Details from NCBI annotation

Gene Symbol Rnf220
Gene Name ring finger protein 220, transcript variant X3
Entrez Gene ID 101698262

Database interlinks

Part of NW_004624906.1 (Scaffold)

For more information consult the page for NW_004624906.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

RNF220 ENSCPOG00000011998 (Guinea pig)

Gene Details

ring finger protein 220

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000010796, Guinea pig)

Protein Percentage 98.76%
CDS Percentage 94.46%
Ka/Ks Ratio 0.02652 (Ka = 0.0058, Ks = 0.2181)

RNF220 ENSG00000187147 (Human)

Gene Details

ring finger protein 220

External Links

Gene Match (Ensembl Protein ID: ENSP00000347548, Human)

Protein Percentage 98.76%
CDS Percentage 94.58%
Ka/Ks Ratio 0.02755 (Ka = 0.0058, Ks = 0.2107)

Rnf220 ENSMUSG00000028677 (Mouse)

Gene Details

ring finger protein 220

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000030439, Mouse)

Protein Percentage 97.53%
CDS Percentage 92.58%
Ka/Ks Ratio 0.03632 (Ka = 0.0114, Ks = 0.3127)

Rnf220 ENSRNOG00000019236 (Rat)

Gene Details

Protein LOC500532

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000053721, Rat)

Protein Percentage 98.23%
CDS Percentage 92.11%
Ka/Ks Ratio 0.0234 (Ka = 0.0082, Ks = 0.3496)

Genome Location

Sequence Coding sequence

Length: 1701 bp    Location: 313526..544676   Strand: +
>XM_004872893.1
ATGGACTTACACCGGGCAGCCTTCAAGATGGAGAACTCATCCTACCTTCCCAACCCTCTGGCATCCCCAGCACTGATGGTCTTGGCATCCACAGCCGAGGCCAGCCGGGATGCTTCCATCCCTTGTCAGCAGCCACGACCCTTTGGTGTACCTGTCTCAGTAGACAAGGATGTGCATATTCCCTTCACCAACGGCTCCTACACCTTCGCCTCTATGTACCATCGGCAAGGTGGGGTGCCAGGCACTTTTGCCAATCGTGATTTCCCCCCTTCCTTATTACACCTCCACCCTCAGTTTGCTCCCCCTAATCTAGATTGTACCCCAATCAGCATGCTGAATCATAGTGGTGTGGGGGCTTTCCGTCCCTTTGCTTCCACTGAGGACCGGGAAAGCTATCAGTCAGCCTTTACTCCAGCCAAGCGACTTAAGAACTGCCATGACACAGAGTCTCCCCACCTGCGCTTCTCAGATGCAGATGGCAAGGAATATGACTTTGGGACACAGCTGCCATCTAGCTCCCCCGGTTCACTTAAGGTTGATGACACTGGGAAGAAGATTTTTGCGGTCTCTGGCCTCATTTCTGATCGAGAAGCGTCATCTAGCCCAGAGGATCGGAATGACAGATGTAAGAAGAAAGCAGCAGCGTTGTTTGACAACCAGGCCCCAATCTGCCCCATCTGCCAAGTCCTGCTGAGGCCTAGCGACTTGCAGGAGCACATGGAACAGGAACTGGAGCAGCTGGCCCAGCTGCCCACCAGCAAGAATTCCCTTCTGAAGGATGCCATGGCTCCAGGCACCCCCAAGTCCCTCCTATTGTCTGCTTCCATCAAGAGGGAAGGAGAATCTCCGACAGCATCACCACACTCATCTGCCACCGATGACCTGCACCACTCAGACAGATACCAGACCTTCCTGCGAGTGCGAGCCAACCGGCAGACCCGACTGAATGCTCGGATTGGGAAAATGAAACGGAGGAAGCAAGATGAAGGGCAGAGGGAAGGCTCCTGCATAGCTGAGGATGATGCTGTGGACATCGAGCATGAGAACAGCAATCGCTTTGAAGAGTATGAGTGGTGTGGGCAGAAGCGGATACGGGCCACCACTCTCCTGGAAGGTGGCTTCCGAGGCTCTGGCTTCGTCATGTGCAGTGGCAAAGAGAACCCGGACAGTGATGCGGACCTGGATGTGGATGGAGATGACACTCTGGAATATGGGAAGCCACAATACACAGAGGCTGACGTCATCCCCTGCACGGGCGAGGAGCCTGGTGAAGCCAAGGAGAGAGAAGCACTGCGGGGTGCAGTCCTAAATGGTGGCCCTCCCAGCACCCGAATCACACCTGAATTCTCCAAATGGGCCAGTGATGAGATGCCATCCACCAGCAATGGTGAAAGCAGCAAGCAGGAGGCCATGCAGAAGACCTGTAAGAACAGCGACATTGAGAAAATCACCGAGGATTCAACTGTGACCACATTTGAGGCTCTAAAGGCTCGAGTCAGGGAGCTTGAACGGCAGCTATCTCGGGGGGACCGTTACAAATGCCTCATCTGTATGGACTCGTACTCAATGCCCCTAACGTCGATCCAGTGTTGGCACGTGCACTGCGAGGAGTGCTGGCTGCGGACCCTGGGAGCCAAGAAGCTCTGCCCTCAGTGTAACACGATCACAGCACCCGGAGACCTACGGAGGATCTACTTGTGA

Related Sequences

XP_004872950.1 Protein

Rnf220 PREDICTED: E3 ubiquitin-protein ligase RNF220 isoform X3 [Heterocephalus glaber]

Length: 566 aa      View alignments
>XP_004872950.1
MDLHRAAFKMENSSYLPNPLASPALMVLASTAEASRDASIPCQQPRPFGVPVSVDKDVHIPFTNGSYTFASMYHRQGGVPGTFANRDFPPSLLHLHPQFAPPNLDCTPISMLNHSGVGAFRPFASTEDRESYQSAFTPAKRLKNCHDTESPHLRFSDADGKEYDFGTQLPSSSPGSLKVDDTGKKIFAVSGLISDREASSSPEDRNDRCKKKAAALFDNQAPICPICQVLLRPSDLQEHMEQELEQLAQLPTSKNSLLKDAMAPGTPKSLLLSASIKREGESPTASPHSSATDDLHHSDRYQTFLRVRANRQTRLNARIGKMKRRKQDEGQREGSCIAEDDAVDIEHENSNRFEEYEWCGQKRIRATTLLEGGFRGSGFVMCSGKENPDSDADLDVDGDDTLEYGKPQYTEADVIPCTGEEPGEAKEREALRGAVLNGGPPSTRITPEFSKWASDEMPSTSNGESSKQEAMQKTCKNSDIEKITEDSTVTTFEALKARVRELERQLSRGDRYKCLICMDSYSMPLTSIQCWHVHCEECWLRTLGAKKLCPQCNTITAPGDLRRIYL