Details from NCBI annotation

Gene Symbol Ptcd2
Gene Name pentatricopeptide repeat domain 2
Entrez Gene ID 101722330

Database interlinks

Part of NW_004624905.1 (Scaffold)

For more information consult the page for NW_004624905.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

PTCD2 ENSCPOG00000006217 (Guinea pig)

Gene Details

pentatricopeptide repeat domain 2

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000005608, Guinea pig)

Protein Percentage 81.2%
CDS Percentage 86.95%
Ka/Ks Ratio 0.41474 (Ka = 0.1101, Ks = 0.2654)

PTCD2 ENSG00000049883 (Human)

Gene Details

pentatricopeptide repeat domain 2

External Links

Gene Match (Ensembl Protein ID: ENSP00000370013, Human)

Protein Percentage 75.72%
CDS Percentage 83.64%
Ka/Ks Ratio 0.40856 (Ka = 0.1416, Ks = 0.3466)

Ptcd2 ENSMUSG00000021650 (Mouse)

Gene Details

pentatricopeptide repeat domain 2

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000022153, Mouse)

Protein Percentage 69.29%
CDS Percentage 76.73%
Ka/Ks Ratio 0.34498 (Ka = 0.2055, Ks = 0.5957)

Ptcd2 ENSRNOG00000028403 (Rat)

Gene Details

pentatricopeptide repeat domain 2 (Ptcd2), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000033932, Rat)

Protein Percentage 72.7%
CDS Percentage 78.39%
Ka/Ks Ratio 0.29211 (Ka = 0.1753, Ks = 0.6003)

Genome Location

Sequence Coding sequence

Length: 1152 bp    Location: 1427530..1454418   Strand: +
>XM_004872879.1
ATGGCTACTGCTCTGCAGTCCTTGAGAAAAGTTGGGCTGCTTGCGCCACGGATCTCCCCAAGTCCTTGGGTGGCGAGCCCAGGATCCACTTGCTGCCGCTGCCCTCTCGGAGCTAAAAGATACCTACTTACAGATAGTATTATGAAATTAAAGGAATTTCAACATAAGAAGGTGGCTGTTGCATATAATCTTTCTGGCAACAAAGAAACTTATTTTAGAAACTTGGAAGAGAAATTGACCCAGAACAAACTCATCTTGAAGGACGAGCTGAAAACCTTGCTTCATTTGTGTCAGTCCCAGGAGGACATGGAGCTGGCTAAAAATGTCATTCACAGGTACCATGCAGAAAATAGAAATATGACTTTGGGGGAATATAAATTTGGACCAATTTTCATGAGGCTGTGTTATGAGATGGATCTTGAGGAATTTGCAGTGGAGCTCATCAAAGACCAGCATTTACGAGGTTTCTTTGCAGACCCCACATCATTCAATATTTTGATGGATATGTTATTTATCAAGGAGAAATACGAAAGTGCATTGGAAATATTGATAGAGATGAAAAACCAGGATGTGAAGTTCGCCCAAGATACCTATGTCCTTGCTTTTGCAATTTGCTACAAGCTGAACAGCCCAGAATCTTTTAAAATCTGTACTACATTAAGAGAAGACGCCCTAGTCAAAGGAGACATTGTCTCCAGGAGAGCATCCTGTTTTGCTGTGGCGTTAGCTCTGAATCAGAGTGAAGTGGCCAAAGCTGCATCCATATTTTCTCAAATCATGAATCCAGAGACCATAACCTGCACTAATTTAAATATCATGATCCATATTCAGTCAAATATGTTGGAAACCCTAATAGAGATACTGCAAGGTGCTGCAGAAGGAAATTTATCCAGATTTGTGAAAAGACAGGAGTTCTCTGAGGAAGTGCTGGCCAGAGTGAGGGAAAAAGTGAAGGATGTACCCAACCTTGTGGACCGATTTGAGGACATCTATGAGAAACTACATATACATGGCCATGTGACTTCTTACACTCTTGATGCTCTGCTCTGCCATACCCCCAGGGACAAGAATTCTCATACTCCACTACTAAACAGGAGGAGGGTCAGCCAGCGTACCCTCCAGCCCCTTAGCCAGCCCCTATTTGCCGAGTAA

Related Sequences

XP_004872936.1 Protein

Ptcd2 PREDICTED: pentatricopeptide repeat-containing protein 2, mitochondrial [Heterocephalus glaber]

Length: 383 aa      View alignments
>XP_004872936.1
MATALQSLRKVGLLAPRISPSPWVASPGSTCCRCPLGAKRYLLTDSIMKLKEFQHKKVAVAYNLSGNKETYFRNLEEKLTQNKLILKDELKTLLHLCQSQEDMELAKNVIHRYHAENRNMTLGEYKFGPIFMRLCYEMDLEEFAVELIKDQHLRGFFADPTSFNILMDMLFIKEKYESALEILIEMKNQDVKFAQDTYVLAFAICYKLNSPESFKICTTLREDALVKGDIVSRRASCFAVALALNQSEVAKAASIFSQIMNPETITCTNLNIMIHIQSNMLETLIEILQGAAEGNLSRFVKRQEFSEEVLARVREKVKDVPNLVDRFEDIYEKLHIHGHVTSYTLDALLCHTPRDKNSHTPLLNRRRVSQRTLQPLSQPLFAE