPPCRLCGEASRGRATSRNEGSLLLGSRRPRRDAAERCAAALMATRRKSETKQMPRAAPATRVTRRSTHESLIASGTDLKRGLHPPATSHEASGTKRPPSTLAATSSASASSSTASSKRAPANSAPQPKPLKRFKRAAGKKGPRARQGSGAESEDLYDFVFIVAGEKEDGEEMEIGEVACGALDGSDPSCLGLPALEASQRFRSISTLELFTVPLSTEAALTLCHLLSSWVSLESLTLSYNGLGSNIFRLLDSLRALSGQAGCRLRALHLSDLFSPLPILELTRAIVRALPLLRVLSIRVDHPSQRDNPAVPGNAGAPSHIIGDEEIPENCLEQLEMGFPRGAQPAPLLCSVLKASGSLQQLSLDSATFASPQDFGLVLQTLKEYNLALKRLSFHDMNLADCQSEVLFLLQNLTLQEITFSFCRLFEKRPAQFLPEMVAAMKGNSTLKGLRLPGNRLGNAGLLALADVFSEDSSSSLCQLDISSNCIKPDGLLEFAKRLERWGRGAFGHLRLFQNWLDQDAVTAREAIRRLRATCHVVSDSWDSSQAFADYVSTM