Details from NCBI annotation

Gene Symbol Ptch2
Gene Name patched 2, transcript variant X1
Entrez Gene ID 101703499

Database interlinks

Part of NW_004624906.1 (Scaffold)

For more information consult the page for NW_004624906.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

PTCH2 ENSCPOG00000012790 (Guinea pig)

Gene Details

patched 2

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000011510, Guinea pig)

Protein Percentage 88.89%
CDS Percentage 89.61%
Ka/Ks Ratio 0.19945 (Ka = 0.0591, Ks = 0.2965)

PTCH2 ENSG00000117425 (Human)

Gene Details

patched 2

External Links

Gene Match (Ensembl Protein ID: ENSP00000361266, Human)

Protein Percentage 90.61%
CDS Percentage 89.3%
Ka/Ks Ratio 0.13622 (Ka = 0.0493, Ks = 0.3621)

Ptch2 ENSMUSG00000028681 (Mouse)

Gene Details

patched homolog 2

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000030443, Mouse)

Protein Percentage 88.75%
CDS Percentage 86.35%
Ka/Ks Ratio 0.11688 (Ka = 0.0602, Ks = 0.5153)

Genome Location

Sequence Coding sequence

Length: 3624 bp    Location: 726519..707270   Strand: -
>XM_004872909.1
ATGGCTGGGCCGCCGCCCCTCAGAGAGCTGCCCCCCGACTACATGCCCCCAGATTCACCCGCAGCATCTCAGATCCTAACTGTAAGCCTGAAGGCTCCCCTCTGGCTTCGAGCTTACTTCCAGCGTCTGCTCTTCTCTCTGGGCTGCAGCATCCAGAGACACTGTGGCAAGGTGCTCTTCCTGGGACTGTTGGCCTTTGGGGCTCTGGCACTGGGTCTCCGTGTGGCCATTATTGAGACAGACCTGGAACAGCTCTGGGTAGAAGTGGGCAGCCGAGTGAGTCAAGAGCTGCATTATACCAAGGAGAAGCTGGGAGAGGAAGCTGCCTACACCTCCCAGATGTTGATTCAGACCGCCCGCCAGGAGGGGAAGAATGTCCTCACATCAGAAGCACTTGGCCTCCACCTCCAAGCAGCCTTTACTGCCAGTAAAGTGCAAGTATCGCTGTATGGAAAGTCCTGGGATTTGAACAAAATCTGCTATAAGTCAGGAGTTCCCCTTATTGAAAATGGAATGATTGAGCGGATGATTGAGAAGCTGTTTCCATGTGTGATCCTCACACCACTTGACTGCTTCTGGGAAGGAGCCAAACTCCAAGGGGGCTCTGCCTACTTGCCGGGCCGCCCTGATATCCAGTGGACCAACCTGAATCCAGAGCAGCTGCTCGAGGAACTGGGCCCCTTTGCCTCCCTAGAAGGCTTTCGGGAACTGTTAGACAAGGCACAAGTGGGCCAAGCCTATGTAGGGCGCCCCTGTCTGGACCCCGATGACCTCCAGTGCCCTCCTACTGCCCCCAACCACCGCAGCAGGCAGGCTCCCAATGTGGCTCAGGAGCTGAGTGGAGGATGCCATGGCTTCTCTCATAAATTCATGCACTGGCAAGAGGAATTGTTGCTAGGAGGCATGGCCCGAGACCCCCGAGGACAGCTACTGAGGGCAGAGGCCCTCCAGAGCACTTTCCTGCTCATGAGTCCCCACCAGCTGTATGAGCACTTCCGAGGCGACTACCAGACCCACGACATCGGCTGGAGTGAAGAGCAGGCTGGCATAGTGCTACAAGCCTGGCAGCGGCGATTTGTACAGCTGGCCCAGGAAGCCCTGCCTGAGAACTCATCGCAGCAGATCTATGCCTTCTCTTCCACCACCCTGGAGGACATCCTGCATGCCTTCTCGGAAGTCAGCGCTTCACGTGTGGTGGGAGGCTATCTACTAATGCTGGCCTACGCCTGTGTGACAATGCTACGGTGGGACTGTGCCCAGTCTCAGGGGACCGTGGGCCTTGCTGGGGTGTTGCTGGTGGCCCTGGCAGTGGCCTCAGGCCTTGGGCTCTGTGCCATGCTCGGCATTGCCTTCAATGCTGCTACTACTCAGGTGCTGCCCTTCTTGGCACTGGGCATTGGTGTGGATGACATATTCCTGATGGCACATGCCTTCACAAAGGCCCCACCTGGCACCCCCCTCCAGGAGCGCATGGGCGAGTGTCTGCAGCGCACGGGCACCAGCGTCGCACTCACATCCATCAACAACATGGTTGCCTTCTTCATGGCTGCCCTGGTTCCCATCCCTGCACTGCGGGCCTTCTCCCTGCAGGCGGCTGTTGTGGTTGGCTGCAACTTCACAGCAGTGATGCTCATCTTCCCAGCCATCCTCAGCCTGGACCTGCACCGGCGCCACTGCCAGCGCCTTGATGTGCTCTGCTGCTTCTCCAGCCCCTGTTCTGCTCGAGTGATTCAGATTCTGCCCCAAGAGCTGGGGAATAGGACACTACCAGTGGGCATTGCCCACCTGACCACCACAGTACAAGCTTTCACTCACTGTGAAGCCAGCAGCCAGCATGTGGTCACCATCTTGCCTCCTCAAGCCCACCTGGTGCCCCCACCTTCTGACCCACTGGCCTCTGAGCTCTTCAGCCCTCGAGGCTCCACACGGGACCTTCTAGACCAAGAGGAGGGGTCAAGGCAGAAGCCAGCCTTCAAGTCACTCCCTTGTGCCTGCTGGAATCTTGCCCATTTCGCCCGGTATCGGTTTGCACCCTTGCTGCTCCAGTCACATGCCAAGGCCATGGTGCTGGTGTTCTTTGGGGCTCTTCTGGCCCTGAGCCTCTACGGAGCCACCTTGGTGCAGGATGGGCTGGCCCTGACCGATGTGGTGCCTCGGAGCACCAAGGAACATGCCTTCCTGAGCGCCCAGCTCAGGTACTTCTCCCTGTACGAGGTGGCCGTGGTGACCCAGGGTGGCTTTGACTACGCCCACTCCCAACGTGCCCTCTTTGATCTGCACCAGCGCTTCAGTTCCCTCAAGGCTGTTTTGCCCCCGCCTGCCACCCACACACCCCGAACCTGGCTGCACTATTACCGCAACTGGCTACAGGGAATCCAGGCTGCGTTTGACCAGGACTGGGCTTCTGGACGAATTACCCGCCACTCCTACCGAAATGGCTCTGAGGATGGGGCCCTGGCCTACAAGCTGCTCATCCAGACCGGAAATGCCCAGGAACCTCTGGATTTCAGCCAGCTGACCACAAGGAAGCTGGTGGACAAGGAAGGCCTGATCCCCCCAGAGCTCTTCTATATGGGGCTAACTGTGTGGGTGAGCAGTGACCCCCTGGGGCTGGCAGCCTCACAGGCCAACTTCTACCCCCCACCTCCCGAATGGCTGCACAACAGATTCGACACCACTGGGGAGAACCTTCACATCCCAGCTGCGCAGCCCCTGGAGTTTGCCCAGTTCCCCTTCCTGCTGCATGGCCTCCAGGAGACTGCAGACTTCGTGGAGGCCATCGAGGGGGCCCGAGCAGCCTGTGCAGAGGCAGGCCAGGCAGGGGTTCGTGCCTACCCCAGCGGCTCCCCCTTCCTCTTCTGGGAGCAGTATCTGGACCTGTGGCGCTGCTTCTTGCTGGCTGTCTGCATCCTGCTGGTGTGCACCTTCCTAGTCTGTGCCCTGCTGCTGCTCAGCCCCTGGACAGCTGTTCTCATTGTGCTGGTCCTGGCCATGATGACTGTGGAGCTCTTTGGTATCATGGGCTTCCTGGGCATCAAGCTGAGCGCCATCCCCGTGGTGATCCTTGTGGCCTCTGTAGGCATCGGCGTCGAATTCACAGTCCATGTGGCCCTGGGCTTCCTGACCACCCAGGGTAGCCGGAACCTTCGGGCTGTCTGTGCCCTGGAGCACACATTCGCCCCCGTGACCGATGGAGCTGTGTCCACACTGCTGGGTCTGCTCATGCTTGCCGGTTCCAACTTTGACTTCATCGTGAGGTACTTCTTCATGGTGCTGACAGTGCTCACCCTCTTGGGCCTCCTCCATGGACTTGTGCTGCTGCCTGTGCTGCTGTCCATCCTGGGCCCCCCGCCAGAGGTGGTGCAGATGTACAAGGAGAGCCCACAAGTCCTGAGCCCTGCAGCTGCACAGGACAGCGGGCTCAGGTGGGGGTTGTCTCCCAGCCTGCCCCAGAGCTACACCAGAGTGACTACCTCCATGACTGTGGCCTTCCACCCACCCCCACTCCCTGGTGCCTATGTCCACGCAGCCTCTGACGAGTCCACGTGGTCCTCTGTTGCCACTCCAGCTGCCAACACTGCTGGCAACCCCAGCTCTAGGGGGCCATGTCCAGCCACTGAATAA

