Details from NCBI annotation

Gene Symbol unclassified transcription discrepancy
Gene Name mRNA
Entrez Gene ID 101720200

Database interlinks

Part of NW_004624905.1 (Scaffold)

For more information consult the page for NW_004624905.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

RAD17 ENSCPOG00000000834 (Guinea pig)

Gene Details

RAD17 homolog (S. pombe)

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000000749, Guinea pig)

Protein Percentage 86.75%
CDS Percentage 88.52%
Ka/Ks Ratio 0.27827 (Ka = 0.0812, Ks = 0.2917)

RAD17 ENSG00000152942 (Human)

Gene Details

RAD17 homolog (S. pombe)

External Links

Gene Match (Ensembl Protein ID: ENSP00000426191, Human)

Protein Percentage 82.76%
CDS Percentage 85.77%
Ka/Ks Ratio 0.2581 (Ka = 0.1025, Ks = 0.3972)

Rad17 ENSMUSG00000021635 (Mouse)

Gene Details

RAD17 homolog (S. pombe)

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000022136, Mouse)

Protein Percentage 77.96%
CDS Percentage 82.29%
Ka/Ks Ratio 0.27049 (Ka = 0.1328, Ks = 0.4908)

Rad17 ENSRNOG00000018353 (Rat)

Gene Details

RAD17 homolog (S. pombe) (Rad17), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000024801, Rat)

Protein Percentage 77.67%
CDS Percentage 81.39%
Ka/Ks Ratio 0.2274 (Ka = 0.1316, Ks = 0.5785)

Genome Location

Sequence Coding sequence

Length: 1920 bp    Location: 245006..277362   Strand: +
>XM_004872878.1
ATGCAGATCCAGGAAGGTGAATTATATTTTAATGTACTGCAGGTTGTATATTATGGATGGAAACTGTTAAAGTTTATAATGTCAAAAGCTTTTCTTAGATCAAAGGTAACTTCCATGAAGGTGACAGACTGGGTAGACCCATCATTTGATGATTTTTCAGAAACTACGGCCTTCTCTGCTGTTCCTACCACATCTTTAGGGGTGAATAACTCAAGTCACAGAAGGAAAAATGTGCCTTCCACATTAGAAAGCAGCAGAGCCCCGGCTAGAAAAAGAGGAAATCTGTCTTCCTCAGAACAGATTTATGGTCCAGAAAATTTCAAAGAATATTTGTCTGAAAATGAACCATGGGTAGATAAATATAAACCAGAAACTCAGCATGAACTTGCTGTGCATAAAAAGAAAATTGAAGAAGTTGAAAACTGGTTAAAAGCTGAAGTCTTAGAAAGGCAACCAGAACAGGGTGGATCTATTTTATTAATAACAGGTCCTCCTGGATGTGGAAAAACTACTACTATAAAAATACTGTCAAAGGAACATGGTATAGAAGTACAAGAGTGGATTAATCCAGTTTTACCAGACTTCCAAAAAGATGATTTCAAGGAGATATTTAATTTTGGTAAGGTTTGCTGTGAAGATACTGGAAATAGCAAGAGAAACTTATGCCTAATGGAGCATTCAGATGAAGATTTACCAAACCAGTTTTACCGAGATTCTCATACTTTACATGAAGTTCTAAGGAAGTATGTGCAGATTGGCCGATGTCCTCTTATATTTATAACCTCTGACAGTGTCAGTGGAGATAATCATAGGTTACTATTTCCCAAAGAAATTCAAGAAGAGTGTTCTATCTCAAACATTAGTTTCAACCCTGTGGCACCAACAATTATGATGAAATTTCTAAATCGAATAGTGACTATGGAAGCTAATAAGAATGGAGGAAAAATTATTGTCCCTGATAAAACTTCTCTAGAGTTGCTCTGTCAAGGATATTCTGGTGATATCAGAAGTGCAATAAACAGCCTCCAGTTTTCTTCTTCAAAAGTTAAACACTTCAGAGCTTTGGGGAAAATTCTATATTGTAAAAGAGCACCTTTAACAGAATTAGACTCTCCTCGGTTGCCTTCCCATTTATCAGAGTATGAACGGGATACATTACTTGTTCAGCCTGAGGAAGTCGTAGAAATGTCACACATGCCAGGAGAGTTATTTAATTTATATCTTCACCAAAACTACATAGATTTCTTCGTGGAAGTAGATGATCTTGTAAGAGCCAGTGAATTTCTCAGTTTTGCAGACATCCTCAGTGGTGACTGGAATACACACTCTTCACTCAGGGCATATAGCACATCTGTTGCTACTCGAGGTGTGATCCATTCCAACAGAGCCCGGGGGTTTGCTCACTGCCAAGCAGGGGGATCAAGCTTTCGACCGTTGCACAAACCGCAGTGGTTTCTAATCCATAAGAAGTATCGGAAAAATTGCCTGGCAGCAAAAGCACTTTTTTCTGATTTCTGCCTACCAGCTTTGTGCCTCCAGACTCAACTGTTGCCATATCTCGCACTCCTGACCGTTCCAATGAGAAATCAAGCTCAGATTTCTTTTATCCAAGATATTGGAAGACTTCCTCTGAAACGACACTTTGGAAGGTGGAAGATGGAGGCCCTGGCCGACAGGGAGCACGCCCTGATGGACCCTGACAGCGGAGATGAGGCCCTGCTCGGCAGTGGGGCTCTGCCTACCCCGGATGGGGATGCCCAGGGGGAGCCCCAACCAGCCGCCCAGCCGGAAACGTCTCTGCCGTTGAGCCAGAGCAGTGGGAGCGAGCTGCTGGCCAGCCAGCCCCAGCCCTTCTCGAAGCTGGACATGGAGGACGAGGGCGACGTGATCATAGAAGAGTACGACAGCGACGGGACGTAA

Related Sequences

XP_004872935.1 Protein

unclassified transcription discrepancy PREDICTED: LOW QUALITY PROTEIN: cell cycle checkpoint protein RAD17 [Heterocephalus glaber]

Length: 639 aa      View alignments
>XP_004872935.1
MQIQEGELYFNVLQVVYYGWKLLKFIMSKAFLRSKVTSMKVTDWVDPSFDDFSETTAFSAVPTTSLGVNNSSHRRKNVPSTLESSRAPARKRGNLSSSEQIYGPENFKEYLSENEPWVDKYKPETQHELAVHKKKIEEVENWLKAEVLERQPEQGGSILLITGPPGCGKTTTIKILSKEHGIEVQEWINPVLPDFQKDDFKEIFNFGKVCCEDTGNSKRNLCLMEHSDEDLPNQFYRDSHTLHEVLRKYVQIGRCPLIFITSDSVSGDNHRLLFPKEIQEECSISNISFNPVAPTIMMKFLNRIVTMEANKNGGKIIVPDKTSLELLCQGYSGDIRSAINSLQFSSSKVKHFRALGKILYCKRAPLTELDSPRLPSHLSEYERDTLLVQPEEVVEMSHMPGELFNLYLHQNYIDFFVEVDDLVRASEFLSFADILSGDWNTHSSLRAYSTSVATRGVIHSNRARGFAHCQAGGSSFRPLHKPQWFLIHKKYRKNCLAAKALFSDFCLPALCLQTQLLPYLALLTVPMRNQAQISFIQDIGRLPLKRHFGRWKMEALADREHALMDPDSGDEALLGSGALPTPDGDAQGEPQPAAQPETSLPLSQSSGSELLASQPQPFSKLDMEDEGDVIIEEYDSDGT