Details from NCBI annotation

Gene Symbol Tmem53
Gene Name transmembrane protein 53, transcript variant X4
Entrez Gene ID 101697134

Database interlinks

Part of NW_004624906.1 (Scaffold)

For more information consult the page for NW_004624906.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

TMEM53 ENSCPOG00000012006 (Guinea pig)

Gene Details

transmembrane protein 53

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000010803, Guinea pig)

Protein Percentage 86.69%
CDS Percentage 89.69%
Ka/Ks Ratio 0.28525 (Ka = 0.0723, Ks = 0.2534)

TMEM53 ENSG00000126106 (Human)

Gene Details

transmembrane protein 53

External Links

Gene Match (Ensembl Protein ID: ENSP00000361311, Human)

Protein Percentage 85.92%
CDS Percentage 87.85%
Ka/Ks Ratio 0.19184 (Ka = 0.0749, Ks = 0.3904)

Tmem53 ENSMUSG00000048772 (Mouse)

Gene Details

transmembrane protein 53

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000061523, Mouse)

Protein Percentage 86.23%
CDS Percentage 84.3%
Ka/Ks Ratio 0.13473 (Ka = 0.0839, Ks = 0.6229)

Tmem53 ENSRNOG00000019186 (Rat)

Gene Details

transmembrane protein 53 (Tmem53), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000025990, Rat)

Protein Percentage 85.51%
CDS Percentage 84.54%
Ka/Ks Ratio 0.13257 (Ka = 0.0833, Ks = 0.6282)

Genome Location

Sequence Coding sequence

Length: 837 bp    Location: 579803..546711   Strand: -
>XM_004872890.1
ATGGCCCGTGCTGAGCTGGACTACACAATCGAGATCCCGGATCAGCCCTGCTGGAGCCAGAAGGACAACCCCAGCCAAGGTGGGAAGGAGACGAGGACTCGACAGCCTGTGGTGATTCTCTTGGGCTGGGGTGGCTGCAGGGACAAGAATCTTGCCAAGTACAGCACCATCTACCACAAAAGGGGTTGCATCGTGATCCGATACACAGCCCCGTGGCACATGGTCTTCTTCTCTGAGTCCCTGGGTATCCCTTCACTTCGTGTGTTGGCCCAGAAGCTGCTTGAGCTGCTCTTTGATTATGAGATTGAGAGGGAGCCCCTGCTTTTCCACGTGTTCAGCAACGCTGGTGCCATGGTGTATCGCTACGTGCTCGAGCTCCTGCAGACCCATGGGCGGTTCGGCCACCTGCACGTGGTGGGTGCCATCTTTGACAGTGGTCCTGGTGATAGCAACCTAGTAGGGGCCCTGCGGGCCCTATCAGTCATCCTGGAGCACCGACCTGCCATGCTGCGCCTGTTGCTTCTTGTGGCCTTCGCTGTGGTGGCAGTCCTGTTCCACATCCTGCTTGTACCACTCACTGCCCTCTTCCATACCCACTTCTATGACAGGCTACAGGATGCAGACTCCCTCTGGCCTGAGCTCTATCTCTACTCTAGGGCCGATGAGGTAGTCCGGGCCAGGGACGTGGAACGCATGGTGGAGGCACGCCTGGCCCACCCAGTCCTGGTGCGTTCTGTGGACTTTGTGTCATCTGCACATGTCAGTCACCTCCGTGACTACCCTACTTACTACTCGAGCCTCTGTGTCGACTTCATGCACTGCTGTGTCCAGTCCTGA

Related Sequences

XP_004872947.1 Protein

Tmem53 PREDICTED: transmembrane protein 53 isoform X4 [Heterocephalus glaber]

Length: 278 aa      View alignments
>XP_004872947.1
MARAELDYTIEIPDQPCWSQKDNPSQGGKETRTRQPVVILLGWGGCRDKNLAKYSTIYHKRGCIVIRYTAPWHMVFFSESLGIPSLRVLAQKLLELLFDYEIEREPLLFHVFSNAGAMVYRYVLELLQTHGRFGHLHVVGAIFDSGPGDSNLVGALRALSVILEHRPAMLRLLLLVAFAVVAVLFHILLVPLTALFHTHFYDRLQDADSLWPELYLYSRADEVVRARDVERMVEARLAHPVLVRSVDFVSSAHVSHLRDYPTYYSSLCVDFMHCCVQS