Related Sequences

XP_004872966.1 Protein

Ptch2 PREDICTED: protein patched homolog 2 isoform X1 [Heterocephalus glaber]

Length: 1207 aa     
>XP_004872966.1
MAGPPPLRELPPDYMPPDSPAASQILTVSLKAPLWLRAYFQRLLFSLGCSIQRHCGKVLFLGLLAFGALALGLRVAIIETDLEQLWVEVGSRVSQELHYTKEKLGEEAAYTSQMLIQTARQEGKNVLTSEALGLHLQAAFTASKVQVSLYGKSWDLNKICYKSGVPLIENGMIERMIEKLFPCVILTPLDCFWEGAKLQGGSAYLPGRPDIQWTNLNPEQLLEELGPFASLEGFRELLDKAQVGQAYVGRPCLDPDDLQCPPTAPNHRSRQAPNVAQELSGGCHGFSHKFMHWQEELLLGGMARDPRGQLLRAEALQSTFLLMSPHQLYEHFRGDYQTHDIGWSEEQAGIVLQAWQRRFVQLAQEALPENSSQQIYAFSSTTLEDILHAFSEVSASRVVGGYLLMLAYACVTMLRWDCAQSQGTVGLAGVLLVALAVASGLGLCAMLGIAFNAATTQVLPFLALGIGVDDIFLMAHAFTKAPPGTPLQERMGECLQRTGTSVALTSINNMVAFFMAALVPIPALRAFSLQAAVVVGCNFTAVMLIFPAILSLDLHRRHCQRLDVLCCFSSPCSARVIQILPQELGNRTLPVGIAHLTTTVQAFTHCEASSQHVVTILPPQAHLVPPPSDPLASELFSPRGSTRDLLDQEEGSRQKPAFKSLPCACWNLAHFARYRFAPLLLQSHAKAMVLVFFGALLALSLYGATLVQDGLALTDVVPRSTKEHAFLSAQLRYFSLYEVAVVTQGGFDYAHSQRALFDLHQRFSSLKAVLPPPATHTPRTWLHYYRNWLQGIQAAFDQDWASGRITRHSYRNGSEDGALAYKLLIQTGNAQEPLDFSQLTTRKLVDKEGLIPPELFYMGLTVWVSSDPLGLAASQANFYPPPPEWLHNRFDTTGENLHIPAAQPLEFAQFPFLLHGLQETADFVEAIEGARAACAEAGQAGVRAYPSGSPFLFWEQYLDLWRCFLLAVCILLVCTFLVCALLLLSPWTAVLIVLVLAMMTVELFGIMGFLGIKLSAIPVVILVASVGIGVEFTVHVALGFLTTQGSRNLRAVCALEHTFAPVTDGAVSTLLGLLMLAGSNFDFIVRYFFMVLTVLTLLGLLHGLVLLPVLLSILGPPPEVVQMYKESPQVLSPAAAQDSGLRWGLSPSLPQSYTRVTTSMTVAFHPPPLPGAYVHAASDESTWSSVATPAANTAGNPSSRGPCPATE